RNA–Protein interactions for RNA: ENST00000543660.1

NPIPB4-219, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 5

Gene NPIPB4, Length 353 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-219ENST00000543660 NMSQ5H8A3 153 aa3.12□□□□□ -1.91
NPIPB4-219ENST00000543660 LINC01556Q5JQF7 62 aa3.12□□□□□ -1.91
NPIPB4-219ENST00000543660 GOLT1AQ6ZVE7 132 aa3.12□□□□□ -1.91
NPIPB4-219ENST00000543660 OR5H6Q8NGV6 325 aa3.12□□□□□ -1.91
NPIPB4-219ENST00000543660 OR5H2Q8NGV7 314 aa3.12□□□□□ -1.91
NPIPB4-219ENST00000543660 RBPMSQ93062 196 aaKnown RBP3.12□□□□□ -1.91
NPIPB4-219ENST00000543660 KCNS1Q96KK3 526 aa3.12□□□□□ -1.91
NPIPB4-219ENST00000543660 TMEM243Q9BU79 118 aa3.12□□□□□ -1.91
NPIPB4-219ENST00000543660 PAXXQ9BUH6 204 aa3.12□□□□□ -1.91
NPIPB4-219ENST00000543660 CCDC32Q9BV29 185 aa3.12□□□□□ -1.91
NPIPB4-219ENST00000543660 GNB1LQ9BYB4 327 aa3.12□□□□□ -1.91
NPIPB4-219ENST00000543660 MRPL32Q9BYC8 188 aaKnown RBP3.12□□□□□ -1.91
NPIPB4-219ENST00000543660 IGKV1OR2-108A0A075B7D4 117 aa3.11□□□□□ -1.91
NPIPB4-219ENST00000543660 C8orf87E5RJ46 101 aa3.11□□□□□ -1.91
NPIPB4-219ENST00000543660 SERF1AO75920 110 aa3.11□□□□□ -1.91
NPIPB4-219ENST00000543660 IGHV3-53P01767 116 aa3.11□□□□□ -1.91
NPIPB4-219ENST00000543660 ESDP10768 282 aa3.11□□□□□ -1.91
NPIPB4-219ENST00000543660 GATA2P23769 480 aaPredicted RBP3.11□□□□□ -1.91
NPIPB4-219ENST00000543660 SRIP30626 198 aa3.11□□□□□ -1.91
NPIPB4-219ENST00000543660 AKR1C3P42330 323 aa3.11□□□□□ -1.91
NPIPB4-219ENST00000543660 INPP1P49441 399 aa3.11□□□□□ -1.91
NPIPB4-219ENST00000543660 MP68P56378 58 aa3.11□□□□□ -1.91
NPIPB4-219ENST00000543660 CXCL6P80162 114 aa3.11□□□□□ -1.91
NPIPB4-219ENST00000543660 FABP9Q0Z7S8 132 aa3.11□□□□□ -1.91
NPIPB4-219ENST00000543660 ERCC8Q13216 396 aa3.11□□□□□ -1.91
NPIPB4-219ENST00000543660 SURF2Q15527 256 aaPredicted RBP3.11□□□□□ -1.91
NPIPB4-219ENST00000543660 SCGB2B2Q4G0G5 96 aa3.11□□□□□ -1.91
NPIPB4-219ENST00000543660 TMEM78Q5T7P6 136 aa3.11□□□□□ -1.91
NPIPB4-219ENST00000543660 PACRGLQ8N7B6 248 aa3.11□□□□□ -1.91
NPIPB4-219ENST00000543660 MBD3L1Q8WWY6 194 aa3.11□□□□□ -1.91
NPIPB4-219ENST00000543660 GPR82Q96P67 336 aa3.11□□□□□ -1.91
NPIPB4-219ENST00000543660 TIMM17AQ99595 171 aa3.11□□□□□ -1.91
NPIPB4-219ENST00000543660 PYGO2Q9BRQ0 406 aa3.11□□□□□ -1.91
NPIPB4-219ENST00000543660 VCXQ9H320 206 aa3.11□□□□□ -1.91
NPIPB4-219ENST00000543660 DUSP21Q9H596 190 aa3.11□□□□□ -1.91
NPIPB4-219ENST00000543660 NDUFB11Q9NX14 153 aa3.11□□□□□ -1.91
NPIPB4-219ENST00000543660 DHRS4-AS1Q9P1J3 65 aa3.11□□□□□ -1.91
NPIPB4-219ENST00000543660 LAMTOR3Q9UHA4 124 aa3.11□□□□□ -1.91
NPIPB4-219ENST00000543660 PKIGQ9Y2B9 76 aa3.11□□□□□ -1.91
NPIPB4-219ENST00000543660 TRAV12-3A0A0B4J271 114 aa3.1□□□□□ -1.91
NPIPB4-219ENST00000543660 C3orf85A0A1B0GTC6 90 aa3.1□□□□□ -1.91
NPIPB4-219ENST00000543660 ZNF253O75346 499 aa3.1□□□□□ -1.91
NPIPB4-219ENST00000543660 PFN1P07737 140 aaKnown RBP3.1□□□□□ -1.91
NPIPB4-219ENST00000543660 FGF6P10767 208 aa3.1□□□□□ -1.91
NPIPB4-219ENST00000543660 SP6Q3SY56 376 aa3.1□□□□□ -1.91
NPIPB4-219ENST00000543660 ZNF431Q8TF32 576 aaPredicted RBP3.1□□□□□ -1.91
NPIPB4-219ENST00000543660 RPUSD4Q96CM3 377 aaKnown RBP3.1□□□□□ -1.91
NPIPB4-219ENST00000543660 TMEM101Q96IK0 257 aa3.1□□□□□ -1.91
NPIPB4-219ENST00000543660 DNAJC30Q96LL9 226 aa3.1□□□□□ -1.91
NPIPB4-219ENST00000543660 LINC01600Q96MT4 127 aa3.1□□□□□ -1.91
NPIPB4-219ENST00000543660 CAMK2N2Q96S95 79 aa3.1□□□□□ -1.91
NPIPB4-219ENST00000543660 TRGV9Q99603 122 aa3.1□□□□□ -1.91
NPIPB4-219ENST00000543660 VGLL1Q99990 258 aa3.1□□□□□ -1.91
NPIPB4-219ENST00000543660 UQCC1Q9NVA1 299 aa3.1□□□□□ -1.91
NPIPB4-219ENST00000543660 SCN3BQ9NY72 215 aa3.1□□□□□ -1.91
NPIPB4-219ENST00000543660 CACNG5Q9UF02 275 aa3.1□□□□□ -1.91
NPIPB4-219ENST00000543660 BORCS7-ASMTA0A0B4J1R7 106 aa3.09□□□□□ -1.91
NPIPB4-219ENST00000543660 A0A0J9YXY3 114 aa3.09□□□□□ -1.91
NPIPB4-219ENST00000543660 A0A1W2PRE2 83 aa3.09□□□□□ -1.91
NPIPB4-219ENST00000543660 CEBPZOSA8MTT3 80 aa3.09□□□□□ -1.91
NPIPB4-219ENST00000543660 HMGB3O15347 200 aaKnown RBP3.09□□□□□ -1.91
NPIPB4-219ENST00000543660 RGS5O15539 181 aa3.09□□□□□ -1.91
NPIPB4-219ENST00000543660 CFDP00746 253 aaPredicted RBP3.09□□□□□ -1.91
NPIPB4-219ENST00000543660 ORM2P19652 201 aa3.09□□□□□ -1.91
NPIPB4-219ENST00000543660 CCR6P51684 374 aa3.09□□□□□ -1.91
NPIPB4-219ENST00000543660 PIGPP57054 158 aa3.09□□□□□ -1.91
NPIPB4-219ENST00000543660 LINC01547P58512 204 aaPredicted RBP3.09□□□□□ -1.91
NPIPB4-219ENST00000543660 KRTAP10-8P60410 259 aa3.09□□□□□ -1.91
NPIPB4-219ENST00000543660 GABARAPL2P60520 117 aa3.09□□□□□ -1.91
NPIPB4-219ENST00000543660 GNG5P63218 68 aa3.09□□□□□ -1.91
NPIPB4-219ENST00000543660 ATP5L2Q7Z4Y8 100 aa3.09□□□□□ -1.91
NPIPB4-219ENST00000543660 ANKRD29Q8N6D5 301 aa3.09□□□□□ -1.91
NPIPB4-219ENST00000543660 OR10G4Q8NGN3 311 aa3.09□□□□□ -1.91
NPIPB4-219ENST00000543660 LHFPL5Q8TAF8 219 aa3.09□□□□□ -1.91
NPIPB4-219ENST00000543660 TMEM126AQ9H061 195 aa3.09□□□□□ -1.91
NPIPB4-219ENST00000543660 TXNL4BQ9NX01 149 aaKnown RBP3.09□□□□□ -1.91
NPIPB4-219ENST00000543660 MRPL16Q9NX20 251 aaKnown RBP3.09□□□□□ -1.91
NPIPB4-219ENST00000543660 U3KQ87 197 aa3.09□□□□□ -1.91
NPIPB4-219ENST00000543660 TRGV4A0A0C4DH28 118 aa3.08□□□□□ -1.92
NPIPB4-219ENST00000543660 B4DEV8 164 aa3.08□□□□□ -1.92
NPIPB4-219ENST00000543660 NDUFC2-KCTD14E9PQ53 114 aa3.08□□□□□ -1.92
NPIPB4-219ENST00000543660 H3BRN7 92 aa3.08□□□□□ -1.92
NPIPB4-219ENST00000543660 GABARAPH6UMI1 98 aa3.08□□□□□ -1.92
NPIPB4-219ENST00000543660 CDS2O95674 445 aa3.08□□□□□ -1.92
NPIPB4-219ENST00000543660 IGHV3-30P01768 117 aa3.08□□□□□ -1.92
NPIPB4-219ENST00000543660 IGHV3-33P01772 117 aa3.08□□□□□ -1.92
NPIPB4-219ENST00000543660 SFTA3P0C7M3 94 aa3.08□□□□□ -1.92
NPIPB4-219ENST00000543660 IGHV3-30-3P0DP02 117 aa3.08□□□□□ -1.92
NPIPB4-219ENST00000543660 IGHV3-30-5P0DP03 117 aa3.08□□□□□ -1.92
NPIPB4-219ENST00000543660 RPL7P18124 248 aaKnown RBP3.08□□□□□ -1.92
NPIPB4-219ENST00000543660 S100PP25815 95 aa3.08□□□□□ -1.92
NPIPB4-219ENST00000543660 SDC2P34741 201 aa3.08□□□□□ -1.92
NPIPB4-219ENST00000543660 RPS28P62857 69 aaKnown RBP3.08□□□□□ -1.92
NPIPB4-219ENST00000543660 REG3AQ06141 175 aa3.08□□□□□ -1.92
NPIPB4-219ENST00000543660 ZNF846Q147U1 533 aa3.08□□□□□ -1.92
NPIPB4-219ENST00000543660 IBA57Q5T440 356 aaKnown RBP3.08□□□□□ -1.92
NPIPB4-219ENST00000543660 Q8N976 141 aa3.08□□□□□ -1.92
NPIPB4-219ENST00000543660 TXNDC17Q9BRA2 123 aa3.08□□□□□ -1.92
NPIPB4-219ENST00000543660 SHANK2-AS3Q9BTD1 123 aa3.08□□□□□ -1.92
NPIPB4-219ENST00000543660 TMEM147Q9BVK8 224 aa3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms