RNA–Protein interactions for RNA: ENST00000546006.5

CCDC189-212, Transcript of coiled-coil domain containing 189, humanhuman

TSL 2

Gene CCDC189, Length 1,533 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC189-212ENST00000546006 RPL36AP83881 106 aaKnown RBP12.85□□□□□ -0.35
CCDC189-212ENST00000546006 ELOBQ15370 118 aa12.85□□□□□ -0.35
CCDC189-212ENST00000546006 SH2D6Q7Z4S9 175 aa12.85□□□□□ -0.35
CCDC189-212ENST00000546006 ZNRF2Q8NHG8 242 aa12.85□□□□□ -0.35
CCDC189-212ENST00000546006 RPL36ALQ969Q0 106 aaKnown RBP12.85□□□□□ -0.35
CCDC189-212ENST00000546006 ALMS1Q8TCU4 4167 aa12.84□□□□□ -0.35
CCDC189-212ENST00000546006 TRBV7-3A0A075B6L6 115 aa12.84□□□□□ -0.35
CCDC189-212ENST00000546006 NEGR1Q7Z3B1 354 aa12.84□□□□□ -0.35
CCDC189-212ENST00000546006 MRAP2Q96G30 205 aa12.84□□□□□ -0.35
CCDC189-212ENST00000546006 SMCO4Q9NRQ5 59 aa12.84□□□□□ -0.35
CCDC189-212ENST00000546006 DNAH1Q9P2D7 4330 aa12.83□□□□□ -0.35
CCDC189-212ENST00000546006 MRPL51Q4U2R6 128 aaKnown RBP12.83□□□□□ -0.35
CCDC189-212ENST00000546006 DNAJC30Q96LL9 226 aa12.83□□□□□ -0.35
CCDC189-212ENST00000546006 NIT2Q9NQR4 276 aa12.83□□□□□ -0.35
CCDC189-212ENST00000546006 KMT2CQ8NEZ4 4911 aaKnown RBP12.83□□□□□ -0.36
CCDC189-212ENST00000546006 VPS13DQ5THJ4 4388 aa12.83□□□□□ -0.36
CCDC189-212ENST00000546006 TGIF2-C20orf24A0A0A6YYL0 155 aa12.83□□□□□ -0.36
CCDC189-212ENST00000546006 TMEM136Q6ZRR5 245 aa12.83□□□□□ -0.36
CCDC189-212ENST00000546006 CBLN2Q8IUK8 224 aa12.83□□□□□ -0.36
CCDC189-212ENST00000546006 TNFRSF18Q9Y5U5 241 aa12.83□□□□□ -0.36
CCDC189-212ENST00000546006 TRBV24-1A0A075B6N3 115 aa12.82□□□□□ -0.36
CCDC189-212ENST00000546006 ATP6V1G1O75348 118 aa12.82□□□□□ -0.36
CCDC189-212ENST00000546006 UBE2D3P61077 147 aa12.82□□□□□ -0.36
CCDC189-212ENST00000546006 UBE2D2P62837 147 aa12.82□□□□□ -0.36
CCDC189-212ENST00000546006 ESRGQ1W209 222 aa12.82□□□□□ -0.36
CCDC189-212ENST00000546006 ATP6V0E2Q8NHE4 81 aa12.82□□□□□ -0.36
CCDC189-212ENST00000546006 YPEL4Q96NS1 127 aa12.82□□□□□ -0.36
CCDC189-212ENST00000546006 GAS8-AS1O95177 125 aa12.81□□□□□ -0.36
CCDC189-212ENST00000546006 COX19Q49B96 90 aa12.81□□□□□ -0.36
CCDC189-212ENST00000546006 LYPD5Q6UWN5 251 aa12.81□□□□□ -0.36
CCDC189-212ENST00000546006 RPL39LQ96EH5 51 aaKnown RBP12.81□□□□□ -0.36
CCDC189-212ENST00000546006 SMKR1H3BMG3 65 aa12.8□□□□□ -0.36
CCDC189-212ENST00000546006 NCR2O95944 276 aa12.8□□□□□ -0.36
CCDC189-212ENST00000546006 S100A1P23297 94 aa12.8□□□□□ -0.36
CCDC189-212ENST00000546006 CCL18P55774 89 aa12.8□□□□□ -0.36
CCDC189-212ENST00000546006 GNB1LQ9BYB4 327 aa12.8□□□□□ -0.36
CCDC189-212ENST00000546006 CKS2P33552 79 aa12.79□□□□□ -0.36
CCDC189-212ENST00000546006 LGALS9CQ6DKI2 356 aa12.79□□□□□ -0.36
CCDC189-212ENST00000546006 HLA-DQA1P01909 254 aa12.78□□□□□ -0.36
CCDC189-212ENST00000546006 RPS10P46783 165 aaKnown RBP12.78□□□□□ -0.36
CCDC189-212ENST00000546006 TIRAPP58753 221 aa12.78□□□□□ -0.36
CCDC189-212ENST00000546006 OR10J3Q5JRS4 329 aa12.78□□□□□ -0.36
CCDC189-212ENST00000546006 GTSF1LQ9H1H1 148 aa12.78□□□□□ -0.36
CCDC189-212ENST00000546006 LINC00588Q9Y4M8 146 aa12.78□□□□□ -0.36
CCDC189-212ENST00000546006 SACSQ9NZJ4 4579 aa12.78□□□□□ -0.36
CCDC189-212ENST00000546006 TRBV6-5A0A0K0K1A5 114 aa12.78□□□□□ -0.36
CCDC189-212ENST00000546006 D6R8Y8 96 aa12.78□□□□□ -0.36
CCDC189-212ENST00000546006 PPP1R17O96001 155 aa12.78□□□□□ -0.36
CCDC189-212ENST00000546006 PPBPP02775 128 aa12.78□□□□□ -0.36
CCDC189-212ENST00000546006 DAZ4Q86SG3 579 aaKnown RBP12.78□□□□□ -0.36
CCDC189-212ENST00000546006 UBE2DNLQ8IWF7 75 aa12.78□□□□□ -0.36
CCDC189-212ENST00000546006 NRACQ8N912 160 aa12.78□□□□□ -0.36
CCDC189-212ENST00000546006 LINC00476Q8WZB0 136 aa12.78□□□□□ -0.36
CCDC189-212ENST00000546006 DAZ3Q9NR90 486 aaKnown RBP12.78□□□□□ -0.36
CCDC189-212ENST00000546006 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.77□□□□□ -0.37
CCDC189-212ENST00000546006 IGHV3-38A0A0C4DH36 116 aa12.76□□□□□ -0.37
CCDC189-212ENST00000546006 APCSP02743 223 aa12.76□□□□□ -0.37
CCDC189-212ENST00000546006 MT-ND6P03923 174 aa12.76□□□□□ -0.37
CCDC189-212ENST00000546006 ORMDL3Q8N138 153 aa12.76□□□□□ -0.37
CCDC189-212ENST00000546006 MRPS16Q9Y3D3 137 aaKnown RBP12.76□□□□□ -0.37
CCDC189-212ENST00000546006 LY6G6CO95867 125 aa12.75□□□□□ -0.37
CCDC189-212ENST00000546006 ST20Q9HBF5 79 aa12.75□□□□□ -0.37
CCDC189-212ENST00000546006 SDHAF1A6NFY7 115 aa12.74□□□□□ -0.37
CCDC189-212ENST00000546006 SCO1O75880 301 aa12.74□□□□□ -0.37
CCDC189-212ENST00000546006 TNFRSF6BO95407 300 aa12.73□□□□□ -0.37
CCDC189-212ENST00000546006 LELP1Q5T871 98 aa12.73□□□□□ -0.37
CCDC189-212ENST00000546006 PRELID3AQ96N28 172 aa12.73□□□□□ -0.37
CCDC189-212ENST00000546006 UPK3BQ9BT76 320 aa12.73□□□□□ -0.37
CCDC189-212ENST00000546006 MRPL18Q9H0U6 180 aaKnown RBP12.73□□□□□ -0.37
CCDC189-212ENST00000546006 PHOX2AO14813 284 aa12.72□□□□□ -0.37
CCDC189-212ENST00000546006 NPYP01303 97 aa12.72□□□□□ -0.37
CCDC189-212ENST00000546006 SUMO2P61956 95 aaKnown RBP12.72□□□□□ -0.37
CCDC189-212ENST00000546006 C20orf78Q9BR46 151 aa12.72□□□□□ -0.37
CCDC189-212ENST00000546006 TMEM70Q9BUB7 260 aa12.72□□□□□ -0.37
CCDC189-212ENST00000546006 TRAPPC1Q9Y5R8 145 aa12.72□□□□□ -0.37
CCDC189-212ENST00000546006 POLR2KP53803 58 aaKnown RBP12.72□□□□□ -0.37
CCDC189-212ENST00000546006 KIAA1644Q3SXP7 199 aa12.72□□□□□ -0.37
CCDC189-212ENST00000546006 TMEM97Q5BJF2 176 aa12.72□□□□□ -0.37
CCDC189-212ENST00000546006 LAMTOR2Q9Y2Q5 125 aa12.72□□□□□ -0.37
CCDC189-212ENST00000546006 LCE6AA0A183 80 aa12.71□□□□□ -0.38
CCDC189-212ENST00000546006 FABP9Q0Z7S8 132 aa12.71□□□□□ -0.38
CCDC189-212ENST00000546006 DNAH6Q9C0G6 4158 aa12.7□□□□□ -0.38
CCDC189-212ENST00000546006 TRBV6-8A0A0A6YYG3 113 aa12.7□□□□□ -0.38
CCDC189-212ENST00000546006 TRBV27A0A0K0K1C4 114 aa12.7□□□□□ -0.38
CCDC189-212ENST00000546006 I3L3M4 83 aa12.7□□□□□ -0.38
CCDC189-212ENST00000546006 NTM-AS1Q6ZSK4 140 aa12.7□□□□□ -0.38
CCDC189-212ENST00000546006 TRAV8-6A0A0B4J262 113 aa12.69□□□□□ -0.38
CCDC189-212ENST00000546006 COLCA2A8K830 154 aa12.69□□□□□ -0.38
CCDC189-212ENST00000546006 VCYO14598 125 aa12.69□□□□□ -0.38
CCDC189-212ENST00000546006 PMCHP20382 165 aa12.69□□□□□ -0.38
CCDC189-212ENST00000546006 COTL1Q14019 142 aa12.69□□□□□ -0.38
CCDC189-212ENST00000546006 HYDINQ4G0P3 5121 aa12.69□□□□□ -0.38
CCDC189-212ENST00000546006 KMT2AQ03164 3969 aa12.69□□□□□ -0.38
CCDC189-212ENST00000546006 RPL32P62910 135 aaKnown RBP12.68□□□□□ -0.38
CCDC189-212ENST00000546006 DEFB104AQ8WTQ1 72 aa12.68□□□□□ -0.38
CCDC189-212ENST00000546006 WFDC10BQ8IUB3 73 aa12.67□□□□□ -0.38
CCDC189-212ENST00000546006 Q9H8V8 135 aa12.67□□□□□ -0.38
CCDC189-212ENST00000546006 RYR3Q15413 4870 aa12.67□□□□□ -0.38
CCDC189-212ENST00000546006 RYR2Q92736 4967 aa12.67□□□□□ -0.38
CCDC189-212ENST00000546006 TRBV25-1A0A075B6N4 114 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms