RNA–Protein interactions for RNA: ENST00000543264.6

SHD-201, Transcript of Src homology 2 domain containing transforming protein D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHD, Length 2,577 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHD-201ENST00000543264 EDN2P20800 178 aa17.63■□□□□ 0.41
SHD-201ENST00000543264 UBTD1Q9HAC8 227 aa17.63■□□□□ 0.41
SHD-201ENST00000543264 IGHV1-69P01742 117 aa17.63■□□□□ 0.41
SHD-201ENST00000543264 BPESC1Q9GZL8 116 aa17.63■□□□□ 0.41
SHD-201ENST00000543264 MDFICQ9P1T7 246 aa17.63■□□□□ 0.41
SHD-201ENST00000543264 TRAV16A0A0A6YYK6 109 aaPredicted RBP17.62■□□□□ 0.41
SHD-201ENST00000543264 M0QY20 66 aa17.62■□□□□ 0.41
SHD-201ENST00000543264 PF4V1P10720 104 aa17.62■□□□□ 0.41
SHD-201ENST00000543264 LMO4P61968 165 aa17.62■□□□□ 0.41
SHD-201ENST00000543264 IGKV3-20P01619 116 aa17.61■□□□□ 0.41
SHD-201ENST00000543264 BRD3OSQ6XYD6 125 aa17.61■□□□□ 0.41
SHD-201ENST00000543264 LY6EQ16553 131 aa17.61■□□□□ 0.41
SHD-201ENST00000543264 NDUFV3P56181 108 aaKnown RBP17.6■□□□□ 0.41
SHD-201ENST00000543264 NSUN5P1Q3KNT7 163 aa17.6■□□□□ 0.41
SHD-201ENST00000543264 SPXQ9BT56 116 aa17.6■□□□□ 0.41
SHD-201ENST00000543264 TRAV12-2A0A075B6T6 113 aa17.6■□□□□ 0.41
SHD-201ENST00000543264 A0A0J9YXY3 114 aa17.6■□□□□ 0.41
SHD-201ENST00000543264 M0R2P5 195 aa17.6■□□□□ 0.41
SHD-201ENST00000543264 PRSS2P07478 247 aa17.6■□□□□ 0.41
SHD-201ENST00000543264 RHOHQ15669 191 aa17.59■□□□□ 0.41
SHD-201ENST00000543264 TTC32Q5I0X7 151 aa17.59■□□□□ 0.41
SHD-201ENST00000543264 K7ENP7 123 aa17.59■□□□□ 0.41
SHD-201ENST00000543264 TRIAP1O43715 76 aa17.59■□□□□ 0.41
SHD-201ENST00000543264 C20orf203Q8NBC4 194 aa17.59■□□□□ 0.41
SHD-201ENST00000543264 TRAV8-4A0A0B4J246 113 aa17.58■□□□□ 0.41
SHD-201ENST00000543264 IGHV3-16A0A0C4DH30 117 aa17.58■□□□□ 0.41
SHD-201ENST00000543264 USMG5Q96IX5 58 aa17.58■□□□□ 0.41
SHD-201ENST00000543264 DAZ1Q9NQZ3 744 aaKnown RBP17.57■□□□□ 0.4
SHD-201ENST00000543264 IGLV4-3A0A075B6K6 122 aa17.57■□□□□ 0.4
SHD-201ENST00000543264 TRBV10-2A0A0K0K1G8 114 aa17.57■□□□□ 0.4
SHD-201ENST00000543264 ID1P41134 155 aa17.57■□□□□ 0.4
SHD-201ENST00000543264 PRRC2AP48634 2157 aaKnown RBP17.56■□□□□ 0.4
SHD-201ENST00000543264 C9orf85Q96MD7 179 aa17.56■□□□□ 0.4
SHD-201ENST00000543264 IGHV3-30-3P0DP02 117 aa17.56■□□□□ 0.4
SHD-201ENST00000543264 TRBV30A0A0K0K1B3 111 aa17.55■□□□□ 0.4
SHD-201ENST00000543264 ODF3Q96PU9 254 aa17.55■□□□□ 0.4
SHD-201ENST00000543264 ATRXP46100 2492 aa17.55■□□□□ 0.4
SHD-201ENST00000543264 IFITM1P13164 125 aa17.55■□□□□ 0.4
SHD-201ENST00000543264 C15orf53Q8NAA6 179 aa17.55■□□□□ 0.4
SHD-201ENST00000543264 I3L3M4 83 aa17.54■□□□□ 0.4
SHD-201ENST00000543264 H3BMM0 161 aa17.54■□□□□ 0.4
SHD-201ENST00000543264 UBE2WQ96B02 151 aa17.54■□□□□ 0.4
SHD-201ENST00000543264 TRAV8-3A0A0A6YYJ7 113 aa17.53■□□□□ 0.4
SHD-201ENST00000543264 A0A0J9YX75 114 aa17.53■□□□□ 0.4
SHD-201ENST00000543264 CCDC179H3BU77 68 aa17.53■□□□□ 0.4
SHD-201ENST00000543264 C2orf82Q6UX34 121 aa17.53■□□□□ 0.4
SHD-201ENST00000543264 DCANP1Q8TF63 244 aa17.53■□□□□ 0.4
SHD-201ENST00000543264 TIMM21Q9BVV7 248 aa17.53■□□□□ 0.4
SHD-201ENST00000543264 RPL13AP40429 203 aaKnown RBP17.53■□□□□ 0.4
SHD-201ENST00000543264 SORL1Q92673 2214 aa17.52■□□□□ 0.4
SHD-201ENST00000543264 GAGE12JA6NER3 117 aa17.52■□□□□ 0.4
SHD-201ENST00000543264 GAGE7O76087 117 aa17.52■□□□□ 0.4
SHD-201ENST00000543264 GAGE12FP0CL80 117 aa17.52■□□□□ 0.4
SHD-201ENST00000543264 GAGE12GP0CL81 117 aa17.52■□□□□ 0.4
SHD-201ENST00000543264 GAGE12IP0CL82 117 aa17.52■□□□□ 0.4
SHD-201ENST00000543264 NBL1P41271 181 aa17.52■□□□□ 0.4
SHD-201ENST00000543264 NPC2P61916 151 aa17.52■□□□□ 0.4
SHD-201ENST00000543264 FOXC1Q12948 553 aa17.52■□□□□ 0.4
SHD-201ENST00000543264 GAGE4Q13068 117 aa17.52■□□□□ 0.4
SHD-201ENST00000543264 BLCAPP62952 87 aa17.52■□□□□ 0.39
SHD-201ENST00000543264 ADAMTSL4-AS1Q5T5F5 129 aa17.51■□□□□ 0.39
SHD-201ENST00000543264 LITAFQ99732 161 aa17.51■□□□□ 0.39
SHD-201ENST00000543264 Q6ZSV7 163 aa17.51■□□□□ 0.39
SHD-201ENST00000543264 RNASE13Q5GAN3 156 aaKnown RBP17.5■□□□□ 0.39
SHD-201ENST00000543264 ICOSQ9Y6W8 199 aa17.5■□□□□ 0.39
SHD-201ENST00000543264 IGHG2P01859 326 aa17.5■□□□□ 0.39
SHD-201ENST00000543264 CEMP1Q6PRD7 247 aaPredicted RBP17.5■□□□□ 0.39
SHD-201ENST00000543264 H7C423 109 aa17.49■□□□□ 0.39
SHD-201ENST00000543264 CD28P10747 220 aa17.49■□□□□ 0.39
SHD-201ENST00000543264 COL12A1Q99715 3063 aa17.49■□□□□ 0.39
SHD-201ENST00000543264 SPINK13Q1W4C9 94 aa17.48■□□□□ 0.39
SHD-201ENST00000543264 IGHV1OR15-1A0A075B7D0 117 aa17.48■□□□□ 0.39
SHD-201ENST00000543264 H3BUA1 57 aa17.48■□□□□ 0.39
SHD-201ENST00000543264 CLEC2BQ92478 149 aa17.47■□□□□ 0.39
SHD-201ENST00000543264 LINC01600Q96MT4 127 aa17.47■□□□□ 0.39
SHD-201ENST00000543264 IGHV3-73A0A0B4J1V6 119 aa17.47■□□□□ 0.39
SHD-201ENST00000543264 A8MZ25 164 aa17.47■□□□□ 0.39
SHD-201ENST00000543264 H3BUX3 64 aa17.47■□□□□ 0.39
SHD-201ENST00000543264 Q6Q795 121 aa17.47■□□□□ 0.39
SHD-201ENST00000543264 NDUFA12Q9UI09 145 aa17.47■□□□□ 0.39
SHD-201ENST00000543264 COX6CP09669 75 aa17.46■□□□□ 0.39
SHD-201ENST00000543264 ABCA2Q9BZC7 2435 aa17.46■□□□□ 0.39
SHD-201ENST00000543264 VPS13CQ709C8 3753 aa17.45■□□□□ 0.38
SHD-201ENST00000543264 BRI3O95415 125 aa17.45■□□□□ 0.38
SHD-201ENST00000543264 FAM104AQ969W3 186 aa17.44■□□□□ 0.38
SHD-201ENST00000543264 DUX3Q96PT4 197 aa17.44■□□□□ 0.38
SHD-201ENST00000543264 IGHV4-38-2P0DP08 117 aa17.44■□□□□ 0.38
SHD-201ENST00000543264 IGHV1-58A0A0C4DH39 117 aa17.43■□□□□ 0.38
SHD-201ENST00000543264 MRPS36P82909 103 aaKnown RBP17.43■□□□□ 0.38
SHD-201ENST00000543264 K7EMT4 169 aa17.43■□□□□ 0.38
SHD-201ENST00000543264 HTN1P15515 57 aa17.43■□□□□ 0.38
SHD-201ENST00000543264 PROK1P58294 105 aa17.42■□□□□ 0.38
SHD-201ENST00000543264 IGLV1-40P01703 118 aa17.42■□□□□ 0.38
SHD-201ENST00000543264 MIAQ16674 131 aa17.41■□□□□ 0.38
SHD-201ENST00000543264 SPANXDQ9BXN6 97 aa17.41■□□□□ 0.38
SHD-201ENST00000543264 SPANXCQ9NY87 97 aa17.41■□□□□ 0.38
SHD-201ENST00000543264 SPTBN4Q9H254 2564 aa17.41■□□□□ 0.38
SHD-201ENST00000543264 MAP1AP78559 2803 aaPredicted RBP17.41■□□□□ 0.38
SHD-201ENST00000543264 DOPEY2Q9Y3R5 2298 aa17.4■□□□□ 0.38
SHD-201ENST00000543264 H3BT86 120 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms