RNA–Protein interactions for RNA: ENST00000546588.1

VPS29-203, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-203ENST00000546588 F6UB75 175 aa6.18□□□□□ -1.42
VPS29-203ENST00000546588 ZNF324O75467 553 aaPredicted RBP6.18□□□□□ -1.42
VPS29-203ENST00000546588 LEPP41159 167 aa6.18□□□□□ -1.42
VPS29-203ENST00000546588 TFPI2P48307 235 aa6.18□□□□□ -1.42
VPS29-203ENST00000546588 GTSF1Q8WW33 167 aa6.18□□□□□ -1.42
VPS29-203ENST00000546588 C1QTNF4Q9BXJ3 329 aa6.18□□□□□ -1.42
VPS29-203ENST00000546588 RETNQ9HD89 108 aa6.18□□□□□ -1.42
VPS29-203ENST00000546588 WNK1Q9H4A3 2382 aa6.18□□□□□ -1.42
VPS29-203ENST00000546588 IGHV4-4A0A075B6R2 117 aa6.17□□□□□ -1.42
VPS29-203ENST00000546588 IGKV3D-20A0A0C4DH25 116 aa6.17□□□□□ -1.42
VPS29-203ENST00000546588 CRXO43186 299 aaPredicted RBP6.17□□□□□ -1.42
VPS29-203ENST00000546588 TSPOP30536 169 aa6.17□□□□□ -1.42
VPS29-203ENST00000546588 DEFB131AP59861 70 aa6.17□□□□□ -1.42
VPS29-203ENST00000546588 RPS28P62857 69 aaKnown RBP6.17□□□□□ -1.42
VPS29-203ENST00000546588 EBLN2Q6P2I7 272 aa6.17□□□□□ -1.42
VPS29-203ENST00000546588 TRPT1Q86TN4 253 aaKnown RBP6.17□□□□□ -1.42
VPS29-203ENST00000546588 NUP35Q8NFH5 326 aa6.17□□□□□ -1.42
VPS29-203ENST00000546588 HIST1H2BLQ99880 126 aa6.17□□□□□ -1.42
VPS29-203ENST00000546588 CYSLTR1Q9Y271 337 aa6.17□□□□□ -1.42
VPS29-203ENST00000546588 DNAH3Q8TD57 4116 aa6.16□□□□□ -1.42
VPS29-203ENST00000546588 IGKV3-7A0A075B6H7 116 aa6.16□□□□□ -1.42
VPS29-203ENST00000546588 RBMY1BA6NDE4 496 aaKnown RBP6.16□□□□□ -1.42
VPS29-203ENST00000546588 RBMY1EA6NEQ0 496 aaKnown RBP6.16□□□□□ -1.42
VPS29-203ENST00000546588 HIGD1CA8MV81 97 aa6.16□□□□□ -1.42
VPS29-203ENST00000546588 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.16□□□□□ -1.42
VPS29-203ENST00000546588 MT-ND6P03923 174 aa6.16□□□□□ -1.42
VPS29-203ENST00000546588 OR5AL1P0C617 328 aa6.16□□□□□ -1.42
VPS29-203ENST00000546588 RBMY1DP0C7P1 496 aaKnown RBP6.16□□□□□ -1.42
VPS29-203ENST00000546588 XGP55808 180 aa6.16□□□□□ -1.42
VPS29-203ENST00000546588 DEFB1P60022 68 aa6.16□□□□□ -1.42
VPS29-203ENST00000546588 EGFEM1PQ0D2K5 195 aa6.16□□□□□ -1.42
VPS29-203ENST00000546588 C1orf195Q5TG92 126 aa6.16□□□□□ -1.42
VPS29-203ENST00000546588 ZNF493Q6ZR52 646 aa6.16□□□□□ -1.42
VPS29-203ENST00000546588 NEGR1Q7Z3B1 354 aa6.16□□□□□ -1.42
VPS29-203ENST00000546588 SPATA3Q8NHX4 192 aa6.16□□□□□ -1.42
VPS29-203ENST00000546588 SAMD10Q9BYL1 202 aa6.16□□□□□ -1.42
VPS29-203ENST00000546588 SCRT2Q9NQ03 307 aa6.16□□□□□ -1.42
VPS29-203ENST00000546588 MSRB1Q9NZV6 116 aa6.16□□□□□ -1.42
VPS29-203ENST00000546588 C11orf21Q9P2W6 132 aa6.16□□□□□ -1.42
VPS29-203ENST00000546588 TP53TG1Q9Y2A0 90 aa6.16□□□□□ -1.42
VPS29-203ENST00000546588 VWFP04275 2813 aa6.16□□□□□ -1.42
VPS29-203ENST00000546588 C7orf71A4D174 169 aa6.15□□□□□ -1.42
VPS29-203ENST00000546588 NXPH4O95158 308 aa6.15□□□□□ -1.42
VPS29-203ENST00000546588 CA1P00915 261 aaPredicted RBP6.15□□□□□ -1.42
VPS29-203ENST00000546588 ZNF705DP0CH99 300 aaPredicted RBP6.15□□□□□ -1.42
VPS29-203ENST00000546588 ZNF705BP0CI00 300 aaPredicted RBP6.15□□□□□ -1.42
VPS29-203ENST00000546588 SRIP30626 198 aa6.15□□□□□ -1.42
VPS29-203ENST00000546588 GFI1BQ5VTD9 330 aa6.15□□□□□ -1.42
VPS29-203ENST00000546588 GNB1LQ9BYB4 327 aa6.15□□□□□ -1.42
VPS29-203ENST00000546588 MAST4O15021 2626 aa6.15□□□□□ -1.43
VPS29-203ENST00000546588 MUC4Q99102 2169 aa6.14□□□□□ -1.43
VPS29-203ENST00000546588 F2Z2F3 143 aa6.14□□□□□ -1.43
VPS29-203ENST00000546588 GPX1P07203 203 aa6.14□□□□□ -1.43
VPS29-203ENST00000546588 KCNS1Q96KK3 526 aa6.14□□□□□ -1.43
VPS29-203ENST00000546588 UQCR10Q9UDW1 63 aa6.14□□□□□ -1.43
VPS29-203ENST00000546588 SELENOKQ9Y6D0 94 aa6.14□□□□□ -1.43
VPS29-203ENST00000546588 TRRAPQ9Y4A5 3859 aa6.14□□□□□ -1.43
VPS29-203ENST00000546588 SORL1Q92673 2214 aa6.13□□□□□ -1.43
VPS29-203ENST00000546588 HLA-DQA1P01909 254 aa6.13□□□□□ -1.43
VPS29-203ENST00000546588 CD7P09564 240 aa6.13□□□□□ -1.43
VPS29-203ENST00000546588 HBBP68871 147 aa6.13□□□□□ -1.43
VPS29-203ENST00000546588 CD164Q04900 197 aa6.13□□□□□ -1.43
VPS29-203ENST00000546588 FHL2Q14192 279 aa6.13□□□□□ -1.43
VPS29-203ENST00000546588 C4orf26Q17RF5 130 aa6.13□□□□□ -1.43
VPS29-203ENST00000546588 MORN3Q6PF18 240 aaPredicted RBP6.13□□□□□ -1.43
VPS29-203ENST00000546588 TMEM136Q6ZRR5 245 aa6.13□□□□□ -1.43
VPS29-203ENST00000546588 TMEM256Q8N2U0 113 aa6.13□□□□□ -1.43
VPS29-203ENST00000546588 VAMP8Q9BV40 100 aa6.13□□□□□ -1.43
VPS29-203ENST00000546588 MRPS16Q9Y3D3 137 aaKnown RBP6.13□□□□□ -1.43
VPS29-203ENST00000546588 ATRQ13535 2644 aa6.13□□□□□ -1.43
VPS29-203ENST00000546588 NACAE9PAV3 2078 aa6.13□□□□□ -1.43
VPS29-203ENST00000546588 A0A1B0GUT8 65 aa6.12□□□□□ -1.43
VPS29-203ENST00000546588 KNCNA6PVL3 124 aa6.12□□□□□ -1.43
VPS29-203ENST00000546588 GIG44P09565 113 aaPredicted RBP6.12□□□□□ -1.43
VPS29-203ENST00000546588 RBMY1A1P0DJD3 496 aaKnown RBP6.12□□□□□ -1.43
VPS29-203ENST00000546588 RBMY1CP0DJD4 496 aa6.12□□□□□ -1.43
VPS29-203ENST00000546588 PRB4P10163 310 aaPredicted RBP6.12□□□□□ -1.43
VPS29-203ENST00000546588 RNASE3P12724 160 aaKnown RBP6.12□□□□□ -1.43
VPS29-203ENST00000546588 NTF3P20783 257 aa6.12□□□□□ -1.43
VPS29-203ENST00000546588 RPS10P46783 165 aaKnown RBP6.12□□□□□ -1.43
VPS29-203ENST00000546588 HNRNPA3P51991 378 aaKnown RBP6.12□□□□□ -1.43
VPS29-203ENST00000546588 RBMY1FQ15415 496 aaKnown RBP6.12□□□□□ -1.43
VPS29-203ENST00000546588 COA6Q5JTJ3 125 aaKnown RBP6.12□□□□□ -1.43
VPS29-203ENST00000546588 STPG4Q8N801 248 aa6.12□□□□□ -1.43
VPS29-203ENST00000546588 C3orf56Q8N813 242 aa6.12□□□□□ -1.43
VPS29-203ENST00000546588 C9orf85Q96MD7 179 aa6.12□□□□□ -1.43
VPS29-203ENST00000546588 SETD2Q9BYW2 2564 aaPredicted RBP6.12□□□□□ -1.43
VPS29-203ENST00000546588 PAM16Q9Y3D7 125 aa6.12□□□□□ -1.43
VPS29-203ENST00000546588 HIST1H2BKO60814 126 aa6.11□□□□□ -1.43
VPS29-203ENST00000546588 HIST1H2BJP06899 126 aa6.11□□□□□ -1.43
VPS29-203ENST00000546588 ARMS2P0C7Q2 107 aa6.11□□□□□ -1.43
VPS29-203ENST00000546588 HIST1H2BOP23527 126 aa6.11□□□□□ -1.43
VPS29-203ENST00000546588 HIST1H2BBP33778 126 aa6.11□□□□□ -1.43
VPS29-203ENST00000546588 HIST1H2BDP58876 126 aa6.11□□□□□ -1.43
VPS29-203ENST00000546588 HIST1H2BCP62807 126 aa6.11□□□□□ -1.43
VPS29-203ENST00000546588 CACNG7P62955 275 aa6.11□□□□□ -1.43
VPS29-203ENST00000546588 HIST2H2BEQ16778 126 aa6.11□□□□□ -1.43
VPS29-203ENST00000546588 SPINK13Q1W4C9 94 aa6.11□□□□□ -1.43
VPS29-203ENST00000546588 KRTAP21-3Q3LHN1 58 aa6.11□□□□□ -1.43
VPS29-203ENST00000546588 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 123.2 ms