RNA–Protein interactions for RNA: ENST00000544909.5

PAAF1-215, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 1 (best) BASIC

Gene PAAF1, Length 1,802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-215ENST00000544909 CR1P17927 2039 aa9.14□□□□□ -0.95
PAAF1-215ENST00000544909 AGRNO00468 2067 aa9.14□□□□□ -0.95
PAAF1-215ENST00000544909 IGKV3-20P01619 116 aa9.14□□□□□ -0.95
PAAF1-215ENST00000544909 P0DMU3 169 aa9.14□□□□□ -0.95
PAAF1-215ENST00000544909 FAM231AP0DMU4 169 aa9.14□□□□□ -0.95
PAAF1-215ENST00000544909 FAM231CP0DMU5 169 aa9.14□□□□□ -0.95
PAAF1-215ENST00000544909 RNF151Q2KHN1 245 aa9.14□□□□□ -0.95
PAAF1-215ENST00000544909 BEAN1Q3B7T3 259 aa9.14□□□□□ -0.95
PAAF1-215ENST00000544909 ZNF843Q8N446 348 aa9.14□□□□□ -0.95
PAAF1-215ENST00000544909 ZNRF2Q8NHG8 242 aa9.14□□□□□ -0.95
PAAF1-215ENST00000544909 RAX2Q96IS3 184 aa9.14□□□□□ -0.95
PAAF1-215ENST00000544909 AMELXQ99217 191 aa9.14□□□□□ -0.95
PAAF1-215ENST00000544909 NAA38Q9BRA0 125 aaKnown RBP9.14□□□□□ -0.95
PAAF1-215ENST00000544909 TMEM223A0PJW6 202 aa9.13□□□□□ -0.95
PAAF1-215ENST00000544909 LGALS3P17931 250 aaKnown RBP9.13□□□□□ -0.95
PAAF1-215ENST00000544909 TMEM170BQ5T4T1 132 aa9.13□□□□□ -0.95
PAAF1-215ENST00000544909 TMEM61Q8N0U2 210 aa9.13□□□□□ -0.95
PAAF1-215ENST00000544909 VCX2Q9H322 139 aa9.13□□□□□ -0.95
PAAF1-215ENST00000544909 IGLV4-3A0A075B6K6 122 aa9.12□□□□□ -0.95
PAAF1-215ENST00000544909 INSP01308 110 aa9.12□□□□□ -0.95
PAAF1-215ENST00000544909 SLURP1P55000 103 aa9.12□□□□□ -0.95
PAAF1-215ENST00000544909 MRPS36P82909 103 aaKnown RBP9.12□□□□□ -0.95
PAAF1-215ENST00000544909 DYNLRB2Q8TF09 96 aa9.12□□□□□ -0.95
PAAF1-215ENST00000544909 DOPEY2Q9Y3R5 2298 aa9.12□□□□□ -0.95
PAAF1-215ENST00000544909 UBR5O95071 2799 aaPredicted RBP9.12□□□□□ -0.95
PAAF1-215ENST00000544909 CELSR1Q9NYQ6 3014 aa9.12□□□□□ -0.95
PAAF1-215ENST00000544909 TRBV20-1A0A075B6N2 111 aa9.12□□□□□ -0.95
PAAF1-215ENST00000544909 RBMY1A1P0DJD3 496 aaKnown RBP9.12□□□□□ -0.95
PAAF1-215ENST00000544909 RBMY1CP0DJD4 496 aa9.12□□□□□ -0.95
PAAF1-215ENST00000544909 RBMY1FQ15415 496 aaKnown RBP9.12□□□□□ -0.95
PAAF1-215ENST00000544909 DEFB114Q30KQ6 69 aa9.12□□□□□ -0.95
PAAF1-215ENST00000544909 MAP6D1Q9H9H5 199 aa9.12□□□□□ -0.95
PAAF1-215ENST00000544909 TNFRSF18Q9Y5U5 241 aa9.12□□□□□ -0.95
PAAF1-215ENST00000544909 VPS13CQ709C8 3753 aa9.11□□□□□ -0.95
PAAF1-215ENST00000544909 IGHV3-53P01767 116 aa9.11□□□□□ -0.95
PAAF1-215ENST00000544909 IGHV3-30P01768 117 aa9.11□□□□□ -0.95
PAAF1-215ENST00000544909 IGHV3-30-5P0DP03 117 aa9.11□□□□□ -0.95
PAAF1-215ENST00000544909 CMC4P56277 68 aaPredicted RBP9.11□□□□□ -0.95
PAAF1-215ENST00000544909 UBE2D3P61077 147 aa9.11□□□□□ -0.95
PAAF1-215ENST00000544909 UBE2D2P62837 147 aa9.11□□□□□ -0.95
PAAF1-215ENST00000544909 FHL3Q13643 280 aa9.11□□□□□ -0.95
PAAF1-215ENST00000544909 DUX3Q96PT4 197 aa9.11□□□□□ -0.95
PAAF1-215ENST00000544909 MRPL16Q9NX20 251 aaKnown RBP9.11□□□□□ -0.95
PAAF1-215ENST00000544909 NAV2Q8IVL1 2488 aa9.11□□□□□ -0.95
PAAF1-215ENST00000544909 LRRK2Q5S007 2527 aa9.11□□□□□ -0.95
PAAF1-215ENST00000544909 TMEM238C9JI98 176 aa9.1□□□□□ -0.95
PAAF1-215ENST00000544909 SAP30O75446 220 aa9.1□□□□□ -0.95
PAAF1-215ENST00000544909 ZNF22P17026 224 aaPredicted RBP9.1□□□□□ -0.95
PAAF1-215ENST00000544909 GAGE13Q4V321 117 aa9.1□□□□□ -0.95
PAAF1-215ENST00000544909 MAPK1IP1LQ8NDC0 245 aa9.1□□□□□ -0.95
PAAF1-215ENST00000544909 ATP6V0E2Q8NHE4 81 aa9.1□□□□□ -0.95
PAAF1-215ENST00000544909 Q96MF0 132 aa9.1□□□□□ -0.95
PAAF1-215ENST00000544909 PGPEP1Q9NXJ5 209 aa9.1□□□□□ -0.95
PAAF1-215ENST00000544909 ZFHX3Q15911 3703 aa9.1□□□□□ -0.95
PAAF1-215ENST00000544909 FAM208BQ5VWN6 2430 aa9.1□□□□□ -0.95
PAAF1-215ENST00000544909 PTPN13Q12923 2485 aa9.1□□□□□ -0.95
PAAF1-215ENST00000544909 KNCNA6PVL3 124 aa9.1□□□□□ -0.95
PAAF1-215ENST00000544909 NDUFA11Q86Y39 141 aa9.1□□□□□ -0.95
PAAF1-215ENST00000544909 KRTAP1-3Q8IUG1 177 aa9.1□□□□□ -0.95
PAAF1-215ENST00000544909 C11orf72Q8NBR9 251 aa9.1□□□□□ -0.95
PAAF1-215ENST00000544909 FAM110AQ9BQ89 295 aa9.1□□□□□ -0.95
PAAF1-215ENST00000544909 TIMM21Q9BVV7 248 aa9.1□□□□□ -0.95
PAAF1-215ENST00000544909 SELENOKQ9Y6D0 94 aa9.1□□□□□ -0.95
PAAF1-215ENST00000544909 CELSR2Q9HCU4 2923 aa9.09□□□□□ -0.95
PAAF1-215ENST00000544909 ZNF462Q96JM2 2506 aa9.09□□□□□ -0.95
PAAF1-215ENST00000544909 RBMY1BA6NDE4 496 aaKnown RBP9.09□□□□□ -0.95
PAAF1-215ENST00000544909 RBMY1EA6NEQ0 496 aaKnown RBP9.09□□□□□ -0.95
PAAF1-215ENST00000544909 RBMY1DP0C7P1 496 aaKnown RBP9.09□□□□□ -0.95
PAAF1-215ENST00000544909 COTL1Q14019 142 aa9.09□□□□□ -0.95
PAAF1-215ENST00000544909 CFAP126Q5VTH2 177 aa9.09□□□□□ -0.95
PAAF1-215ENST00000544909 C10orf126Q8N4M7 172 aa9.09□□□□□ -0.95
PAAF1-215ENST00000544909 KLHL30-AS1Q8NEE0 82 aa9.09□□□□□ -0.95
PAAF1-215ENST00000544909 RNF183Q96D59 192 aa9.09□□□□□ -0.95
PAAF1-215ENST00000544909 PRO0461Q9UI25 63 aa9.09□□□□□ -0.95
PAAF1-215ENST00000544909 USP24Q9UPU5 2620 aa9.09□□□□□ -0.95
PAAF1-215ENST00000544909 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.08□□□□□ -0.96
PAAF1-215ENST00000544909 A0A0B4J2C4 111 aa9.08□□□□□ -0.96
PAAF1-215ENST00000544909 TINCRA0A1B0GVN0 87 aa9.08□□□□□ -0.96
PAAF1-215ENST00000544909 TSPEAR-AS2P59090 65 aa9.08□□□□□ -0.96
PAAF1-215ENST00000544909 RPL24P83731 157 aaKnown RBP9.08□□□□□ -0.96
PAAF1-215ENST00000544909 BBC3Q96PG8 261 aaPredicted RBP9.08□□□□□ -0.96
PAAF1-215ENST00000544909 RS1O15537 224 aa9.08□□□□□ -0.96
PAAF1-215ENST00000544909 CD28P10747 220 aa9.08□□□□□ -0.96
PAAF1-215ENST00000544909 SMAGPQ0VAQ4 97 aa9.08□□□□□ -0.96
PAAF1-215ENST00000544909 DEFB136Q30KP8 78 aa9.08□□□□□ -0.96
PAAF1-215ENST00000544909 TRBV10-1A0A0K0K1A3 114 aa9.07□□□□□ -0.96
PAAF1-215ENST00000544909 H3BMG7 143 aa9.07□□□□□ -0.96
PAAF1-215ENST00000544909 M0QXV9 152 aa9.07□□□□□ -0.96
PAAF1-215ENST00000544909 TSPAN13O95857 204 aa9.07□□□□□ -0.96
PAAF1-215ENST00000544909 Q6ZSV7 163 aa9.07□□□□□ -0.96
PAAF1-215ENST00000544909 IL17DQ8TAD2 202 aa9.07□□□□□ -0.96
PAAF1-215ENST00000544909 TEX48A0A1B0GUV7 120 aa9.06□□□□□ -0.96
PAAF1-215ENST00000544909 CIDEAO60543 219 aa9.06□□□□□ -0.96
PAAF1-215ENST00000544909 EMP1P54849 157 aa9.06□□□□□ -0.96
PAAF1-215ENST00000544909 KRTAP10-9P60411 292 aa9.06□□□□□ -0.96
PAAF1-215ENST00000544909 LINC01587Q99440 93 aa9.06□□□□□ -0.96
PAAF1-215ENST00000544909 PRO1854Q9UHT4 67 aa9.06□□□□□ -0.96
PAAF1-215ENST00000544909 FBN2P35556 2912 aa9.06□□□□□ -0.96
PAAF1-215ENST00000544909 PRB1P04280 392 aa9.05□□□□□ -0.96
PAAF1-215ENST00000544909 C18orf65Q6ZTR6 163 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms