RNA–Protein interactions for RNA: ENST00000545493.1

SCARB1-210, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-210ENST00000545493 MPV17L2Q567V2 206 aa13.87□□□□□ -0.19
SCARB1-210ENST00000545493 SULT1A2P50226 295 aa13.86□□□□□ -0.19
SCARB1-210ENST00000545493 ELOBQ15370 118 aa13.86□□□□□ -0.19
SCARB1-210ENST00000545493 KCNIP4Q6PIL6 250 aa13.86□□□□□ -0.19
SCARB1-210ENST00000545493 DMBT1Q9UGM3 2413 aaPredicted RBP13.86□□□□□ -0.19
SCARB1-210ENST00000545493 C19orf71A6NCJ1 209 aa13.85□□□□□ -0.19
SCARB1-210ENST00000545493 FAM229AH3BQW9 127 aa13.85□□□□□ -0.19
SCARB1-210ENST00000545493 LINC01620Q4KN68 170 aa13.85□□□□□ -0.19
SCARB1-210ENST00000545493 TCTE3Q8IZS6 198 aa13.85□□□□□ -0.19
SCARB1-210ENST00000545493 VAX2Q9UIW0 290 aa13.85□□□□□ -0.19
SCARB1-210ENST00000545493 FLG2Q5D862 2391 aaPredicted RBP13.85□□□□□ -0.19
SCARB1-210ENST00000545493 LRP1Q07954 4544 aaKnown RBP13.84□□□□□ -0.19
SCARB1-210ENST00000545493 TRBV20OR9-2A0A075B6H5 130 aa13.84□□□□□ -0.19
SCARB1-210ENST00000545493 RAB19A4D1S5 217 aa13.84□□□□□ -0.19
SCARB1-210ENST00000545493 F5H697 171 aa13.84□□□□□ -0.19
SCARB1-210ENST00000545493 MEF2BQ02080 365 aaPredicted RBP13.84□□□□□ -0.19
SCARB1-210ENST00000545493 EIF5AL1Q6IS14 154 aaKnown RBP13.84□□□□□ -0.19
SCARB1-210ENST00000545493 ENHOQ6UWT2 76 aa13.84□□□□□ -0.19
SCARB1-210ENST00000545493 NTM-AS1Q6ZSK4 140 aa13.84□□□□□ -0.19
SCARB1-210ENST00000545493 TMEM262E9PQX1 116 aa13.83□□□□□ -0.2
SCARB1-210ENST00000545493 Q0VG73 95 aa13.83□□□□□ -0.2
SCARB1-210ENST00000545493 C15orf54Q8N8G6 183 aa13.83□□□□□ -0.2
SCARB1-210ENST00000545493 FER1L6-AS1Q8NA97 138 aa13.83□□□□□ -0.2
SCARB1-210ENST00000545493 OR2D3Q8NGH3 330 aa13.83□□□□□ -0.2
SCARB1-210ENST00000545493 TPPP3Q9BW30 176 aa13.83□□□□□ -0.2
SCARB1-210ENST00000545493 PKHD1L1Q86WI1 4243 aa13.83□□□□□ -0.2
SCARB1-210ENST00000545493 SMIM17P0DL12 118 aa13.82□□□□□ -0.2
SCARB1-210ENST00000545493 BCL2P10415 239 aa13.82□□□□□ -0.2
SCARB1-210ENST00000545493 GNG4P50150 75 aa13.82□□□□□ -0.2
SCARB1-210ENST00000545493 Q8N976 141 aa13.82□□□□□ -0.2
SCARB1-210ENST00000545493 SMIM12Q96EX1 92 aa13.82□□□□□ -0.2
SCARB1-210ENST00000545493 TEX46H3BTG2 121 aa13.81□□□□□ -0.2
SCARB1-210ENST00000545493 PDE6DO43924 150 aa13.81□□□□□ -0.2
SCARB1-210ENST00000545493 CRPP02741 224 aa13.81□□□□□ -0.2
SCARB1-210ENST00000545493 MGPP08493 103 aa13.81□□□□□ -0.2
SCARB1-210ENST00000545493 CHCHD5Q9BSY4 110 aa13.81□□□□□ -0.2
SCARB1-210ENST00000545493 C1orf43Q9BWL3 253 aa13.81□□□□□ -0.2
SCARB1-210ENST00000545493 IFNA1P01562 189 aa13.8□□□□□ -0.2
SCARB1-210ENST00000545493 RPS20P60866 119 aaKnown RBP13.8□□□□□ -0.2
SCARB1-210ENST00000545493 SUMO4Q6EEV6 95 aa13.8□□□□□ -0.2
SCARB1-210ENST00000545493 DAZAP1Q96EP5 407 aaKnown RBP13.8□□□□□ -0.2
SCARB1-210ENST00000545493 M0QY20 66 aa13.79□□□□□ -0.2
SCARB1-210ENST00000545493 ANGP03950 147 aaKnown RBP13.79□□□□□ -0.2
SCARB1-210ENST00000545493 SCXQ7RTU7 201 aa13.79□□□□□ -0.2
SCARB1-210ENST00000545493 SLC51BQ86UW2 128 aa13.79□□□□□ -0.2
SCARB1-210ENST00000545493 LINC00528Q8N1L1 170 aa13.79□□□□□ -0.2
SCARB1-210ENST00000545493 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.79□□□□□ -0.2
SCARB1-210ENST00000545493 P01737 135 aa13.78□□□□□ -0.2
SCARB1-210ENST00000545493 PKIAP61925 76 aa13.78□□□□□ -0.2
SCARB1-210ENST00000545493 CACNG7P62955 275 aa13.78□□□□□ -0.2
SCARB1-210ENST00000545493 TMEM97Q5BJF2 176 aa13.78□□□□□ -0.2
SCARB1-210ENST00000545493 MED9Q9NWA0 146 aa13.78□□□□□ -0.2
SCARB1-210ENST00000545493 GAGE6Q13070 117 aa13.77□□□□□ -0.21
SCARB1-210ENST00000545493 TRBV25-1A0A075B6N4 114 aa13.76□□□□□ -0.21
SCARB1-210ENST00000545493 HLA-DQA1P01909 254 aa13.76□□□□□ -0.21
SCARB1-210ENST00000545493 RBX1P62877 108 aa13.76□□□□□ -0.21
SCARB1-210ENST00000545493 IQCJQ1A5X6 159 aa13.76□□□□□ -0.21
SCARB1-210ENST00000545493 CLPSL2Q6UWE3 100 aa13.76□□□□□ -0.21
SCARB1-210ENST00000545493 PRR34Q9NV39 138 aa13.76□□□□□ -0.21
SCARB1-210ENST00000545493 CTRLP40313 264 aa13.75□□□□□ -0.21
SCARB1-210ENST00000545493 MIAQ16674 131 aa13.75□□□□□ -0.21
SCARB1-210ENST00000545493 LYZL1Q6UWQ5 148 aa13.75□□□□□ -0.21
SCARB1-210ENST00000545493 H7C1H1 209 aa13.74□□□□□ -0.21
SCARB1-210ENST00000545493 IGHV1-24A0A0C4DH33 117 aa13.73□□□□□ -0.21
SCARB1-210ENST00000545493 XKRY2A2RUG3 117 aa13.73□□□□□ -0.21
SCARB1-210ENST00000545493 USP17L23D6RBM5 183 aa13.73□□□□□ -0.21
SCARB1-210ENST00000545493 TRGC1P0CF51 173 aa13.73□□□□□ -0.21
SCARB1-210ENST00000545493 NKX2-5P52952 324 aaPredicted RBP13.73□□□□□ -0.21
SCARB1-210ENST00000545493 C14orf177Q52M58 125 aa13.73□□□□□ -0.21
SCARB1-210ENST00000545493 KRTAP26-1Q6PEX3 210 aa13.73□□□□□ -0.21
SCARB1-210ENST00000545493 C9orf62Q8N4C0 152 aa13.73□□□□□ -0.21
SCARB1-210ENST00000545493 F2Z2F3 143 aa13.72□□□□□ -0.21
SCARB1-210ENST00000545493 K7EN84 100 aa13.72□□□□□ -0.21
SCARB1-210ENST00000545493 Q6ZNX1 250 aa13.72□□□□□ -0.21
SCARB1-210ENST00000545493 LINC00269Q8N2A0 174 aa13.72□□□□□ -0.21
SCARB1-210ENST00000545493 NUDT10Q8NFP7 164 aa13.72□□□□□ -0.21
SCARB1-210ENST00000545493 NUDT11Q96G61 164 aa13.72□□□□□ -0.21
SCARB1-210ENST00000545493 CHAC1Q9BUX1 264 aa13.72□□□□□ -0.21
SCARB1-210ENST00000545493 DPH3P1Q9H4G8 78 aa13.72□□□□□ -0.21
SCARB1-210ENST00000545493 BIN3Q9NQY0 253 aa13.72□□□□□ -0.21
SCARB1-210ENST00000545493 PLA2G1BP04054 148 aaKnown RBP13.71□□□□□ -0.21
SCARB1-210ENST00000545493 RASL11AQ6T310 242 aa13.71□□□□□ -0.21
SCARB1-210ENST00000545493 CNFNQ9BYD5 112 aa13.71□□□□□ -0.21
SCARB1-210ENST00000545493 RNASE7Q9H1E1 156 aaKnown RBP13.71□□□□□ -0.21
SCARB1-210ENST00000545493 NTF3P20783 257 aa13.7□□□□□ -0.22
SCARB1-210ENST00000545493 TAGLN2P37802 199 aaKnown RBP13.7□□□□□ -0.22
SCARB1-210ENST00000545493 C20orf203Q8NBC4 194 aa13.7□□□□□ -0.22
SCARB1-210ENST00000545493 CIRBP-AS1Q8TBR5 109 aa13.7□□□□□ -0.22
SCARB1-210ENST00000545493 RPP21Q9H633 154 aaKnown RBP13.7□□□□□ -0.22
SCARB1-210ENST00000545493 KRTAP10-4P60372 401 aaPredicted RBP13.69□□□□□ -0.22
SCARB1-210ENST00000545493 PRSS1P07477 247 aa13.68□□□□□ -0.22
SCARB1-210ENST00000545493 PGLYRP4Q96LB8 373 aa13.68□□□□□ -0.22
SCARB1-210ENST00000545493 GFRA4Q9GZZ7 299 aa13.68□□□□□ -0.22
SCARB1-210ENST00000545493 REG3AQ06141 175 aa13.67□□□□□ -0.22
SCARB1-210ENST00000545493 WDR73Q6P4I2 378 aa13.67□□□□□ -0.22
SCARB1-210ENST00000545493 AKAP14Q86UN6 197 aa13.67□□□□□ -0.22
SCARB1-210ENST00000545493 OCC1Q8TAD7 63 aa13.67□□□□□ -0.22
SCARB1-210ENST00000545493 DEFB104AQ8WTQ1 72 aa13.67□□□□□ -0.22
SCARB1-210ENST00000545493 TMEM243Q9BU79 118 aa13.67□□□□□ -0.22
SCARB1-210ENST00000545493 NIT2Q9NQR4 276 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 117.8 ms