RNA–Protein interactions for RNA: ENST00000542877.5

TNC-212, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 5,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-212ENST00000542877 IGHV3-30-5P0DP03 117 aa10□□□□□ -0.81
TNC-212ENST00000542877 OBSL1O75147 1896 aa10□□□□□ -0.81
TNC-212ENST00000542877 PROP1O75360 226 aa10□□□□□ -0.81
TNC-212ENST00000542877 ZNF80P51504 273 aaPredicted RBP10□□□□□ -0.81
TNC-212ENST00000542877 DEFB1P60022 68 aa10□□□□□ -0.81
TNC-212ENST00000542877 MIAQ16674 131 aa10□□□□□ -0.81
TNC-212ENST00000542877 UNQ9165/PRO28630Q6UXU0 137 aa10□□□□□ -0.81
TNC-212ENST00000542877 ZNF295-AS1Q8N0V1 137 aa10□□□□□ -0.81
TNC-212ENST00000542877 TMEM256-PLSCR3K7ERE1 68 aa9.99□□□□□ -0.81
TNC-212ENST00000542877 IGLC6P0CF74 106 aa9.99□□□□□ -0.81
TNC-212ENST00000542877 TIRAPP58753 221 aa9.99□□□□□ -0.81
TNC-212ENST00000542877 GDF5OSQ5U4N7 250 aa9.99□□□□□ -0.81
TNC-212ENST00000542877 PCNX2A6NKB5 2137 aa9.99□□□□□ -0.81
TNC-212ENST00000542877 NCR3O14931 201 aa9.99□□□□□ -0.81
TNC-212ENST00000542877 Q6ZPA2 131 aa9.99□□□□□ -0.81
TNC-212ENST00000542877 C4orf3Q8WVX3 66 aa9.99□□□□□ -0.81
TNC-212ENST00000542877 IGHV4-28A0A0C4DH34 117 aa9.99□□□□□ -0.81
TNC-212ENST00000542877 NDUFB1O75438 58 aa9.99□□□□□ -0.81
TNC-212ENST00000542877 FBXL19-AS1Q494R0 122 aa9.99□□□□□ -0.81
TNC-212ENST00000542877 CCL18P55774 89 aa9.98□□□□□ -0.81
TNC-212ENST00000542877 NFE4Q86UQ8 179 aa9.98□□□□□ -0.81
TNC-212ENST00000542877 PTH2Q96A98 100 aa9.98□□□□□ -0.81
TNC-212ENST00000542877 MBD6Q96DN6 1003 aa9.98□□□□□ -0.81
TNC-212ENST00000542877 TCL1BO95988 128 aa9.98□□□□□ -0.81
TNC-212ENST00000542877 PDE6GP18545 87 aa9.98□□□□□ -0.81
TNC-212ENST00000542877 LINC00643Q86TS7 51 aa9.98□□□□□ -0.81
TNC-212ENST00000542877 DIRC1Q969H9 104 aa9.98□□□□□ -0.81
TNC-212ENST00000542877 CRYGBP07316 175 aa9.98□□□□□ -0.81
TNC-212ENST00000542877 TMEM263Q8WUH6 116 aaKnown RBP9.98□□□□□ -0.81
TNC-212ENST00000542877 MYCNOSP40205 109 aa9.97□□□□□ -0.81
TNC-212ENST00000542877 SPAG11BQ08648 103 aa9.97□□□□□ -0.81
TNC-212ENST00000542877 A6NDX4 124 aa9.97□□□□□ -0.81
TNC-212ENST00000542877 NDUFC2O95298 119 aa9.97□□□□□ -0.81
TNC-212ENST00000542877 CCDC140Q96MF4 163 aa9.97□□□□□ -0.81
TNC-212ENST00000542877 ODF3Q96PU9 254 aa9.97□□□□□ -0.81
TNC-212ENST00000542877 A0A1W2PNU3 283 aaPredicted RBP9.96□□□□□ -0.81
TNC-212ENST00000542877 TRBV12-3P01733 135 aa9.96□□□□□ -0.81
TNC-212ENST00000542877 CRIP3Q6Q6R5 217 aa9.96□□□□□ -0.81
TNC-212ENST00000542877 A0A0J9YXY3 114 aa9.96□□□□□ -0.82
TNC-212ENST00000542877 ODF3BA8MYP8 253 aa9.96□□□□□ -0.82
TNC-212ENST00000542877 EIF4EBP1Q13541 118 aaPredicted RBP9.96□□□□□ -0.82
TNC-212ENST00000542877 C5orf47Q569G3 176 aa9.96□□□□□ -0.82
TNC-212ENST00000542877 TM2D2Q9BX73 214 aa9.96□□□□□ -0.82
TNC-212ENST00000542877 HIGD2BQ4VC39 106 aa9.95□□□□□ -0.82
TNC-212ENST00000542877 Q6ZUT4 128 aa9.95□□□□□ -0.82
TNC-212ENST00000542877 WFDC9Q8NEX5 89 aa9.95□□□□□ -0.82
TNC-212ENST00000542877 NEXN-AS1Q8NBZ9 246 aa9.95□□□□□ -0.82
TNC-212ENST00000542877 ESM1Q9NQ30 184 aa9.95□□□□□ -0.82
TNC-212ENST00000542877 DENND4AQ7Z401 1863 aa9.94□□□□□ -0.82
TNC-212ENST00000542877 PRB1P04280 392 aa9.94□□□□□ -0.82
TNC-212ENST00000542877 YPEL4Q96NS1 127 aa9.94□□□□□ -0.82
TNC-212ENST00000542877 HIST2H2BDQ6DRA6 164 aa9.94□□□□□ -0.82
TNC-212ENST00000542877 PRO0255Q9UI72 69 aa9.94□□□□□ -0.82
TNC-212ENST00000542877 TRAV26-1A0A087WT03 109 aa9.93□□□□□ -0.82
TNC-212ENST00000542877 CEMP1Q6PRD7 247 aaPredicted RBP9.93□□□□□ -0.82
TNC-212ENST00000542877 ARHGAP21Q5T5U3 1957 aa9.93□□□□□ -0.82
TNC-212ENST00000542877 KIF26AQ9ULI4 1882 aaPredicted RBP9.93□□□□□ -0.82
TNC-212ENST00000542877 MAP6D1Q9H9H5 199 aa9.93□□□□□ -0.82
TNC-212ENST00000542877 NCOA6Q14686 2063 aaPredicted RBP9.93□□□□□ -0.82
TNC-212ENST00000542877 PLA2G5P39877 138 aa9.93□□□□□ -0.82
TNC-212ENST00000542877 KLK12Q9UKR0 248 aa9.92□□□□□ -0.82
TNC-212ENST00000542877 C14orf132Q9NPU4 83 aa9.92□□□□□ -0.82
TNC-212ENST00000542877 TNFRSF13BO14836 293 aaPredicted RBP9.91□□□□□ -0.82
TNC-212ENST00000542877 SPANXB1Q9NS25 103 aaPredicted RBP9.91□□□□□ -0.82
TNC-212ENST00000542877 CHKB-CPT1BH3BT56 60 aa9.91□□□□□ -0.82
TNC-212ENST00000542877 WISP2O76076 250 aa9.91□□□□□ -0.82
TNC-212ENST00000542877 COX7BP24311 80 aa9.91□□□□□ -0.82
TNC-212ENST00000542877 C1orf229Q6ZS94 237 aaPredicted RBP9.91□□□□□ -0.82
TNC-212ENST00000542877 FSTL3O95633 263 aa9.91□□□□□ -0.82
TNC-212ENST00000542877 FREM1Q5H8C1 2179 aa9.91□□□□□ -0.82
TNC-212ENST00000542877 DEFB135Q30KP9 77 aa9.9□□□□□ -0.82
TNC-212ENST00000542877 IGF1P05019 195 aa9.9□□□□□ -0.82
TNC-212ENST00000542877 TP53TG3Q9ULZ0 132 aa9.9□□□□□ -0.82
TNC-212ENST00000542877 U3KQK5 164 aa9.9□□□□□ -0.82
TNC-212ENST00000542877 F8W735 103 aaPredicted RBP9.9□□□□□ -0.83
TNC-212ENST00000542877 PLCE1Q9P212 2302 aa9.9□□□□□ -0.83
TNC-212ENST00000542877 INSL3P51460 131 aa9.89□□□□□ -0.83
TNC-212ENST00000542877 ZFAND2AQ8N6M9 145 aa9.89□□□□□ -0.83
TNC-212ENST00000542877 TMEM223A0PJW6 202 aa9.89□□□□□ -0.83
TNC-212ENST00000542877 UBE2AP49459 152 aa9.89□□□□□ -0.83
TNC-212ENST00000542877 TNRC6BQ9UPQ9 1833 aaKnown RBP9.89□□□□□ -0.83
TNC-212ENST00000542877 NDUFV3P56181 108 aaKnown RBP9.89□□□□□ -0.83
TNC-212ENST00000542877 LMO4P61968 165 aa9.89□□□□□ -0.83
TNC-212ENST00000542877 NRGNQ92686 78 aa9.89□□□□□ -0.83
TNC-212ENST00000542877 P0DMU3 169 aa9.88□□□□□ -0.83
TNC-212ENST00000542877 FAM231AP0DMU4 169 aa9.88□□□□□ -0.83
TNC-212ENST00000542877 FAM231CP0DMU5 169 aa9.88□□□□□ -0.83
TNC-212ENST00000542877 ZNF22P17026 224 aaPredicted RBP9.88□□□□□ -0.83
TNC-212ENST00000542877 CLPSL1A2RUU4 121 aa9.88□□□□□ -0.83
TNC-212ENST00000542877 LINC01548A6NM66 108 aa9.88□□□□□ -0.83
TNC-212ENST00000542877 ZNF106Q9H2Y7 1883 aaKnown RBP9.88□□□□□ -0.83
TNC-212ENST00000542877 K7EQG2 157 aa9.88□□□□□ -0.83
TNC-212ENST00000542877 UFSP1Q6NVU6 142 aa9.88□□□□□ -0.83
TNC-212ENST00000542877 Q8NA96 180 aa9.88□□□□□ -0.83
TNC-212ENST00000542877 RNF183Q96D59 192 aa9.88□□□□□ -0.83
TNC-212ENST00000542877 H7C423 109 aa9.88□□□□□ -0.83
TNC-212ENST00000542877 IGKV2D-26A0A0A0MRZ7 120 aa9.87□□□□□ -0.83
TNC-212ENST00000542877 MT-ATP8P03928 68 aa9.87□□□□□ -0.83
TNC-212ENST00000542877 TEX49A0A1B0GTD5 131 aa9.87□□□□□ -0.83
TNC-212ENST00000542877 CRIP1P50238 77 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms