RNA–Protein interactions for RNA: ENST00000541513.2

DDB1-219, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 958 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-219ENST00000541513 GFI1BQ5VTD9 330 aa3.8□□□□□ -1.8
DDB1-219ENST00000541513 FAM104BQ5XKR9 115 aa3.8□□□□□ -1.8
DDB1-219ENST00000541513 TMEM91Q6ZNR0 172 aa3.8□□□□□ -1.8
DDB1-219ENST00000541513 LCA10Q71F78 164 aa3.8□□□□□ -1.8
DDB1-219ENST00000541513 LINC00311Q8N616 119 aa3.8□□□□□ -1.8
DDB1-219ENST00000541513 AGPAT4-IT1Q9H0P7 198 aa3.8□□□□□ -1.8
DDB1-219ENST00000541513 RPS10P5Q9NQ39 176 aa3.8□□□□□ -1.8
DDB1-219ENST00000541513 CKLFQ9UBR5 152 aa3.8□□□□□ -1.8
DDB1-219ENST00000541513 CACFD1Q9UGQ2 172 aa3.8□□□□□ -1.8
DDB1-219ENST00000541513 MXRA5Q9NR99 2828 aa3.8□□□□□ -1.8
DDB1-219ENST00000541513 NIPBLQ6KC79 2804 aaeCLIP3.79□□□□□ -1.8
DDB1-219ENST00000541513 A0A087WWC5 75 aa3.79□□□□□ -1.8
DDB1-219ENST00000541513 A0A096LNT2 108 aa3.79□□□□□ -1.8
DDB1-219ENST00000541513 IGHV3-49A0A0A0MS15 119 aa3.79□□□□□ -1.8
DDB1-219ENST00000541513 TRAV41A0A0B4J266 112 aa3.79□□□□□ -1.8
DDB1-219ENST00000541513 C7orf77A4D0Y5 90 aa3.79□□□□□ -1.8
DDB1-219ENST00000541513 A6NIN4 97 aa3.79□□□□□ -1.8
DDB1-219ENST00000541513 PIN1P1O15428 100 aa3.79□□□□□ -1.8
DDB1-219ENST00000541513 YPEL1O60688 119 aa3.79□□□□□ -1.8
DDB1-219ENST00000541513 PITX3O75364 302 aa3.79□□□□□ -1.8
DDB1-219ENST00000541513 CST7O76096 145 aa3.79□□□□□ -1.8
DDB1-219ENST00000541513 LHBP01229 141 aa3.79□□□□□ -1.8
DDB1-219ENST00000541513 APCSP02743 223 aa3.79□□□□□ -1.8
DDB1-219ENST00000541513 ASIPP42127 132 aa3.79□□□□□ -1.8
DDB1-219ENST00000541513 HINT1P49773 126 aaPredicted RBP3.79□□□□□ -1.8
DDB1-219ENST00000541513 TMEM155Q4W5P6 130 aa3.79□□□□□ -1.8
DDB1-219ENST00000541513 LINC01545Q5VT33 79 aa3.79□□□□□ -1.8
DDB1-219ENST00000541513 GTSCR1Q86UQ5 136 aa3.79□□□□□ -1.8
DDB1-219ENST00000541513 Q8IYB0 196 aa3.79□□□□□ -1.8
DDB1-219ENST00000541513 RNF182Q8N6D2 247 aa3.79□□□□□ -1.8
DDB1-219ENST00000541513 WFDC11Q8NEX6 87 aa3.79□□□□□ -1.8
DDB1-219ENST00000541513 VSTM2AQ8TAG5 236 aa3.79□□□□□ -1.8
DDB1-219ENST00000541513 AQP3Q92482 292 aa3.79□□□□□ -1.8
DDB1-219ENST00000541513 H1FXQ92522 213 aaKnown RBP3.79□□□□□ -1.8
DDB1-219ENST00000541513 S100A16Q96FQ6 103 aaKnown RBP3.79□□□□□ -1.8
DDB1-219ENST00000541513 YPEL2Q96QA6 119 aa3.79□□□□□ -1.8
DDB1-219ENST00000541513 PYGO2Q9BRQ0 406 aa3.79□□□□□ -1.8
DDB1-219ENST00000541513 BPESC1Q9GZL8 116 aa3.79□□□□□ -1.8
DDB1-219ENST00000541513 ST20Q9HBF5 79 aa3.79□□□□□ -1.8
DDB1-219ENST00000541513 TAS2R4Q9NYW5 299 aa3.79□□□□□ -1.8
DDB1-219ENST00000541513 RABAC1Q9UI14 185 aa3.79□□□□□ -1.8
DDB1-219ENST00000541513 TRBV20-1A0A075B6N2 111 aa3.78□□□□□ -1.8
DDB1-219ENST00000541513 TRAV1-2A0A0B4J238 106 aa3.78□□□□□ -1.8
DDB1-219ENST00000541513 IGHV3-64DA0A0J9YX35 117 aa3.78□□□□□ -1.8
DDB1-219ENST00000541513 TMEM235A6NFC5 223 aa3.78□□□□□ -1.8
DDB1-219ENST00000541513 ZFP92A6NM28 416 aa3.78□□□□□ -1.8
DDB1-219ENST00000541513 H3BMG7 143 aa3.78□□□□□ -1.8
DDB1-219ENST00000541513 H3BRM9 83 aa3.78□□□□□ -1.8
DDB1-219ENST00000541513 TRACP01848 142 aa3.78□□□□□ -1.8
DDB1-219ENST00000541513 LINC00869P0C866 280 aa3.78□□□□□ -1.8
DDB1-219ENST00000541513 TRGC1P0CF51 173 aa3.78□□□□□ -1.8
DDB1-219ENST00000541513 FABP2P12104 132 aa3.78□□□□□ -1.8
DDB1-219ENST00000541513 NFYAP23511 347 aaPredicted RBP3.78□□□□□ -1.8
DDB1-219ENST00000541513 ZNF80P51504 273 aaPredicted RBP3.78□□□□□ -1.8
DDB1-219ENST00000541513 TAS2R45P59539 299 aa3.78□□□□□ -1.8
DDB1-219ENST00000541513 RPL36AP83881 106 aaKnown RBP3.78□□□□□ -1.8
DDB1-219ENST00000541513 KISS1Q15726 138 aa3.78□□□□□ -1.8
DDB1-219ENST00000541513 ZNF826PQ6ZT77 177 aa3.78□□□□□ -1.8
DDB1-219ENST00000541513 LYPD6Q86Y78 171 aa3.78□□□□□ -1.8
DDB1-219ENST00000541513 CEND1Q8N111 149 aa3.78□□□□□ -1.8
DDB1-219ENST00000541513 TMEM256Q8N2U0 113 aa3.78□□□□□ -1.8
DDB1-219ENST00000541513 RPP25LQ8N5L8 163 aaKnown RBP3.78□□□□□ -1.8
DDB1-219ENST00000541513 C16orf95Q9H693 158 aa3.78□□□□□ -1.8
DDB1-219ENST00000541513 ANK3Q12955 4377 aaKnown RBP3.77□□□□□ -1.81
DDB1-219ENST00000541513 MCRIP1C9JLW8 97 aa3.77□□□□□ -1.81
DDB1-219ENST00000541513 NDUFB3O43676 98 aa3.77□□□□□ -1.81
DDB1-219ENST00000541513 ZNF73O43830 326 aaPredicted RBP3.77□□□□□ -1.81
DDB1-219ENST00000541513 SNCGO76070 127 aa3.77□□□□□ -1.81
DDB1-219ENST00000541513 IGKV1-5P01602 117 aa3.77□□□□□ -1.81
DDB1-219ENST00000541513 SLC25A5P05141 298 aaKnown RBP3.77□□□□□ -1.81
DDB1-219ENST00000541513 INAFM2P0DMQ5 153 aa3.77□□□□□ -1.81
DDB1-219ENST00000541513 HLA-DRB4P13762 266 aa3.77□□□□□ -1.81
DDB1-219ENST00000541513 LGALS3P17931 250 aaKnown RBP3.77□□□□□ -1.81
DDB1-219ENST00000541513 CMC4P56277 68 aaPredicted RBP3.77□□□□□ -1.81
DDB1-219ENST00000541513 INSL4Q14641 139 aa3.77□□□□□ -1.81
DDB1-219ENST00000541513 LGALS9BQ3B8N2 356 aa3.77□□□□□ -1.81
DDB1-219ENST00000541513 LUZP6Q538Z0 58 aa3.77□□□□□ -1.81
DDB1-219ENST00000541513 ZNF660Q6AZW8 331 aaPredicted RBP3.77□□□□□ -1.81
DDB1-219ENST00000541513 LGALS9CQ6DKI2 356 aa3.77□□□□□ -1.81
DDB1-219ENST00000541513 NTM-AS1Q6ZSK4 140 aa3.77□□□□□ -1.81
DDB1-219ENST00000541513 OR10P1Q8NGE3 313 aa3.77□□□□□ -1.81
DDB1-219ENST00000541513 CLDND2Q8NHS1 167 aa3.77□□□□□ -1.81
DDB1-219ENST00000541513 TMEM158Q8WZ71 300 aa3.77□□□□□ -1.81
DDB1-219ENST00000541513 C16orf74Q96GX8 76 aa3.77□□□□□ -1.81
DDB1-219ENST00000541513 LINC00479Q96M42 142 aa3.77□□□□□ -1.81
DDB1-219ENST00000541513 SHANK2-AS3Q9BTD1 123 aa3.77□□□□□ -1.81
DDB1-219ENST00000541513 TXNL4BQ9NX01 149 aaKnown RBP3.77□□□□□ -1.81
DDB1-219ENST00000541513 KAAG1Q9UBP8 84 aa3.77□□□□□ -1.81
DDB1-219ENST00000541513 TP73-AS1Q9UF72 201 aa3.77□□□□□ -1.81
DDB1-219ENST00000541513 ZNF222Q9UK12 451 aa3.77□□□□□ -1.81
DDB1-219ENST00000541513 ZNF580Q9UK33 172 aa3.77□□□□□ -1.81
DDB1-219ENST00000541513 SERP1Q9Y6X1 66 aa3.77□□□□□ -1.81
DDB1-219ENST00000541513 HLA-DRB4X5D2U9 266 aa3.77□□□□□ -1.81
DDB1-219ENST00000541513 FN1P02751 2386 aaKnown RBP3.77□□□□□ -1.81
DDB1-219ENST00000541513 SETD2Q9BYW2 2564 aaPredicted RBP3.77□□□□□ -1.81
DDB1-219ENST00000541513 IGKV1D-17A0A075B6S4 117 aa3.76□□□□□ -1.81
DDB1-219ENST00000541513 MUC21A0A0G2JKD1 596 aa3.76□□□□□ -1.81
DDB1-219ENST00000541513 OOSP1A8MZH6 123 aa3.76□□□□□ -1.81
DDB1-219ENST00000541513 RBP4P02753 201 aa3.76□□□□□ -1.81
DDB1-219ENST00000541513 TCRAP04437 139 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 202.3 ms