RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 ADCYAP1P18509 176 aa12.91□□□□□ -0.34
VPS33A-205ENST00000541169 UBE2D3P61077 147 aa12.91□□□□□ -0.34
VPS33A-205ENST00000541169 UBE2D2P62837 147 aa12.91□□□□□ -0.34
VPS33A-205ENST00000541169 ATP5L2Q7Z4Y8 100 aa12.91□□□□□ -0.34
VPS33A-205ENST00000541169 CARHSP1Q9Y2V2 147 aaKnown RBP12.91□□□□□ -0.34
VPS33A-205ENST00000541169 NDUFA5Q16718 116 aa12.9□□□□□ -0.34
VPS33A-205ENST00000541169 SUMO4Q6EEV6 95 aa12.9□□□□□ -0.34
VPS33A-205ENST00000541169 NEXN-AS1Q8NBZ9 246 aa12.9□□□□□ -0.34
VPS33A-205ENST00000541169 NIT2Q9NQR4 276 aa12.9□□□□□ -0.34
VPS33A-205ENST00000541169 TMEM242Q9NWH2 141 aa12.9□□□□□ -0.34
VPS33A-205ENST00000541169 PPP1R17O96001 155 aa12.89□□□□□ -0.35
VPS33A-205ENST00000541169 NBDYA0A0U1RRE5 68 aa12.88□□□□□ -0.35
VPS33A-205ENST00000541169 HBBP68871 147 aa12.88□□□□□ -0.35
VPS33A-205ENST00000541169 MRAP2Q96G30 205 aa12.88□□□□□ -0.35
VPS33A-205ENST00000541169 RHEBQ15382 184 aa12.87□□□□□ -0.35
VPS33A-205ENST00000541169 OR10J3Q5JRS4 329 aa12.87□□□□□ -0.35
VPS33A-205ENST00000541169 KCNIP4Q6PIL6 250 aa12.87□□□□□ -0.35
VPS33A-205ENST00000541169 Q6ZR54 194 aa12.87□□□□□ -0.35
VPS33A-205ENST00000541169 KMT2CQ8NEZ4 4911 aaKnown RBP12.87□□□□□ -0.35
VPS33A-205ENST00000541169 TRAV9-1A0A075B6T8 112 aa12.86□□□□□ -0.35
VPS33A-205ENST00000541169 IGHV3-38A0A0C4DH36 116 aa12.86□□□□□ -0.35
VPS33A-205ENST00000541169 DNAH10OSP0CZ25 163 aa12.86□□□□□ -0.35
VPS33A-205ENST00000541169 PKIAP61925 76 aa12.86□□□□□ -0.35
VPS33A-205ENST00000541169 C10orf126Q8N4M7 172 aa12.86□□□□□ -0.35
VPS33A-205ENST00000541169 BTF3L4Q96K17 158 aa12.86□□□□□ -0.35
VPS33A-205ENST00000541169 Q9UF83 564 aa12.86□□□□□ -0.35
VPS33A-205ENST00000541169 PLECQ15149 4684 aaKnown RBP12.85□□□□□ -0.35
VPS33A-205ENST00000541169 IGLV2-18A0A075B6J9 118 aa12.85□□□□□ -0.35
VPS33A-205ENST00000541169 GATD1Q8NB37 220 aa12.85□□□□□ -0.35
VPS33A-205ENST00000541169 LYSTQ99698 3801 aa12.85□□□□□ -0.35
VPS33A-205ENST00000541169 RAB4AP20338 218 aa12.84□□□□□ -0.35
VPS33A-205ENST00000541169 S100PP25815 95 aa12.84□□□□□ -0.35
VPS33A-205ENST00000541169 LINC01556Q5JQF7 62 aa12.84□□□□□ -0.35
VPS33A-205ENST00000541169 SVBPQ8N300 66 aa12.84□□□□□ -0.35
VPS33A-205ENST00000541169 A0A1B0GXF2 115 aa12.83□□□□□ -0.36
VPS33A-205ENST00000541169 CAMPP49913 170 aa12.83□□□□□ -0.36
VPS33A-205ENST00000541169 CLRN3Q8NCR9 226 aa12.83□□□□□ -0.36
VPS33A-205ENST00000541169 CHCHD7Q9BUK0 85 aa12.83□□□□□ -0.36
VPS33A-205ENST00000541169 TRBV6-8A0A0A6YYG3 113 aa12.82□□□□□ -0.36
VPS33A-205ENST00000541169 TRBV6-5A0A0K0K1A5 114 aa12.82□□□□□ -0.36
VPS33A-205ENST00000541169 SNAPINO95295 136 aa12.82□□□□□ -0.36
VPS33A-205ENST00000541169 FAM104BQ5XKR9 115 aa12.82□□□□□ -0.36
VPS33A-205ENST00000541169 URGCP-MRPS24S4R325 110 aa12.82□□□□□ -0.36
VPS33A-205ENST00000541169 ALMS1Q8TCU4 4167 aa12.82□□□□□ -0.36
VPS33A-205ENST00000541169 C7orf77A4D0Y5 90 aa12.81□□□□□ -0.36
VPS33A-205ENST00000541169 PPBPP02775 128 aa12.81□□□□□ -0.36
VPS33A-205ENST00000541169 C1orf134Q5TEV5 83 aa12.81□□□□□ -0.36
VPS33A-205ENST00000541169 MRPL54Q6P161 138 aaKnown RBP12.81□□□□□ -0.36
VPS33A-205ENST00000541169 WFDC10BQ8IUB3 73 aa12.81□□□□□ -0.36
VPS33A-205ENST00000541169 AMN1Q8IY45 258 aa12.81□□□□□ -0.36
VPS33A-205ENST00000541169 RNF185Q96GF1 192 aa12.81□□□□□ -0.36
VPS33A-205ENST00000541169 TRAV26-2A0A0B4J265 109 aa12.8□□□□□ -0.36
VPS33A-205ENST00000541169 M0R2N4 97 aa12.8□□□□□ -0.36
VPS33A-205ENST00000541169 NCR2O95944 276 aa12.8□□□□□ -0.36
VPS33A-205ENST00000541169 LINC00336Q6ZUF6 198 aa12.8□□□□□ -0.36
VPS33A-205ENST00000541169 TRBV25-1A0A075B6N4 114 aa12.79□□□□□ -0.36
VPS33A-205ENST00000541169 APOC3P02656 99 aa12.79□□□□□ -0.36
VPS33A-205ENST00000541169 NFE4Q86UQ8 179 aa12.79□□□□□ -0.36
VPS33A-205ENST00000541169 ST20Q9HBF5 79 aa12.79□□□□□ -0.36
VPS33A-205ENST00000541169 IGHV1-24A0A0C4DH33 117 aa12.78□□□□□ -0.36
VPS33A-205ENST00000541169 COTL1Q14019 142 aa12.78□□□□□ -0.36
VPS33A-205ENST00000541169 ELOBQ15370 118 aa12.78□□□□□ -0.36
VPS33A-205ENST00000541169 IQCJQ1A5X6 159 aa12.78□□□□□ -0.36
VPS33A-205ENST00000541169 COX19Q49B96 90 aa12.78□□□□□ -0.36
VPS33A-205ENST00000541169 C6orf223Q8N319 242 aa12.78□□□□□ -0.36
VPS33A-205ENST00000541169 RPS10P5Q9NQ39 176 aa12.78□□□□□ -0.36
VPS33A-205ENST00000541169 CKS2P33552 79 aa12.77□□□□□ -0.37
VPS33A-205ENST00000541169 A0A087WX48 190 aa12.76□□□□□ -0.37
VPS33A-205ENST00000541169 SDHAF1A6NFY7 115 aa12.76□□□□□ -0.37
VPS33A-205ENST00000541169 I3L3M4 83 aa12.76□□□□□ -0.37
VPS33A-205ENST00000541169 PHOX2AO14813 284 aa12.76□□□□□ -0.37
VPS33A-205ENST00000541169 LAGE3Q14657 143 aa12.76□□□□□ -0.37
VPS33A-205ENST00000541169 MRPL51Q4U2R6 128 aaKnown RBP12.76□□□□□ -0.37
VPS33A-205ENST00000541169 NIT1Q86X76 327 aa12.76□□□□□ -0.37
VPS33A-205ENST00000541169 TRBV24-1A0A075B6N3 115 aa12.75□□□□□ -0.37
VPS33A-205ENST00000541169 TCAPO15273 167 aa12.75□□□□□ -0.37
VPS33A-205ENST00000541169 RPL39LQ96EH5 51 aaKnown RBP12.75□□□□□ -0.37
VPS33A-205ENST00000541169 C20orf78Q9BR46 151 aa12.75□□□□□ -0.37
VPS33A-205ENST00000541169 CHCHD5Q9BSY4 110 aa12.75□□□□□ -0.37
VPS33A-205ENST00000541169 LAMTOR2Q9Y2Q5 125 aa12.75□□□□□ -0.37
VPS33A-205ENST00000541169 TRBV27A0A0K0K1C4 114 aa12.74□□□□□ -0.37
VPS33A-205ENST00000541169 VCYO14598 125 aa12.74□□□□□ -0.37
VPS33A-205ENST00000541169 ORMDL3Q8N138 153 aa12.74□□□□□ -0.37
VPS33A-205ENST00000541169 IBA57-AS1B1ANH7 110 aa12.73□□□□□ -0.37
VPS33A-205ENST00000541169 H7C423 109 aa12.73□□□□□ -0.37
VPS33A-205ENST00000541169 PMCHP20382 165 aa12.73□□□□□ -0.37
VPS33A-205ENST00000541169 SUMO2P61956 95 aaKnown RBP12.73□□□□□ -0.37
VPS33A-205ENST00000541169 RPL32P62910 135 aaKnown RBP12.73□□□□□ -0.37
VPS33A-205ENST00000541169 NTM-AS1Q6ZSK4 140 aa12.73□□□□□ -0.37
VPS33A-205ENST00000541169 TMEM243Q9BU79 118 aa12.73□□□□□ -0.37
VPS33A-205ENST00000541169 TMEM70Q9BUB7 260 aa12.73□□□□□ -0.37
VPS33A-205ENST00000541169 TMEM262E9PQX1 116 aa12.72□□□□□ -0.37
VPS33A-205ENST00000541169 AMTP48728 403 aa12.72□□□□□ -0.37
VPS33A-205ENST00000541169 POLR2KP53803 58 aaKnown RBP12.72□□□□□ -0.37
VPS33A-205ENST00000541169 NRACQ8N912 160 aa12.72□□□□□ -0.37
VPS33A-205ENST00000541169 KIR2DL4Q99706 377 aa12.72□□□□□ -0.37
VPS33A-205ENST00000541169 KRTAP1-5Q9BYS1 174 aa12.72□□□□□ -0.37
VPS33A-205ENST00000541169 DNAH1Q9P2D7 4330 aa12.71□□□□□ -0.37
VPS33A-205ENST00000541169 TRAV8-3A0A0A6YYJ7 113 aa12.71□□□□□ -0.37
VPS33A-205ENST00000541169 IGHV3-30P01768 117 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms