RNA–Protein interactions for RNA: ENST00000543004.5

OTUB1-211, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 5 BASIC

Gene OTUB1, Length 1,647 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-211ENST00000543004 MRPL23Q16540 153 aaKnown RBP14.41□□□□□ -0.1
OTUB1-211ENST00000543004 MRPL51Q4U2R6 128 aaKnown RBP14.41□□□□□ -0.1
OTUB1-211ENST00000543004 RPL39LQ96EH5 51 aaKnown RBP14.41□□□□□ -0.1
OTUB1-211ENST00000543004 YPEL4Q96NS1 127 aa14.41□□□□□ -0.1
OTUB1-211ENST00000543004 LINC00694P0DN24 101 aa14.4□□□□□ -0.1
OTUB1-211ENST00000543004 SRIP30626 198 aa14.4□□□□□ -0.1
OTUB1-211ENST00000543004 RASL11AQ6T310 242 aa14.4□□□□□ -0.1
OTUB1-211ENST00000543004 TMEM136Q6ZRR5 245 aa14.4□□□□□ -0.1
OTUB1-211ENST00000543004 TRBV10-1A0A0K0K1A3 114 aa14.39□□□□□ -0.11
OTUB1-211ENST00000543004 RPS10P46783 165 aaKnown RBP14.39□□□□□ -0.11
OTUB1-211ENST00000543004 TCTAP57738 103 aa14.39□□□□□ -0.11
OTUB1-211ENST00000543004 ESRGQ1W209 222 aa14.38□□□□□ -0.11
OTUB1-211ENST00000543004 SMCO4Q9NRQ5 59 aa14.38□□□□□ -0.11
OTUB1-211ENST00000543004 TRBV7-3A0A075B6L6 115 aa14.37□□□□□ -0.11
OTUB1-211ENST00000543004 VPS13DQ5THJ4 4388 aa14.37□□□□□ -0.11
OTUB1-211ENST00000543004 DNAH1Q9P2D7 4330 aa14.37□□□□□ -0.11
OTUB1-211ENST00000543004 H7C1H1 209 aa14.37□□□□□ -0.11
OTUB1-211ENST00000543004 RPL36AP83881 106 aaKnown RBP14.37□□□□□ -0.11
OTUB1-211ENST00000543004 NEGR1Q7Z3B1 354 aa14.37□□□□□ -0.11
OTUB1-211ENST00000543004 RPL36ALQ969Q0 106 aaKnown RBP14.37□□□□□ -0.11
OTUB1-211ENST00000543004 NIT2Q9NQR4 276 aa14.37□□□□□ -0.11
OTUB1-211ENST00000543004 IGHV3-38A0A0C4DH36 116 aa14.36□□□□□ -0.11
OTUB1-211ENST00000543004 UBE2D3P61077 147 aa14.36□□□□□ -0.11
OTUB1-211ENST00000543004 UBE2D2P62837 147 aa14.36□□□□□ -0.11
OTUB1-211ENST00000543004 TRBV24-1A0A075B6N3 115 aa14.35□□□□□ -0.11
OTUB1-211ENST00000543004 LYPD5Q6UWN5 251 aa14.35□□□□□ -0.11
OTUB1-211ENST00000543004 ATP6V0E2Q8NHE4 81 aa14.35□□□□□ -0.11
OTUB1-211ENST00000543004 DEFB104AQ8WTQ1 72 aa14.35□□□□□ -0.11
OTUB1-211ENST00000543004 MRAP2Q96G30 205 aa14.35□□□□□ -0.11
OTUB1-211ENST00000543004 ALMS1Q8TCU4 4167 aa14.35□□□□□ -0.11
OTUB1-211ENST00000543004 D6R8Y8 96 aa14.34□□□□□ -0.11
OTUB1-211ENST00000543004 LINC00588Q9Y4M8 146 aa14.34□□□□□ -0.11
OTUB1-211ENST00000543004 TNFRSF18Q9Y5U5 241 aa14.34□□□□□ -0.11
OTUB1-211ENST00000543004 S100A1P23297 94 aa14.33□□□□□ -0.11
OTUB1-211ENST00000543004 CKS2P33552 79 aa14.33□□□□□ -0.11
OTUB1-211ENST00000543004 NRACQ8N912 160 aa14.33□□□□□ -0.11
OTUB1-211ENST00000543004 KIAA1644Q3SXP7 199 aa14.33□□□□□ -0.12
OTUB1-211ENST00000543004 OR10J3Q5JRS4 329 aa14.33□□□□□ -0.12
OTUB1-211ENST00000543004 DNAJC30Q96LL9 226 aa14.33□□□□□ -0.12
OTUB1-211ENST00000543004 GNB1LQ9BYB4 327 aa14.33□□□□□ -0.12
OTUB1-211ENST00000543004 KMT2CQ8NEZ4 4911 aaKnown RBP14.32□□□□□ -0.12
OTUB1-211ENST00000543004 FRZBQ92765 325 aa14.31□□□□□ -0.12
OTUB1-211ENST00000543004 HLA-DQA1P01909 254 aa14.3□□□□□ -0.12
OTUB1-211ENST00000543004 GTSF1LQ9H1H1 148 aa14.3□□□□□ -0.12
OTUB1-211ENST00000543004 SACSQ9NZJ4 4579 aa14.3□□□□□ -0.12
OTUB1-211ENST00000543004 LY6G6CO95867 125 aa14.3□□□□□ -0.12
OTUB1-211ENST00000543004 NPYP01303 97 aa14.3□□□□□ -0.12
OTUB1-211ENST00000543004 APCSP02743 223 aa14.3□□□□□ -0.12
OTUB1-211ENST00000543004 CCL18P55774 89 aa14.3□□□□□ -0.12
OTUB1-211ENST00000543004 SH2D6Q7Z4S9 175 aa14.3□□□□□ -0.12
OTUB1-211ENST00000543004 UBE2DNLQ8IWF7 75 aa14.3□□□□□ -0.12
OTUB1-211ENST00000543004 LINC00476Q8WZB0 136 aa14.3□□□□□ -0.12
OTUB1-211ENST00000543004 MRPL18Q9H0U6 180 aaKnown RBP14.3□□□□□ -0.12
OTUB1-211ENST00000543004 TRBV6-5A0A0K0K1A5 114 aa14.29□□□□□ -0.12
OTUB1-211ENST00000543004 SDHAF1A6NFY7 115 aa14.29□□□□□ -0.12
OTUB1-211ENST00000543004 ORMDL3Q8N138 153 aa14.29□□□□□ -0.12
OTUB1-211ENST00000543004 HYDINQ4G0P3 5121 aa14.29□□□□□ -0.12
OTUB1-211ENST00000543004 TNFRSF6BO95407 300 aa14.28□□□□□ -0.12
OTUB1-211ENST00000543004 LGALS9CQ6DKI2 356 aa14.28□□□□□ -0.12
OTUB1-211ENST00000543004 PRELID3AQ96N28 172 aa14.28□□□□□ -0.12
OTUB1-211ENST00000543004 KMT2AQ03164 3969 aa14.27□□□□□ -0.12
OTUB1-211ENST00000543004 COLCA2A8K830 154 aa14.27□□□□□ -0.12
OTUB1-211ENST00000543004 COX19Q49B96 90 aa14.27□□□□□ -0.12
OTUB1-211ENST00000543004 NTM-AS1Q6ZSK4 140 aa14.27□□□□□ -0.12
OTUB1-211ENST00000543004 TMEM70Q9BUB7 260 aa14.27□□□□□ -0.12
OTUB1-211ENST00000543004 ST20Q9HBF5 79 aa14.27□□□□□ -0.12
OTUB1-211ENST00000543004 PPBPP02775 128 aa14.26□□□□□ -0.13
OTUB1-211ENST00000543004 FABP9Q0Z7S8 132 aa14.26□□□□□ -0.13
OTUB1-211ENST00000543004 DAZ4Q86SG3 579 aaKnown RBP14.26□□□□□ -0.13
OTUB1-211ENST00000543004 DAZ3Q9NR90 486 aaKnown RBP14.26□□□□□ -0.13
OTUB1-211ENST00000543004 TRAPPC1Q9Y5R8 145 aa14.26□□□□□ -0.13
OTUB1-211ENST00000543004 MT-ND6P03923 174 aa14.26□□□□□ -0.13
OTUB1-211ENST00000543004 POLR2KP53803 58 aaKnown RBP14.26□□□□□ -0.13
OTUB1-211ENST00000543004 SUMO2P61956 95 aaKnown RBP14.26□□□□□ -0.13
OTUB1-211ENST00000543004 MRPS16Q9Y3D3 137 aaKnown RBP14.26□□□□□ -0.13
OTUB1-211ENST00000543004 WFDC10BQ8IUB3 73 aa14.25□□□□□ -0.13
OTUB1-211ENST00000543004 TIRAPP58753 221 aa14.24□□□□□ -0.13
OTUB1-211ENST00000543004 LELP1Q5T871 98 aa14.23□□□□□ -0.13
OTUB1-211ENST00000543004 TRBV6-8A0A0A6YYG3 113 aa14.23□□□□□ -0.13
OTUB1-211ENST00000543004 PPP1R17O96001 155 aa14.23□□□□□ -0.13
OTUB1-211ENST00000543004 LOC389332A0A1B0GUA5 103 aa14.22□□□□□ -0.13
OTUB1-211ENST00000543004 PMCHP20382 165 aa14.22□□□□□ -0.13
OTUB1-211ENST00000543004 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.22□□□□□ -0.13
OTUB1-211ENST00000543004 C20orf78Q9BR46 151 aa14.22□□□□□ -0.13
OTUB1-211ENST00000543004 ALKBH7Q9BT30 221 aaPredicted RBP14.22□□□□□ -0.13
OTUB1-211ENST00000543004 TRBV27A0A0K0K1C4 114 aa14.21□□□□□ -0.13
OTUB1-211ENST00000543004 LCE6AA0A183 80 aa14.21□□□□□ -0.13
OTUB1-211ENST00000543004 I3L3M4 83 aa14.21□□□□□ -0.13
OTUB1-211ENST00000543004 Q8N3U1 123 aa14.21□□□□□ -0.13
OTUB1-211ENST00000543004 UPK3BQ9BT76 320 aa14.21□□□□□ -0.13
OTUB1-211ENST00000543004 TSHBP01222 138 aa14.2□□□□□ -0.14
OTUB1-211ENST00000543004 COTL1Q14019 142 aa14.2□□□□□ -0.14
OTUB1-211ENST00000543004 IGLV2-18A0A075B6J9 118 aa14.19□□□□□ -0.14
OTUB1-211ENST00000543004 PHOX2AO14813 284 aa14.19□□□□□ -0.14
OTUB1-211ENST00000543004 RAB5AP20339 215 aa14.19□□□□□ -0.14
OTUB1-211ENST00000543004 SMIM2Q9BVW6 85 aa14.19□□□□□ -0.14
OTUB1-211ENST00000543004 Q9H8V8 135 aa14.19□□□□□ -0.14
OTUB1-211ENST00000543004 VCYO14598 125 aa14.19□□□□□ -0.14
OTUB1-211ENST00000543004 LAMTOR2Q9Y2Q5 125 aa14.19□□□□□ -0.14
OTUB1-211ENST00000543004 TRAV8-6A0A0B4J262 113 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 293.3 ms