RNA–Protein interactions for RNA: ENST00000546073.5

CD9-211, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 1,072 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-211ENST00000546073 NUP35Q8NFH5 326 aa12.01□□□□□ -0.49
CD9-211ENST00000546073 NIT2Q9NQR4 276 aa12.01□□□□□ -0.49
CD9-211ENST00000546073 NACAE9PAV3 2078 aa12.01□□□□□ -0.49
CD9-211ENST00000546073 SMIM27A0A1W2PRY6 76 aa12□□□□□ -0.49
CD9-211ENST00000546073 UBE2D3P61077 147 aa12□□□□□ -0.49
CD9-211ENST00000546073 UBE2D2P62837 147 aa12□□□□□ -0.49
CD9-211ENST00000546073 C6orf223Q8N319 242 aa12□□□□□ -0.49
CD9-211ENST00000546073 TMEM191AQ9H0A3 160 aa12□□□□□ -0.49
CD9-211ENST00000546073 LINC00862A6NCI5 91 aa11.99□□□□□ -0.49
CD9-211ENST00000546073 M0QY20 66 aa11.99□□□□□ -0.49
CD9-211ENST00000546073 PPP1R17O96001 155 aa11.99□□□□□ -0.49
CD9-211ENST00000546073 NDUFA5Q16718 116 aa11.99□□□□□ -0.49
CD9-211ENST00000546073 NFE4Q86UQ8 179 aa11.99□□□□□ -0.49
CD9-211ENST00000546073 SEC11CQ9BY50 192 aa11.99□□□□□ -0.49
CD9-211ENST00000546073 KMT2CQ8NEZ4 4911 aaKnown RBP11.98□□□□□ -0.49
CD9-211ENST00000546073 A0A087WX48 190 aa11.98□□□□□ -0.49
CD9-211ENST00000546073 TMEM262E9PQX1 116 aa11.98□□□□□ -0.49
CD9-211ENST00000546073 ELOBQ15370 118 aa11.98□□□□□ -0.49
CD9-211ENST00000546073 Q6ZR54 194 aa11.98□□□□□ -0.49
CD9-211ENST00000546073 WFDC10BQ8IUB3 73 aa11.98□□□□□ -0.49
CD9-211ENST00000546073 DNAH10OSP0CZ25 163 aa11.97□□□□□ -0.49
CD9-211ENST00000546073 CAMPP49913 170 aa11.97□□□□□ -0.49
CD9-211ENST00000546073 LINC00315P59091 139 aa11.97□□□□□ -0.49
CD9-211ENST00000546073 CTDSP1Q9GZU7 261 aa11.97□□□□□ -0.49
CD9-211ENST00000546073 DYNC2H1Q8NCM8 4307 aaKnown RBP11.96□□□□□ -0.49
CD9-211ENST00000546073 PLECQ15149 4684 aaKnown RBP11.96□□□□□ -0.49
CD9-211ENST00000546073 LINC00694P0DN24 101 aa11.96□□□□□ -0.49
CD9-211ENST00000546073 S100PP25815 95 aa11.96□□□□□ -0.49
CD9-211ENST00000546073 HBBP68871 147 aa11.96□□□□□ -0.49
CD9-211ENST00000546073 LINC01556Q5JQF7 62 aa11.96□□□□□ -0.49
CD9-211ENST00000546073 MRAP2Q96G30 205 aa11.96□□□□□ -0.49
CD9-211ENST00000546073 CHCHD5Q9BSY4 110 aa11.96□□□□□ -0.49
CD9-211ENST00000546073 TRBV25-1A0A075B6N4 114 aa11.95□□□□□ -0.5
CD9-211ENST00000546073 TRBV6-8A0A0A6YYG3 113 aa11.95□□□□□ -0.5
CD9-211ENST00000546073 ATP5L2Q7Z4Y8 100 aa11.95□□□□□ -0.5
CD9-211ENST00000546073 ALMS1Q8TCU4 4167 aa11.95□□□□□ -0.5
CD9-211ENST00000546073 IGHV1-24A0A0C4DH33 117 aa11.94□□□□□ -0.5
CD9-211ENST00000546073 UBE2L6O14933 153 aa11.94□□□□□ -0.5
CD9-211ENST00000546073 IGHV3-30P01768 117 aa11.94□□□□□ -0.5
CD9-211ENST00000546073 IGHV3-33P01772 117 aa11.94□□□□□ -0.5
CD9-211ENST00000546073 IGHV3-30-3P0DP02 117 aa11.94□□□□□ -0.5
CD9-211ENST00000546073 IGHV3-30-5P0DP03 117 aa11.94□□□□□ -0.5
CD9-211ENST00000546073 COTL1Q14019 142 aa11.94□□□□□ -0.5
CD9-211ENST00000546073 MRPL54Q6P161 138 aaKnown RBP11.94□□□□□ -0.5
CD9-211ENST00000546073 CHCHD7Q9BUK0 85 aa11.94□□□□□ -0.5
CD9-211ENST00000546073 Q9UF83 564 aa11.94□□□□□ -0.5
CD9-211ENST00000546073 PRSS29PA6NIE9 313 aa11.93□□□□□ -0.5
CD9-211ENST00000546073 EREGO14944 169 aa11.93□□□□□ -0.5
CD9-211ENST00000546073 GATD1Q8NB37 220 aa11.93□□□□□ -0.5
CD9-211ENST00000546073 BTF3L4Q96K17 158 aa11.93□□□□□ -0.5
CD9-211ENST00000546073 ST20Q9HBF5 79 aa11.93□□□□□ -0.5
CD9-211ENST00000546073 TRAV26-2A0A0B4J265 109 aa11.92□□□□□ -0.5
CD9-211ENST00000546073 PSCAO43653 123 aa11.92□□□□□ -0.5
CD9-211ENST00000546073 RAB4AP20338 218 aa11.92□□□□□ -0.5
CD9-211ENST00000546073 PMCHP20382 165 aa11.92□□□□□ -0.5
CD9-211ENST00000546073 AMN1Q8IY45 258 aa11.92□□□□□ -0.5
CD9-211ENST00000546073 IMMP2LQ96T52 175 aa11.92□□□□□ -0.5
CD9-211ENST00000546073 CKS2P33552 79 aa11.91□□□□□ -0.5
CD9-211ENST00000546073 RMI2Q96E14 147 aa11.91□□□□□ -0.5
CD9-211ENST00000546073 TRAV8-3A0A0A6YYJ7 113 aa11.9□□□□□ -0.5
CD9-211ENST00000546073 TMEM243Q9BU79 118 aa11.9□□□□□ -0.5
CD9-211ENST00000546073 TM2D2Q9BX73 214 aa11.9□□□□□ -0.5
CD9-211ENST00000546073 LYSTQ99698 3801 aa11.89□□□□□ -0.51
CD9-211ENST00000546073 NCR2O95944 276 aa11.89□□□□□ -0.51
CD9-211ENST00000546073 AMTP48728 403 aa11.89□□□□□ -0.51
CD9-211ENST00000546073 FAM104BQ5XKR9 115 aa11.89□□□□□ -0.51
CD9-211ENST00000546073 NIT1Q86X76 327 aa11.89□□□□□ -0.51
CD9-211ENST00000546073 SDHAF1A6NFY7 115 aa11.88□□□□□ -0.51
CD9-211ENST00000546073 IBA57-AS1B1ANH7 110 aa11.88□□□□□ -0.51
CD9-211ENST00000546073 I3L3M4 83 aa11.88□□□□□ -0.51
CD9-211ENST00000546073 CRPP02741 224 aa11.88□□□□□ -0.51
CD9-211ENST00000546073 PPBPP02775 128 aa11.88□□□□□ -0.51
CD9-211ENST00000546073 ADCYAP1P18509 176 aa11.88□□□□□ -0.51
CD9-211ENST00000546073 LAGE3Q14657 143 aa11.88□□□□□ -0.51
CD9-211ENST00000546073 RHEBQ15382 184 aa11.88□□□□□ -0.51
CD9-211ENST00000546073 RPL39LQ96EH5 51 aaKnown RBP11.88□□□□□ -0.51
CD9-211ENST00000546073 RPS10P5Q9NQ39 176 aa11.88□□□□□ -0.51
CD9-211ENST00000546073 COX11Q9Y6N1 276 aa11.88□□□□□ -0.51
CD9-211ENST00000546073 SNAPINO95295 136 aa11.87□□□□□ -0.51
CD9-211ENST00000546073 APCSP02743 223 aa11.87□□□□□ -0.51
CD9-211ENST00000546073 FCER1GP30273 86 aa11.87□□□□□ -0.51
CD9-211ENST00000546073 SMAGPQ0VAQ4 97 aa11.87□□□□□ -0.51
CD9-211ENST00000546073 Q0VG73 95 aa11.87□□□□□ -0.51
CD9-211ENST00000546073 IQCJQ1A5X6 159 aa11.87□□□□□ -0.51
CD9-211ENST00000546073 SVBPQ8N300 66 aa11.87□□□□□ -0.51
CD9-211ENST00000546073 Q9HAA7 133 aa11.87□□□□□ -0.51
CD9-211ENST00000546073 CARHSP1Q9Y2V2 147 aaKnown RBP11.87□□□□□ -0.51
CD9-211ENST00000546073 TRAV9-1A0A075B6T8 112 aa11.86□□□□□ -0.51
CD9-211ENST00000546073 TRBV6-5A0A0K0K1A5 114 aa11.86□□□□□ -0.51
CD9-211ENST00000546073 VCYO14598 125 aa11.86□□□□□ -0.51
CD9-211ENST00000546073 RTL8CO15255 209 aa11.86□□□□□ -0.51
CD9-211ENST00000546073 TCAPO15273 167 aa11.86□□□□□ -0.51
CD9-211ENST00000546073 APOC3P02656 99 aa11.86□□□□□ -0.51
CD9-211ENST00000546073 ANGP03950 147 aaKnown RBP11.86□□□□□ -0.51
CD9-211ENST00000546073 AMMECR1LQ6DCA0 310 aa11.86□□□□□ -0.51
CD9-211ENST00000546073 RNF185Q96GF1 192 aa11.86□□□□□ -0.51
CD9-211ENST00000546073 KIR2DL4Q99706 377 aa11.86□□□□□ -0.51
CD9-211ENST00000546073 TMEM242Q9NWH2 141 aa11.86□□□□□ -0.51
CD9-211ENST00000546073 GAGE6Q13070 117 aa11.85□□□□□ -0.51
CD9-211ENST00000546073 MRPL51Q4U2R6 128 aaKnown RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms