RNA–Protein interactions for RNA: ENST00000546490.1

CHPT1-202, Transcript of choline phosphotransferase 1, humanhuman

TSL 2

Gene CHPT1, Length 476 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-202ENST00000546490 AP1S3Q96PC3 154 aa12.27□□□□□ -0.45
CHPT1-202ENST00000546490 SSBP4Q9BWG4 385 aaPredicted RBP12.27□□□□□ -0.45
CHPT1-202ENST00000546490 F5H697 171 aa12.26□□□□□ -0.45
CHPT1-202ENST00000546490 ANGP03950 147 aaKnown RBP12.26□□□□□ -0.45
CHPT1-202ENST00000546490 SMIM17P0DL12 118 aa12.26□□□□□ -0.45
CHPT1-202ENST00000546490 TMEM97Q5BJF2 176 aa12.26□□□□□ -0.45
CHPT1-202ENST00000546490 CHCHD5Q9BSY4 110 aa12.26□□□□□ -0.45
CHPT1-202ENST00000546490 MUC21A0A0G2JKD1 596 aa12.25□□□□□ -0.45
CHPT1-202ENST00000546490 MUC21A0A140T8X8 626 aa12.25□□□□□ -0.45
CHPT1-202ENST00000546490 RPL35P42766 123 aaKnown RBP12.25□□□□□ -0.45
CHPT1-202ENST00000546490 TMUB2Q71RG4 321 aa12.25□□□□□ -0.45
CHPT1-202ENST00000546490 MANBALQ9NQG1 85 aa12.25□□□□□ -0.45
CHPT1-202ENST00000546490 ENHOQ6UWT2 76 aa12.24□□□□□ -0.45
CHPT1-202ENST00000546490 DEFB104AQ8WTQ1 72 aa12.24□□□□□ -0.45
CHPT1-202ENST00000546490 CHAC1Q9BUX1 264 aa12.24□□□□□ -0.45
CHPT1-202ENST00000546490 HLA-DQA1P01909 254 aa12.23□□□□□ -0.45
CHPT1-202ENST00000546490 SSTP61278 116 aa12.23□□□□□ -0.45
CHPT1-202ENST00000546490 MIAQ16674 131 aa12.23□□□□□ -0.45
CHPT1-202ENST00000546490 C11orf52Q96A22 123 aa12.23□□□□□ -0.45
CHPT1-202ENST00000546490 VAX2Q9UIW0 290 aa12.23□□□□□ -0.45
CHPT1-202ENST00000546490 GNG13Q9P2W3 67 aa12.22□□□□□ -0.45
CHPT1-202ENST00000546490 CENPWQ5EE01 88 aa12.21□□□□□ -0.45
CHPT1-202ENST00000546490 DERL1Q9BUN8 251 aa12.21□□□□□ -0.45
CHPT1-202ENST00000546490 KIF25-AS1Q9Y6Z4 181 aa12.21□□□□□ -0.45
CHPT1-202ENST00000546490 TRBV25-1A0A075B6N4 114 aa12.2□□□□□ -0.46
CHPT1-202ENST00000546490 CIRBP-AS1Q8TBR5 109 aa12.2□□□□□ -0.46
CHPT1-202ENST00000546490 TPPP3Q9BW30 176 aa12.2□□□□□ -0.46
CHPT1-202ENST00000546490 USP17L23D6RBM5 183 aa12.19□□□□□ -0.46
CHPT1-202ENST00000546490 TEX46H3BTG2 121 aa12.19□□□□□ -0.46
CHPT1-202ENST00000546490 H7C1H1 209 aa12.19□□□□□ -0.46
CHPT1-202ENST00000546490 MGPP08493 103 aa12.19□□□□□ -0.46
CHPT1-202ENST00000546490 RPS20P60866 119 aaKnown RBP12.19□□□□□ -0.46
CHPT1-202ENST00000546490 NTM-AS1Q6ZSK4 140 aa12.19□□□□□ -0.46
CHPT1-202ENST00000546490 FER1L6-AS1Q8NA97 138 aa12.19□□□□□ -0.46
CHPT1-202ENST00000546490 DAZAP1Q96EP5 407 aaKnown RBP12.19□□□□□ -0.46
CHPT1-202ENST00000546490 TRAV1-1A0A0B4J248 108 aa12.18□□□□□ -0.46
CHPT1-202ENST00000546490 KRTAP29-1A8MX34 341 aaPredicted RBP12.18□□□□□ -0.46
CHPT1-202ENST00000546490 IGLC6P0CF74 106 aa12.18□□□□□ -0.46
CHPT1-202ENST00000546490 RAB5CP51148 216 aa12.18□□□□□ -0.46
CHPT1-202ENST00000546490 RBX1P62877 108 aa12.18□□□□□ -0.46
CHPT1-202ENST00000546490 GAGE6Q13070 117 aa12.18□□□□□ -0.46
CHPT1-202ENST00000546490 CLPSL2Q6UWE3 100 aa12.18□□□□□ -0.46
CHPT1-202ENST00000546490 OR2D3Q8NGH3 330 aa12.18□□□□□ -0.46
CHPT1-202ENST00000546490 SMIM12Q96EX1 92 aa12.18□□□□□ -0.46
CHPT1-202ENST00000546490 PRR34Q9NV39 138 aa12.18□□□□□ -0.46
CHPT1-202ENST00000546490 IGHV1-24A0A0C4DH33 117 aa12.17□□□□□ -0.46
CHPT1-202ENST00000546490 IGLV2-8P01709 118 aa12.17□□□□□ -0.46
CHPT1-202ENST00000546490 GZMBP10144 247 aa12.17□□□□□ -0.46
CHPT1-202ENST00000546490 CACNG7P62955 275 aa12.17□□□□□ -0.46
CHPT1-202ENST00000546490 CCL20P78556 96 aa12.17□□□□□ -0.46
CHPT1-202ENST00000546490 IQCJQ1A5X6 159 aa12.17□□□□□ -0.46
CHPT1-202ENST00000546490 EIF5AL1Q6IS14 154 aaKnown RBP12.17□□□□□ -0.46
CHPT1-202ENST00000546490 XKRY2A2RUG3 117 aa12.16□□□□□ -0.46
CHPT1-202ENST00000546490 GNG4P50150 75 aa12.16□□□□□ -0.46
CHPT1-202ENST00000546490 LINC00269Q8N2A0 174 aa12.16□□□□□ -0.46
CHPT1-202ENST00000546490 M0QY20 66 aa12.15□□□□□ -0.46
CHPT1-202ENST00000546490 MEF2BQ02080 365 aaPredicted RBP12.15□□□□□ -0.46
CHPT1-202ENST00000546490 SUMO4Q6EEV6 95 aa12.15□□□□□ -0.46
CHPT1-202ENST00000546490 C19orf71A6NCJ1 209 aa12.14□□□□□ -0.47
CHPT1-202ENST00000546490 PDE6DO43924 150 aa12.14□□□□□ -0.47
CHPT1-202ENST00000546490 IFNA1P01562 189 aa12.14□□□□□ -0.47
CHPT1-202ENST00000546490 P01737 135 aa12.14□□□□□ -0.47
CHPT1-202ENST00000546490 TRGC1P0CF51 173 aa12.14□□□□□ -0.47
CHPT1-202ENST00000546490 DGAT2L7PQ6IED9 249 aa12.14□□□□□ -0.47
CHPT1-202ENST00000546490 F2Z2F3 143 aa12.13□□□□□ -0.47
CHPT1-202ENST00000546490 PRSS1P07477 247 aa12.13□□□□□ -0.47
CHPT1-202ENST00000546490 KRTAP10-4P60372 401 aaPredicted RBP12.13□□□□□ -0.47
CHPT1-202ENST00000546490 BIN3Q9NQY0 253 aa12.13□□□□□ -0.47
CHPT1-202ENST00000546490 LRP1Q07954 4544 aaKnown RBP12.12□□□□□ -0.47
CHPT1-202ENST00000546490 RAB19A4D1S5 217 aa12.12□□□□□ -0.47
CHPT1-202ENST00000546490 SULT1A2P50226 295 aa12.12□□□□□ -0.47
CHPT1-202ENST00000546490 NKX2-5P52952 324 aaPredicted RBP12.12□□□□□ -0.47
CHPT1-202ENST00000546490 REG3AQ06141 175 aa12.12□□□□□ -0.47
CHPT1-202ENST00000546490 RASL11AQ6T310 242 aa12.12□□□□□ -0.47
CHPT1-202ENST00000546490 PKHD1L1Q86WI1 4243 aa12.12□□□□□ -0.47
CHPT1-202ENST00000546490 FAT3Q8TDW7 4589 aa12.11□□□□□ -0.47
CHPT1-202ENST00000546490 TMEM243Q9BU79 118 aa12.11□□□□□ -0.47
CHPT1-202ENST00000546490 DPH3P1Q9H4G8 78 aa12.11□□□□□ -0.47
CHPT1-202ENST00000546490 MED9Q9NWA0 146 aa12.11□□□□□ -0.47
CHPT1-202ENST00000546490 TRBV20OR9-2A0A075B6H5 130 aa12.1□□□□□ -0.47
CHPT1-202ENST00000546490 BCL2P10415 239 aa12.1□□□□□ -0.47
CHPT1-202ENST00000546490 KRTAP26-1Q6PEX3 210 aa12.1□□□□□ -0.47
CHPT1-202ENST00000546490 C9orf163Q8N9P6 203 aa12.1□□□□□ -0.47
CHPT1-202ENST00000546490 PGLYRP4Q96LB8 373 aa12.1□□□□□ -0.47
CHPT1-202ENST00000546490 IGLV10-54A0A075B6I4 117 aa12.09□□□□□ -0.47
CHPT1-202ENST00000546490 TRAV8-4A0A0B4J246 113 aa12.09□□□□□ -0.47
CHPT1-202ENST00000546490 RPL37AP61513 92 aaKnown RBP12.09□□□□□ -0.47
CHPT1-202ENST00000546490 LYZL1Q6UWQ5 148 aa12.09□□□□□ -0.47
CHPT1-202ENST00000546490 CLRN3Q8NCR9 226 aa12.09□□□□□ -0.47
CHPT1-202ENST00000546490 A0A1B0GUV1 79 aa12.08□□□□□ -0.48
CHPT1-202ENST00000546490 UBE2L6O14933 153 aa12.08□□□□□ -0.48
CHPT1-202ENST00000546490 CTRLP40313 264 aa12.08□□□□□ -0.48
CHPT1-202ENST00000546490 C20orf203Q8NBC4 194 aa12.08□□□□□ -0.48
CHPT1-202ENST00000546490 NIT2Q9NQR4 276 aa12.08□□□□□ -0.48
CHPT1-202ENST00000546490 OXTP01178 125 aa12.07□□□□□ -0.48
CHPT1-202ENST00000546490 NTF3P20783 257 aa12.07□□□□□ -0.48
CHPT1-202ENST00000546490 TAGLN2P37802 199 aaKnown RBP12.07□□□□□ -0.48
CHPT1-202ENST00000546490 COTL1Q14019 142 aa12.06□□□□□ -0.48
CHPT1-202ENST00000546490 WDR73Q6P4I2 378 aa12.06□□□□□ -0.48
CHPT1-202ENST00000546490 IGLV4-60A0A075B6I1 120 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 94.7 ms