RNA–Protein interactions for RNA: ENST00000542685.5

XRCC4-206, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 1 (best)

Gene XRCC4, Length 1,243 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-206ENST00000542685 ASXL3Q9C0F0 2248 aa4.26□□□□□ -1.73
XRCC4-206ENST00000542685 ZNF407Q9C0G0 2248 aa4.26□□□□□ -1.73
XRCC4-206ENST00000542685 IGKV1D-37A0A075B6S9 117 aa4.26□□□□□ -1.73
XRCC4-206ENST00000542685 PINLYPA6NC86 204 aa4.26□□□□□ -1.73
XRCC4-206ENST00000542685 M0R3E3 92 aa4.26□□□□□ -1.73
XRCC4-206ENST00000542685 TIMM17BO60830 172 aa4.26□□□□□ -1.73
XRCC4-206ENST00000542685 SH2D1AO60880 128 aa4.26□□□□□ -1.73
XRCC4-206ENST00000542685 VPREB1P12018 145 aa4.26□□□□□ -1.73
XRCC4-206ENST00000542685 Q75L30 129 aa4.26□□□□□ -1.73
XRCC4-206ENST00000542685 MRPL55Q7Z7F7 128 aaKnown RBP4.26□□□□□ -1.73
XRCC4-206ENST00000542685 CD177Q8N6Q3 437 aa4.26□□□□□ -1.73
XRCC4-206ENST00000542685 TIMM17AQ99595 171 aa4.26□□□□□ -1.73
XRCC4-206ENST00000542685 TTTY12Q9BZ98 90 aa4.26□□□□□ -1.73
XRCC4-206ENST00000542685 NDUFA4L2Q9NRX3 87 aa4.26□□□□□ -1.73
XRCC4-206ENST00000542685 GNG12Q9UBI6 72 aa4.26□□□□□ -1.73
XRCC4-206ENST00000542685 SMAD5-AS1Q9Y6J3 95 aa4.26□□□□□ -1.73
XRCC4-206ENST00000542685 RTTNQ86VV8 2226 aa4.26□□□□□ -1.73
XRCC4-206ENST00000542685 LHBP01229 141 aa4.25□□□□□ -1.73
XRCC4-206ENST00000542685 IGHV3-9P01782 118 aa4.25□□□□□ -1.73
XRCC4-206ENST00000542685 SAA2P0DJI9 122 aaPredicted RBP4.25□□□□□ -1.73
XRCC4-206ENST00000542685 FXYD7P58549 80 aa4.25□□□□□ -1.73
XRCC4-206ENST00000542685 KRTAP10-3P60369 221 aa4.25□□□□□ -1.73
XRCC4-206ENST00000542685 DAZ2Q13117 558 aaKnown RBP4.25□□□□□ -1.73
XRCC4-206ENST00000542685 CACNA1EQ15878 2313 aa4.25□□□□□ -1.73
XRCC4-206ENST00000542685 ZNF833PQ6ZTB9 187 aa4.25□□□□□ -1.73
XRCC4-206ENST00000542685 STHQ8IWL8 128 aa4.25□□□□□ -1.73
XRCC4-206ENST00000542685 NUP37Q8NFH4 326 aa4.25□□□□□ -1.73
XRCC4-206ENST00000542685 TMEM167AQ8TBQ9 72 aa4.25□□□□□ -1.73
XRCC4-206ENST00000542685 MED12Q93074 2177 aa4.25□□□□□ -1.73
XRCC4-206ENST00000542685 AMELXQ99217 191 aa4.25□□□□□ -1.73
XRCC4-206ENST00000542685 CYSTM1Q9H1C7 97 aa4.25□□□□□ -1.73
XRCC4-206ENST00000542685 DAZ1Q9NQZ3 744 aaKnown RBP4.25□□□□□ -1.73
XRCC4-206ENST00000542685 FREM1Q5H8C1 2179 aa4.24□□□□□ -1.73
XRCC4-206ENST00000542685 A0A0C4DFX4 3053 aa4.24□□□□□ -1.73
XRCC4-206ENST00000542685 IGKV1D-17A0A075B6S4 117 aa4.24□□□□□ -1.73
XRCC4-206ENST00000542685 TRAV7A0A075B6U4 112 aa4.24□□□□□ -1.73
XRCC4-206ENST00000542685 LYRM9A8MSI8 78 aa4.24□□□□□ -1.73
XRCC4-206ENST00000542685 SMKR1H3BMG3 65 aa4.24□□□□□ -1.73
XRCC4-206ENST00000542685 H7BZZ5 65 aa4.24□□□□□ -1.73
XRCC4-206ENST00000542685 COX7A2LO14548 114 aa4.24□□□□□ -1.73
XRCC4-206ENST00000542685 DNAL4O96015 105 aa4.24□□□□□ -1.73
XRCC4-206ENST00000542685 CD59P13987 128 aa4.24□□□□□ -1.73
XRCC4-206ENST00000542685 CRIP1P50238 77 aa4.24□□□□□ -1.73
XRCC4-206ENST00000542685 RHOHQ15669 191 aa4.24□□□□□ -1.73
XRCC4-206ENST00000542685 LPAL2Q16609 132 aa4.24□□□□□ -1.73
XRCC4-206ENST00000542685 C17orf58Q2M2W7 97 aa4.24□□□□□ -1.73
XRCC4-206ENST00000542685 RPL39P5Q59GN2 51 aa4.24□□□□□ -1.73
XRCC4-206ENST00000542685 ZNF826PQ6ZT77 177 aa4.24□□□□□ -1.73
XRCC4-206ENST00000542685 FP248Q71RG6 208 aaPredicted RBP4.24□□□□□ -1.73
XRCC4-206ENST00000542685 VKORC1L1Q8N0U8 176 aa4.24□□□□□ -1.73
XRCC4-206ENST00000542685 DYNAPQ8N1N2 210 aa4.24□□□□□ -1.73
XRCC4-206ENST00000542685 DEFB119Q8N690 84 aa4.24□□□□□ -1.73
XRCC4-206ENST00000542685 ZNF491Q8N8L2 437 aa4.24□□□□□ -1.73
XRCC4-206ENST00000542685 UBE2D4Q9Y2X8 147 aa4.24□□□□□ -1.73
XRCC4-206ENST00000542685 DOCK10Q96BY6 2186 aa4.24□□□□□ -1.73
XRCC4-206ENST00000542685 IGLV4-69A0A075B6H9 119 aa4.23□□□□□ -1.73
XRCC4-206ENST00000542685 IGHV3-43A0A0B4J1X8 118 aa4.23□□□□□ -1.73
XRCC4-206ENST00000542685 IGHV1-58A0A0C4DH39 117 aa4.23□□□□□ -1.73
XRCC4-206ENST00000542685 IBA57-AS1B1ANH7 110 aa4.23□□□□□ -1.73
XRCC4-206ENST00000542685 NXPH4O95158 308 aa4.23□□□□□ -1.73
XRCC4-206ENST00000542685 IGHV1-69P01742 117 aa4.23□□□□□ -1.73
XRCC4-206ENST00000542685 SAA1P0DJI8 122 aaPredicted RBP4.23□□□□□ -1.73
XRCC4-206ENST00000542685 IGHV3-43DP0DP04 118 aa4.23□□□□□ -1.73
XRCC4-206ENST00000542685 IGHV1-2P23083 117 aa4.23□□□□□ -1.73
XRCC4-206ENST00000542685 MAGEA5P43359 124 aa4.23□□□□□ -1.73
XRCC4-206ENST00000542685 XCL1P47992 114 aa4.23□□□□□ -1.73
XRCC4-206ENST00000542685 CD164L2Q6UWJ8 174 aa4.23□□□□□ -1.73
XRCC4-206ENST00000542685 C2orf66Q6UXQ4 117 aa4.23□□□□□ -1.73
XRCC4-206ENST00000542685 MUSTN1Q8IVN3 82 aa4.23□□□□□ -1.73
XRCC4-206ENST00000542685 WFDC11Q8NEX6 87 aa4.23□□□□□ -1.73
XRCC4-206ENST00000542685 RETNQ9HD89 108 aa4.23□□□□□ -1.73
XRCC4-206ENST00000542685 CHD7Q9P2D1 2997 aa4.23□□□□□ -1.73
XRCC4-206ENST00000542685 XCL2Q9UBD3 114 aa4.23□□□□□ -1.73
XRCC4-206ENST00000542685 IGLV3-9A0A075B6K5 115 aa4.22□□□□□ -1.73
XRCC4-206ENST00000542685 A0A087X002 238 aa4.22□□□□□ -1.73
XRCC4-206ENST00000542685 TRAV13-2A0A0B4J235 113 aa4.22□□□□□ -1.73
XRCC4-206ENST00000542685 H3BRN7 92 aa4.22□□□□□ -1.73
XRCC4-206ENST00000542685 NDUFB3O43676 98 aa4.22□□□□□ -1.73
XRCC4-206ENST00000542685 CCKP06307 115 aa4.22□□□□□ -1.73
XRCC4-206ENST00000542685 IGHV4-38-2P0DP08 117 aa4.22□□□□□ -1.73
XRCC4-206ENST00000542685 CCL4P13236 92 aa4.22□□□□□ -1.73
XRCC4-206ENST00000542685 GATA1P15976 413 aaPredicted RBP4.22□□□□□ -1.73
XRCC4-206ENST00000542685 MIAQ16674 131 aa4.22□□□□□ -1.73
XRCC4-206ENST00000542685 TMEM61Q8N0U2 210 aa4.22□□□□□ -1.73
XRCC4-206ENST00000542685 PI4KAP42356 2102 aa4.22□□□□□ -1.73
XRCC4-206ENST00000542685 DIDO1Q9BTC0 2240 aaKnown RBP4.22□□□□□ -1.73
XRCC4-206ENST00000542685 TRANK1O15050 2925 aa4.22□□□□□ -1.73
XRCC4-206ENST00000542685 CACNA1GO43497 2377 aa4.21□□□□□ -1.73
XRCC4-206ENST00000542685 IGHV3OR16-10A0A075B7F0 116 aa4.21□□□□□ -1.74
XRCC4-206ENST00000542685 IGIPA6NJ69 53 aa4.21□□□□□ -1.74
XRCC4-206ENST00000542685 KRTAP16-1A8MUX0 517 aa4.21□□□□□ -1.74
XRCC4-206ENST00000542685 DEFB108AA8MXU0 73 aa4.21□□□□□ -1.74
XRCC4-206ENST00000542685 I3L3M4 83 aa4.21□□□□□ -1.74
XRCC4-206ENST00000542685 ERC2-IT1O76042 136 aa4.21□□□□□ -1.74
XRCC4-206ENST00000542685 ZNF80P51504 273 aaPredicted RBP4.21□□□□□ -1.74
XRCC4-206ENST00000542685 UBE2E1P51965 193 aa4.21□□□□□ -1.74
XRCC4-206ENST00000542685 SPINK14Q6IE38 97 aa4.21□□□□□ -1.74
XRCC4-206ENST00000542685 DAZ4Q86SG3 579 aaKnown RBP4.21□□□□□ -1.74
XRCC4-206ENST00000542685 OPRPNQ99935 248 aaPredicted RBP4.21□□□□□ -1.74
XRCC4-206ENST00000542685 DAZ3Q9NR90 486 aaKnown RBP4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms