RNA–Protein interactions for RNA: ENST00000542381.1

SRGAP1-204, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 360 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-204ENST00000542381 CCL3L1P16619 93 aa1.44□□□□□ -2.18
SRGAP1-204ENST00000542381 ELOF1P60002 83 aaKnown RBP1.44□□□□□ -2.18
SRGAP1-204ENST00000542381 INSL4Q14641 139 aa1.44□□□□□ -2.18
SRGAP1-204ENST00000542381 FAM74A4Q5TZK3 123 aa1.44□□□□□ -2.18
SRGAP1-204ENST00000542381 C4orf33Q8N1A6 199 aa1.44□□□□□ -2.18
SRGAP1-204ENST00000542381 FAM135AQ9P2D6 1515 aa1.44□□□□□ -2.18
SRGAP1-204ENST00000542381 DOCK11Q5JSL3 2073 aa1.44□□□□□ -2.18
SRGAP1-204ENST00000542381 A2ML1A8K2U0 1454 aa1.43□□□□□ -2.18
SRGAP1-204ENST00000542381 PI4KAP42356 2102 aa1.43□□□□□ -2.18
SRGAP1-204ENST00000542381 RBAKDNA6NC62 111 aa1.43□□□□□ -2.18
SRGAP1-204ENST00000542381 UBE2D1P51668 147 aa1.43□□□□□ -2.18
SRGAP1-204ENST00000542381 TPPP2P59282 170 aa1.43□□□□□ -2.18
SRGAP1-204ENST00000542381 WHAMMP3Q1A5X7 153 aa1.43□□□□□ -2.18
SRGAP1-204ENST00000542381 SPINK13Q1W4C9 94 aa1.43□□□□□ -2.18
SRGAP1-204ENST00000542381 MRPL54Q6P161 138 aaKnown RBP1.43□□□□□ -2.18
SRGAP1-204ENST00000542381 Q8N8P6 123 aa1.43□□□□□ -2.18
SRGAP1-204ENST00000542381 COX7B2Q8TF08 81 aa1.43□□□□□ -2.18
SRGAP1-204ENST00000542381 MYOM2P54296 1465 aa1.43□□□□□ -2.18
SRGAP1-204ENST00000542381 K7EIL1 84 aa1.42□□□□□ -2.18
SRGAP1-204ENST00000542381 APOC4-APOC2K7ER74 178 aa1.42□□□□□ -2.18
SRGAP1-204ENST00000542381 APOC2P02655 101 aa1.42□□□□□ -2.18
SRGAP1-204ENST00000542381 GNG4P50150 75 aa1.42□□□□□ -2.18
SRGAP1-204ENST00000542381 SSBP1Q04837 148 aaKnown RBP1.42□□□□□ -2.18
SRGAP1-204ENST00000542381 IFT140Q96RY7 1462 aa1.42□□□□□ -2.18
SRGAP1-204ENST00000542381 RIMS1Q86UR5 1692 aaKnown RBP1.42□□□□□ -2.18
SRGAP1-204ENST00000542381 ZNF462Q96JM2 2506 aa1.41□□□□□ -2.18
SRGAP1-204ENST00000542381 CASKIN1Q8WXD9 1431 aa1.41□□□□□ -2.18
SRGAP1-204ENST00000542381 CORTO00230 105 aa1.41□□□□□ -2.18
SRGAP1-204ENST00000542381 MRPS10P82664 201 aaKnown RBP1.41□□□□□ -2.18
SRGAP1-204ENST00000542381 C6orf52Q5T4I8 152 aa1.41□□□□□ -2.18
SRGAP1-204ENST00000542381 MYO7AQ13402 2215 aa1.41□□□□□ -2.18
SRGAP1-204ENST00000542381 NAV3Q8IVL0 2385 aa1.41□□□□□ -2.18
SRGAP1-204ENST00000542381 KDM6BO15054 1643 aa1.4□□□□□ -2.18
SRGAP1-204ENST00000542381 TRAV13-2A0A0B4J235 113 aa1.4□□□□□ -2.19
SRGAP1-204ENST00000542381 FXYD6P3P58550 94 aa1.4□□□□□ -2.19
SRGAP1-204ENST00000542381 C9orf153Q5TBE3 101 aa1.4□□□□□ -2.19
SRGAP1-204ENST00000542381 ZNF818PQ6ZRF7 136 aa1.4□□□□□ -2.19
SRGAP1-204ENST00000542381 TNS1Q9HBL0 1735 aaKnown RBP1.4□□□□□ -2.19
SRGAP1-204ENST00000542381 TANC1Q9C0D5 1861 aa1.39□□□□□ -2.19
SRGAP1-204ENST00000542381 ROBO1Q9Y6N7 1651 aa1.39□□□□□ -2.19
SRGAP1-204ENST00000542381 ERCC6L2Q5T890 1561 aa1.39□□□□□ -2.19
SRGAP1-204ENST00000542381 PPP3R1P63098 170 aa1.39□□□□□ -2.19
SRGAP1-204ENST00000542381 V9GYV3 84 aa1.39□□□□□ -2.19
SRGAP1-204ENST00000542381 A0A087WTM6 91 aa1.38□□□□□ -2.19
SRGAP1-204ENST00000542381 ZNF137PP52743 207 aa1.38□□□□□ -2.19
SRGAP1-204ENST00000542381 RPL37P61927 97 aaKnown RBP1.38□□□□□ -2.19
SRGAP1-204ENST00000542381 CCL8P80075 99 aa1.38□□□□□ -2.19
SRGAP1-204ENST00000542381 PPP3R2Q96LZ3 170 aa1.38□□□□□ -2.19
SRGAP1-204ENST00000542381 LINC00312Q9Y6C7 94 aa1.38□□□□□ -2.19
SRGAP1-204ENST00000542381 SIPA1L3O60292 1781 aaPredicted RBP1.38□□□□□ -2.19
SRGAP1-204ENST00000542381 TRBV7-1A0A0A6YYK4 115 aa1.37□□□□□ -2.19
SRGAP1-204ENST00000542381 HCG22E2RYF7 251 aa1.37□□□□□ -2.19
SRGAP1-204ENST00000542381 TNFP01375 233 aa1.37□□□□□ -2.19
SRGAP1-204ENST00000542381 EDDM3BP56851 147 aa1.37□□□□□ -2.19
SRGAP1-204ENST00000542381 SPINK9Q5DT21 86 aa1.37□□□□□ -2.19
SRGAP1-204ENST00000542381 AQP10Q96PS8 301 aa1.37□□□□□ -2.19
SRGAP1-204ENST00000542381 CGREF1Q99674 301 aa1.37□□□□□ -2.19
SRGAP1-204ENST00000542381 PRDM2Q13029 1718 aa1.37□□□□□ -2.19
SRGAP1-204ENST00000542381 OOSP1A8MZH6 123 aa1.36□□□□□ -2.19
SRGAP1-204ENST00000542381 F2Z2F3 143 aa1.36□□□□□ -2.19
SRGAP1-204ENST00000542381 S100PP25815 95 aa1.36□□□□□ -2.19
SRGAP1-204ENST00000542381 CPSF1Q10570 1443 aaKnown RBP1.36□□□□□ -2.19
SRGAP1-204ENST00000542381 NRKQ7Z2Y5 1582 aa1.36□□□□□ -2.19
SRGAP1-204ENST00000542381 LRRC37A3O60309 1634 aa1.36□□□□□ -2.19
SRGAP1-204ENST00000542381 CC2D2AQ9P2K1 1620 aa1.36□□□□□ -2.19
SRGAP1-204ENST00000542381 CLPSL1A2RUU4 121 aa1.35□□□□□ -2.19
SRGAP1-204ENST00000542381 C8orf59Q8N0T1 100 aaPredicted RBP1.35□□□□□ -2.19
SRGAP1-204ENST00000542381 ASH1LQ9NR48 2969 aaKnown RBP1.34□□□□□ -2.19
SRGAP1-204ENST00000542381 PSME4Q14997 1843 aa1.34□□□□□ -2.19
SRGAP1-204ENST00000542381 SIX6O95475 246 aa1.34□□□□□ -2.19
SRGAP1-204ENST00000542381 SVBPQ8N300 66 aa1.34□□□□□ -2.19
SRGAP1-204ENST00000542381 PZPP20742 1482 aa1.34□□□□□ -2.19
SRGAP1-204ENST00000542381 CADP27708 2225 aa1.34□□□□□ -2.2
SRGAP1-204ENST00000542381 C20orf202A1L168 122 aa1.33□□□□□ -2.2
SRGAP1-204ENST00000542381 ACYP2P14621 99 aa1.33□□□□□ -2.2
SRGAP1-204ENST00000542381 C10orf128Q5T292 105 aa1.33□□□□□ -2.2
SRGAP1-204ENST00000542381 GTF2H5Q6ZYL4 71 aa1.33□□□□□ -2.2
SRGAP1-204ENST00000542381 TTC9CQ8N5M4 171 aa1.33□□□□□ -2.2
SRGAP1-204ENST00000542381 JMJD1CQ15652 2540 aa1.33□□□□□ -2.2
SRGAP1-204ENST00000542381 SMARCA2P51531 1590 aa1.33□□□□□ -2.2
SRGAP1-204ENST00000542381 C5orf38Q86SI9 138 aa1.32□□□□□ -2.2
SRGAP1-204ENST00000542381 TCEAL7Q9BRU2 100 aa1.32□□□□□ -2.2
SRGAP1-204ENST00000542381 IER3IP1Q9Y5U9 82 aa1.32□□□□□ -2.2
SRGAP1-204ENST00000542381 SHROOM2Q13796 1616 aa1.31□□□□□ -2.2
SRGAP1-204ENST00000542381 A0A096LNT2 108 aa1.31□□□□□ -2.2
SRGAP1-204ENST00000542381 KRTAP5-10Q6L8G5 202 aa1.31□□□□□ -2.2
SRGAP1-204ENST00000542381 Q96NJ1 140 aa1.31□□□□□ -2.2
SRGAP1-204ENST00000542381 C12orf57Q99622 126 aa1.31□□□□□ -2.2
SRGAP1-204ENST00000542381 AKAP12Q02952 1782 aa1.31□□□□□ -2.2
SRGAP1-204ENST00000542381 PPIP5K1Q6PFW1 1433 aa1.31□□□□□ -2.2
SRGAP1-204ENST00000542381 SRCAPQ6ZRS2 3230 aa1.3□□□□□ -2.2
SRGAP1-204ENST00000542381 IFT172Q9UG01 1749 aa1.3□□□□□ -2.2
SRGAP1-204ENST00000542381 TRGV1A0A0A0MS02 117 aa1.3□□□□□ -2.2
SRGAP1-204ENST00000542381 FAM24AA6NFZ4 105 aa1.3□□□□□ -2.2
SRGAP1-204ENST00000542381 SMIM6P0DI80 62 aa1.3□□□□□ -2.2
SRGAP1-204ENST00000542381 PRB3Q04118 309 aaPredicted RBP1.3□□□□□ -2.2
SRGAP1-204ENST00000542381 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.3□□□□□ -2.2
SRGAP1-204ENST00000542381 ATP6V1G2-DDX39BF2Z307 99 aa1.29□□□□□ -2.2
SRGAP1-204ENST00000542381 PPP1R17O96001 155 aa1.29□□□□□ -2.2
SRGAP1-204ENST00000542381 COMMD6Q7Z4G1 85 aa1.29□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms