RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 CLUHP3Q96NS8 147 aa11.47□□□□□ -0.57
CNOT9-208ENST00000542068 MDFICQ9P1T7 246 aa11.47□□□□□ -0.57
CNOT9-208ENST00000542068 CHD6Q8TD26 2715 aa11.46□□□□□ -0.57
CNOT9-208ENST00000542068 A0A0J9YY99 117 aa11.46□□□□□ -0.57
CNOT9-208ENST00000542068 LGALS3P17931 250 aaKnown RBP11.46□□□□□ -0.57
CNOT9-208ENST00000542068 PMVKQ15126 192 aa11.46□□□□□ -0.57
CNOT9-208ENST00000542068 DEFB136Q30KP8 78 aa11.46□□□□□ -0.57
CNOT9-208ENST00000542068 RNASE13Q5GAN3 156 aaKnown RBP11.46□□□□□ -0.57
CNOT9-208ENST00000542068 C1QTNF4Q9BXJ3 329 aa11.46□□□□□ -0.57
CNOT9-208ENST00000542068 SPATA25Q9BR10 227 aa11.46□□□□□ -0.58
CNOT9-208ENST00000542068 ZNF580Q9UK33 172 aa11.46□□□□□ -0.58
CNOT9-208ENST00000542068 NDUFA11Q86Y39 141 aa11.45□□□□□ -0.58
CNOT9-208ENST00000542068 NPC2P61916 151 aa11.45□□□□□ -0.58
CNOT9-208ENST00000542068 FHL3Q13643 280 aa11.45□□□□□ -0.58
CNOT9-208ENST00000542068 IGHG2P01859 326 aa11.45□□□□□ -0.58
CNOT9-208ENST00000542068 CFC1BP0CG36 223 aa11.45□□□□□ -0.58
CNOT9-208ENST00000542068 CFC1P0CG37 223 aa11.45□□□□□ -0.58
CNOT9-208ENST00000542068 COX6B1P14854 86 aa11.45□□□□□ -0.58
CNOT9-208ENST00000542068 SPINK13Q1W4C9 94 aa11.45□□□□□ -0.58
CNOT9-208ENST00000542068 TRPT1Q86TN4 253 aaKnown RBP11.44□□□□□ -0.58
CNOT9-208ENST00000542068 SOCS3O14543 225 aa11.44□□□□□ -0.58
CNOT9-208ENST00000542068 USMG5Q96IX5 58 aa11.43□□□□□ -0.58
CNOT9-208ENST00000542068 J3QQQ9 107 aa11.43□□□□□ -0.58
CNOT9-208ENST00000542068 VCYO14598 125 aa11.43□□□□□ -0.58
CNOT9-208ENST00000542068 PRM2P04554 102 aa11.43□□□□□ -0.58
CNOT9-208ENST00000542068 PRSS2P07478 247 aa11.43□□□□□ -0.58
CNOT9-208ENST00000542068 UBE2D1P51668 147 aa11.43□□□□□ -0.58
CNOT9-208ENST00000542068 LENEPQ9Y5L5 61 aa11.43□□□□□ -0.58
CNOT9-208ENST00000542068 FLNAP21333 2647 aaKnown RBP11.43□□□□□ -0.58
CNOT9-208ENST00000542068 LINC00315P59091 139 aa11.43□□□□□ -0.58
CNOT9-208ENST00000542068 A6NDX4 124 aa11.42□□□□□ -0.58
CNOT9-208ENST00000542068 IGIPA6NJ69 53 aa11.42□□□□□ -0.58
CNOT9-208ENST00000542068 C9JAW5 83 aa11.42□□□□□ -0.58
CNOT9-208ENST00000542068 CRIP2P52943 208 aaPredicted RBP11.42□□□□□ -0.58
CNOT9-208ENST00000542068 XGP55808 180 aa11.42□□□□□ -0.58
CNOT9-208ENST00000542068 CARD19Q96LW7 228 aa11.42□□□□□ -0.58
CNOT9-208ENST00000542068 TRAV26-1A0A087WT03 109 aa11.42□□□□□ -0.58
CNOT9-208ENST00000542068 A4D1N5 150 aa11.42□□□□□ -0.58
CNOT9-208ENST00000542068 ID1P41134 155 aa11.42□□□□□ -0.58
CNOT9-208ENST00000542068 CDIP1Q9H305 208 aa11.42□□□□□ -0.58
CNOT9-208ENST00000542068 GEMIN7Q9H840 131 aaKnown RBP11.42□□□□□ -0.58
CNOT9-208ENST00000542068 A8MWV9 139 aa11.41□□□□□ -0.58
CNOT9-208ENST00000542068 CEMP1Q6PRD7 247 aaPredicted RBP11.41□□□□□ -0.58
CNOT9-208ENST00000542068 A0A0J9YXV3 536 aa11.41□□□□□ -0.58
CNOT9-208ENST00000542068 ANKRD29Q8N6D5 301 aa11.41□□□□□ -0.58
CNOT9-208ENST00000542068 SPXQ9BT56 116 aa11.41□□□□□ -0.58
CNOT9-208ENST00000542068 KNCNA6PVL3 124 aa11.4□□□□□ -0.58
CNOT9-208ENST00000542068 P0DMU3 169 aa11.4□□□□□ -0.58
CNOT9-208ENST00000542068 FAM231AP0DMU4 169 aa11.4□□□□□ -0.58
CNOT9-208ENST00000542068 FAM231CP0DMU5 169 aa11.4□□□□□ -0.58
CNOT9-208ENST00000542068 KIF25-AS1Q9Y6Z4 181 aa11.4□□□□□ -0.58
CNOT9-208ENST00000542068 IGHV3-30P01768 117 aa11.4□□□□□ -0.58
CNOT9-208ENST00000542068 IGHV3-30-5P0DP03 117 aa11.4□□□□□ -0.58
CNOT9-208ENST00000542068 POLR2KP53803 58 aaKnown RBP11.4□□□□□ -0.58
CNOT9-208ENST00000542068 PRO1854Q9UHT4 67 aa11.4□□□□□ -0.58
CNOT9-208ENST00000542068 PPP1R17O96001 155 aa11.4□□□□□ -0.59
CNOT9-208ENST00000542068 Q8N1Y9 231 aa11.39□□□□□ -0.59
CNOT9-208ENST00000542068 SCGB1A1P11684 91 aa11.38□□□□□ -0.59
CNOT9-208ENST00000542068 ZNF876PQ49A33 203 aa11.38□□□□□ -0.59
CNOT9-208ENST00000542068 MUSTN1Q8IVN3 82 aa11.38□□□□□ -0.59
CNOT9-208ENST00000542068 C10orf126Q8N4M7 172 aa11.38□□□□□ -0.59
CNOT9-208ENST00000542068 SNRPD3P62318 126 aaKnown RBP11.38□□□□□ -0.59
CNOT9-208ENST00000542068 IGHV3OR16-12A0A075B7B8 117 aa11.38□□□□□ -0.59
CNOT9-208ENST00000542068 A0A1W2PRX2 142 aa11.38□□□□□ -0.59
CNOT9-208ENST00000542068 PROK1P58294 105 aa11.38□□□□□ -0.59
CNOT9-208ENST00000542068 Q6ZUT4 128 aa11.38□□□□□ -0.59
CNOT9-208ENST00000542068 PPDPFLQ8WWR9 84 aa11.38□□□□□ -0.59
CNOT9-208ENST00000542068 A8MZ25 164 aa11.37□□□□□ -0.59
CNOT9-208ENST00000542068 UBE2D3P61077 147 aa11.37□□□□□ -0.59
CNOT9-208ENST00000542068 UBE2D2P62837 147 aa11.37□□□□□ -0.59
CNOT9-208ENST00000542068 SLC25A29Q8N8R3 303 aa11.37□□□□□ -0.59
CNOT9-208ENST00000542068 LINC01619G3V211 115 aa11.37□□□□□ -0.59
CNOT9-208ENST00000542068 TEN1Q86WV5 123 aa11.37□□□□□ -0.59
CNOT9-208ENST00000542068 ITPR3Q14573 2671 aa11.37□□□□□ -0.59
CNOT9-208ENST00000542068 LYRM7Q5U5X0 104 aa11.36□□□□□ -0.59
CNOT9-208ENST00000542068 VCX2Q9H322 139 aa11.36□□□□□ -0.59
CNOT9-208ENST00000542068 TRAV8-3A0A0A6YYJ7 113 aa11.36□□□□□ -0.59
CNOT9-208ENST00000542068 ELANEP08246 267 aa11.36□□□□□ -0.59
CNOT9-208ENST00000542068 KRTAP10-9P60411 292 aa11.36□□□□□ -0.59
CNOT9-208ENST00000542068 PAPPA-AS1Q5QFB9 102 aa11.36□□□□□ -0.59
CNOT9-208ENST00000542068 C18orf65Q6ZTR6 163 aa11.36□□□□□ -0.59
CNOT9-208ENST00000542068 ERG28Q9UKR5 140 aa11.36□□□□□ -0.59
CNOT9-208ENST00000542068 SLC25A20O43772 301 aa11.35□□□□□ -0.59
CNOT9-208ENST00000542068 TMEM141Q96I45 108 aa11.35□□□□□ -0.59
CNOT9-208ENST00000542068 IGHV4OR15-8A0A075B7B6 117 aa11.35□□□□□ -0.59
CNOT9-208ENST00000542068 A0A087WW49 117 aa11.35□□□□□ -0.59
CNOT9-208ENST00000542068 CRYBA4P53673 196 aa11.35□□□□□ -0.59
CNOT9-208ENST00000542068 Q6ZSV7 163 aa11.35□□□□□ -0.59
CNOT9-208ENST00000542068 LINC01356Q8N9X3 169 aa11.35□□□□□ -0.59
CNOT9-208ENST00000542068 FAM19A4Q96LR4 140 aa11.35□□□□□ -0.59
CNOT9-208ENST00000542068 KLLNB2CW77 178 aa11.34□□□□□ -0.59
CNOT9-208ENST00000542068 C19orf54Q5BKX5 351 aa11.34□□□□□ -0.59
CNOT9-208ENST00000542068 Q9UF83 564 aa11.34□□□□□ -0.59
CNOT9-208ENST00000542068 GATA3P23771 443 aa11.34□□□□□ -0.59
CNOT9-208ENST00000542068 SLURP1P55000 103 aa11.34□□□□□ -0.59
CNOT9-208ENST00000542068 A0A0U1RRA0 63 aa11.34□□□□□ -0.59
CNOT9-208ENST00000542068 EIF4EBP3O60516 100 aaPredicted RBP11.34□□□□□ -0.59
CNOT9-208ENST00000542068 NTN5Q8WTR8 489 aaPredicted RBP11.34□□□□□ -0.59
CNOT9-208ENST00000542068 FASNP49327 2511 aaKnown RBP11.34□□□□□ -0.59
CNOT9-208ENST00000542068 NIPBLQ6KC79 2804 aaeCLIP11.33□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 111.1 ms