RNA–Protein interactions for RNA: ENST00000543542.1

LTBR-212, Transcript of lymphotoxin beta receptor, humanhuman

TSL 2

Gene LTBR, Length 367 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-212ENST00000543542 C10orf91Q5T1B1 145 aa4.37□□□□□ -1.71
LTBR-212ENST00000543542 RASL11AQ6T310 242 aa4.37□□□□□ -1.71
LTBR-212ENST00000543542 NEXN-AS1Q8NBZ9 246 aa4.37□□□□□ -1.71
LTBR-212ENST00000543542 BTF3L4Q96K17 158 aa4.37□□□□□ -1.71
LTBR-212ENST00000543542 DNAJC30Q96LL9 226 aa4.37□□□□□ -1.71
LTBR-212ENST00000543542 TMEM191AQ9H0A3 160 aa4.37□□□□□ -1.71
LTBR-212ENST00000543542 GTSF1LQ9H1H1 148 aa4.37□□□□□ -1.71
LTBR-212ENST00000543542 MRPS16Q9Y3D3 137 aaKnown RBP4.37□□□□□ -1.71
LTBR-212ENST00000543542 LYSTQ99698 3801 aa4.36□□□□□ -1.71
LTBR-212ENST00000543542 M0QY20 66 aa4.36□□□□□ -1.71
LTBR-212ENST00000543542 SIVA1O15304 175 aa4.36□□□□□ -1.71
LTBR-212ENST00000543542 LINC00315P59091 139 aa4.36□□□□□ -1.71
LTBR-212ENST00000543542 ATP5L2Q7Z4Y8 100 aa4.36□□□□□ -1.71
LTBR-212ENST00000543542 AMN1Q8IY45 258 aa4.36□□□□□ -1.71
LTBR-212ENST00000543542 GATD1Q8NB37 220 aa4.36□□□□□ -1.71
LTBR-212ENST00000543542 MRAP2Q96G30 205 aa4.36□□□□□ -1.71
LTBR-212ENST00000543542 IMMP2LQ96T52 175 aa4.36□□□□□ -1.71
LTBR-212ENST00000543542 Q9H8V8 135 aa4.36□□□□□ -1.71
LTBR-212ENST00000543542 NIT2Q9NQR4 276 aa4.36□□□□□ -1.71
LTBR-212ENST00000543542 Q9UF83 564 aa4.36□□□□□ -1.71
LTBR-212ENST00000543542 URGCP-MRPS24S4R325 110 aa4.36□□□□□ -1.71
LTBR-212ENST00000543542 TRAV9-2A0A087WT02 112 aa4.35□□□□□ -1.71
LTBR-212ENST00000543542 A0A087WWC5 75 aa4.35□□□□□ -1.71
LTBR-212ENST00000543542 SMKR1H3BMG3 65 aa4.35□□□□□ -1.71
LTBR-212ENST00000543542 NCR2O95944 276 aa4.35□□□□□ -1.71
LTBR-212ENST00000543542 RAB4AP20338 218 aa4.35□□□□□ -1.71
LTBR-212ENST00000543542 CKS2P33552 79 aa4.35□□□□□ -1.71
LTBR-212ENST00000543542 UBE2D3P61077 147 aa4.35□□□□□ -1.71
LTBR-212ENST00000543542 UBE2D2P62837 147 aa4.35□□□□□ -1.71
LTBR-212ENST00000543542 TMEM97Q5BJF2 176 aa4.35□□□□□ -1.71
LTBR-212ENST00000543542 LELP1Q5T871 98 aa4.35□□□□□ -1.71
LTBR-212ENST00000543542 DAZ4Q86SG3 579 aaKnown RBP4.35□□□□□ -1.71
LTBR-212ENST00000543542 FRZBQ92765 325 aa4.35□□□□□ -1.71
LTBR-212ENST00000543542 RPL39LQ96EH5 51 aaKnown RBP4.35□□□□□ -1.71
LTBR-212ENST00000543542 ST20Q9HBF5 79 aa4.35□□□□□ -1.71
LTBR-212ENST00000543542 DAZ3Q9NR90 486 aaKnown RBP4.35□□□□□ -1.71
LTBR-212ENST00000543542 TMEM242Q9NWH2 141 aa4.35□□□□□ -1.71
LTBR-212ENST00000543542 DNAH1Q9P2D7 4330 aa4.35□□□□□ -1.71
LTBR-212ENST00000543542 VPS13DQ5THJ4 4388 aa4.34□□□□□ -1.71
LTBR-212ENST00000543542 TRAV9-1A0A075B6T8 112 aa4.34□□□□□ -1.71
LTBR-212ENST00000543542 A0A1B0GXF2 115 aa4.34□□□□□ -1.71
LTBR-212ENST00000543542 TMEM262E9PQX1 116 aa4.34□□□□□ -1.71
LTBR-212ENST00000543542 PPP1R17O96001 155 aa4.34□□□□□ -1.71
LTBR-212ENST00000543542 IGHV3-30P01768 117 aa4.34□□□□□ -1.71
LTBR-212ENST00000543542 IGHV3-33P01772 117 aa4.34□□□□□ -1.71
LTBR-212ENST00000543542 IGHV3-30-3P0DP02 117 aa4.34□□□□□ -1.71
LTBR-212ENST00000543542 IGHV3-30-5P0DP03 117 aa4.34□□□□□ -1.71
LTBR-212ENST00000543542 PMCHP20382 165 aa4.34□□□□□ -1.71
LTBR-212ENST00000543542 TIRAPP58753 221 aa4.34□□□□□ -1.71
LTBR-212ENST00000543542 COTL1Q14019 142 aa4.34□□□□□ -1.71
LTBR-212ENST00000543542 MRPL51Q4U2R6 128 aaKnown RBP4.34□□□□□ -1.71
LTBR-212ENST00000543542 TTC32Q5I0X7 151 aa4.34□□□□□ -1.71
LTBR-212ENST00000543542 FAM104BQ5XKR9 115 aa4.34□□□□□ -1.71
LTBR-212ENST00000543542 WFDC10BQ8IUB3 73 aa4.34□□□□□ -1.71
LTBR-212ENST00000543542 DEFB104AQ8WTQ1 72 aa4.34□□□□□ -1.71
LTBR-212ENST00000543542 RNF185Q96GF1 192 aa4.34□□□□□ -1.71
LTBR-212ENST00000543542 CHCHD5Q9BSY4 110 aa4.34□□□□□ -1.71
LTBR-212ENST00000543542 UPK3BQ9BT76 320 aa4.34□□□□□ -1.71
LTBR-212ENST00000543542 SACSQ9NZJ4 4579 aa4.33□□□□□ -1.72
LTBR-212ENST00000543542 TRBV25-1A0A075B6N4 114 aa4.33□□□□□ -1.72
LTBR-212ENST00000543542 A0A087WX48 190 aa4.33□□□□□ -1.72
LTBR-212ENST00000543542 IGHV1-24A0A0C4DH33 117 aa4.33□□□□□ -1.72
LTBR-212ENST00000543542 NBDYA0A0U1RRE5 68 aa4.33□□□□□ -1.72
LTBR-212ENST00000543542 SDHAF1A6NFY7 115 aa4.33□□□□□ -1.72
LTBR-212ENST00000543542 D6R8Y8 96 aa4.33□□□□□ -1.72
LTBR-212ENST00000543542 UBE2L6O14933 153 aa4.33□□□□□ -1.72
LTBR-212ENST00000543542 LINC00694P0DN24 101 aa4.33□□□□□ -1.72
LTBR-212ENST00000543542 AMTP48728 403 aa4.33□□□□□ -1.72
LTBR-212ENST00000543542 COX19Q49B96 90 aa4.33□□□□□ -1.72
LTBR-212ENST00000543542 TMEM136Q6ZRR5 245 aa4.33□□□□□ -1.72
LTBR-212ENST00000543542 ORMDL3Q8N138 153 aa4.33□□□□□ -1.72
LTBR-212ENST00000543542 HYDINQ4G0P3 5121 aa4.33□□□□□ -1.72
LTBR-212ENST00000543542 TRBV6-8A0A0A6YYG3 113 aa4.32□□□□□ -1.72
LTBR-212ENST00000543542 I3L3M4 83 aa4.32□□□□□ -1.72
LTBR-212ENST00000543542 APCSP02743 223 aa4.32□□□□□ -1.72
LTBR-212ENST00000543542 PPBPP02775 128 aa4.32□□□□□ -1.72
LTBR-212ENST00000543542 FCER1GP30273 86 aa4.32□□□□□ -1.72
LTBR-212ENST00000543542 PKIAP61925 76 aa4.32□□□□□ -1.72
LTBR-212ENST00000543542 PRELID3AQ96N28 172 aa4.32□□□□□ -1.72
LTBR-212ENST00000543542 TMEM243Q9BU79 118 aa4.32□□□□□ -1.72
LTBR-212ENST00000543542 KMT2CQ8NEZ4 4911 aaKnown RBP4.32□□□□□ -1.72
LTBR-212ENST00000543542 TGIF2-C20orf24A0A0A6YYL0 155 aa4.31□□□□□ -1.72
LTBR-212ENST00000543542 TRBV6-5A0A0K0K1A5 114 aa4.31□□□□□ -1.72
LTBR-212ENST00000543542 LOC389332A0A1B0GUA5 103 aa4.31□□□□□ -1.72
LTBR-212ENST00000543542 VCYO14598 125 aa4.31□□□□□ -1.72
LTBR-212ENST00000543542 GAS8-AS1O95177 125 aa4.31□□□□□ -1.72
LTBR-212ENST00000543542 TNFRSF6BO95407 300 aa4.31□□□□□ -1.72
LTBR-212ENST00000543542 HLA-DQA1P01909 254 aa4.31□□□□□ -1.72
LTBR-212ENST00000543542 RPS10P46783 165 aaKnown RBP4.31□□□□□ -1.72
LTBR-212ENST00000543542 SUMO2P61956 95 aaKnown RBP4.31□□□□□ -1.72
LTBR-212ENST00000543542 FABP9Q0Z7S8 132 aa4.31□□□□□ -1.72
LTBR-212ENST00000543542 GAGE6Q13070 117 aa4.31□□□□□ -1.72
LTBR-212ENST00000543542 ELOBQ15370 118 aa4.31□□□□□ -1.72
LTBR-212ENST00000543542 KIAA1644Q3SXP7 199 aa4.31□□□□□ -1.72
LTBR-212ENST00000543542 C1orf134Q5TEV5 83 aa4.31□□□□□ -1.72
LTBR-212ENST00000543542 ATRAIDQ6UW56 229 aa4.31□□□□□ -1.72
LTBR-212ENST00000543542 C10orf126Q8N4M7 172 aa4.31□□□□□ -1.72
LTBR-212ENST00000543542 KIR2DL4Q99706 377 aa4.31□□□□□ -1.72
LTBR-212ENST00000543542 TMEM70Q9BUB7 260 aa4.31□□□□□ -1.72
LTBR-212ENST00000543542 MAP1LC3AQ9H492 121 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms