RNA–Protein interactions for RNA: ENST00000540846.6

SMAD3-204, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-204ENST00000540846 PAM16Q9Y3D7 125 aa9□□□□□ -0.97
SMAD3-204ENST00000540846 A8MWV9 139 aa8.99□□□□□ -0.97
SMAD3-204ENST00000540846 F5H697 171 aa8.99□□□□□ -0.97
SMAD3-204ENST00000540846 M0QY20 66 aa8.99□□□□□ -0.97
SMAD3-204ENST00000540846 IFI27L1Q96BM0 104 aa8.99□□□□□ -0.97
SMAD3-204ENST00000540846 ST20Q9HBF5 79 aa8.99□□□□□ -0.97
SMAD3-204ENST00000540846 TCAPO15273 167 aa8.99□□□□□ -0.97
SMAD3-204ENST00000540846 ORMDL2Q53FV1 153 aa8.99□□□□□ -0.97
SMAD3-204ENST00000540846 UFSP1Q6NVU6 142 aa8.99□□□□□ -0.97
SMAD3-204ENST00000540846 ATOH7Q8N100 152 aa8.99□□□□□ -0.97
SMAD3-204ENST00000540846 KIR2DL5BQ8NHK3 375 aa8.99□□□□□ -0.97
SMAD3-204ENST00000540846 RNASE8Q8TDE3 154 aaKnown RBP8.99□□□□□ -0.97
SMAD3-204ENST00000540846 CSTL1Q9H114 145 aa8.99□□□□□ -0.97
SMAD3-204ENST00000540846 GOLT1BQ9Y3E0 138 aa8.99□□□□□ -0.97
SMAD3-204ENST00000540846 TRAV9-2A0A087WT02 112 aa8.98□□□□□ -0.97
SMAD3-204ENST00000540846 POLR2KP53803 58 aaKnown RBP8.98□□□□□ -0.97
SMAD3-204ENST00000540846 TMEM263Q8WUH6 116 aaKnown RBP8.98□□□□□ -0.97
SMAD3-204ENST00000540846 TENM3Q9P273 2699 aa8.97□□□□□ -0.97
SMAD3-204ENST00000540846 IGHV3OR16-12A0A075B7B8 117 aa8.97□□□□□ -0.97
SMAD3-204ENST00000540846 RHODO00212 210 aa8.97□□□□□ -0.97
SMAD3-204ENST00000540846 AZU1P20160 251 aa8.97□□□□□ -0.97
SMAD3-204ENST00000540846 LGALS9BQ3B8N2 356 aa8.97□□□□□ -0.97
SMAD3-204ENST00000540846 SPATA45Q537H7 98 aa8.97□□□□□ -0.97
SMAD3-204ENST00000540846 LGALS9CQ6DKI2 356 aa8.97□□□□□ -0.97
SMAD3-204ENST00000540846 TRBV27A0A0K0K1C4 114 aa8.96□□□□□ -0.97
SMAD3-204ENST00000540846 H0Y8G0 127 aa8.96□□□□□ -0.97
SMAD3-204ENST00000540846 H7C1H1 209 aa8.96□□□□□ -0.97
SMAD3-204ENST00000540846 ATP5LO75964 103 aa8.96□□□□□ -0.97
SMAD3-204ENST00000540846 NUDT3O95989 172 aa8.96□□□□□ -0.97
SMAD3-204ENST00000540846 CFAP126Q5VTH2 177 aa8.96□□□□□ -0.97
SMAD3-204ENST00000540846 ZNF705AQ6ZN79 300 aaPredicted RBP8.96□□□□□ -0.97
SMAD3-204ENST00000540846 MRPL16Q9NX20 251 aaKnown RBP8.96□□□□□ -0.97
SMAD3-204ENST00000540846 SDHAF1A6NFY7 115 aa8.95□□□□□ -0.98
SMAD3-204ENST00000540846 VCYO14598 125 aa8.95□□□□□ -0.98
SMAD3-204ENST00000540846 RS1O15537 224 aa8.95□□□□□ -0.98
SMAD3-204ENST00000540846 APOC4P55056 127 aa8.95□□□□□ -0.98
SMAD3-204ENST00000540846 MAJINQ3KP22 176 aa8.95□□□□□ -0.98
SMAD3-204ENST00000540846 C18orf15Q96N68 181 aa8.95□□□□□ -0.98
SMAD3-204ENST00000540846 TOMM6Q96B49 74 aa8.95□□□□□ -0.98
SMAD3-204ENST00000540846 C16orf74Q96GX8 76 aa8.95□□□□□ -0.98
SMAD3-204ENST00000540846 DAZ2Q13117 558 aaKnown RBP8.94□□□□□ -0.98
SMAD3-204ENST00000540846 ZFP2Q6ZN57 461 aa8.94□□□□□ -0.98
SMAD3-204ENST00000540846 NEGR1Q7Z3B1 354 aa8.94□□□□□ -0.98
SMAD3-204ENST00000540846 KIR2DL4Q99706 377 aa8.94□□□□□ -0.98
SMAD3-204ENST00000540846 PMCHL2Q9BQD1 86 aa8.94□□□□□ -0.98
SMAD3-204ENST00000540846 MIEN1Q9BRT3 115 aa8.94□□□□□ -0.98
SMAD3-204ENST00000540846 COL7A1Q02388 2944 aa8.93□□□□□ -0.98
SMAD3-204ENST00000540846 PLAC8L1A1L4L8 177 aa8.93□□□□□ -0.98
SMAD3-204ENST00000540846 IGLC3P0DOY3 106 aa8.93□□□□□ -0.98
SMAD3-204ENST00000540846 DEFA6Q01524 100 aa8.93□□□□□ -0.98
SMAD3-204ENST00000540846 DEFB135Q30KP9 77 aa8.93□□□□□ -0.98
SMAD3-204ENST00000540846 IGHV3-73A0A0B4J1V6 119 aa8.92□□□□□ -0.98
SMAD3-204ENST00000540846 LINC01549A6NIU2 74 aa8.92□□□□□ -0.98
SMAD3-204ENST00000540846 IGHV3-53P01767 116 aa8.92□□□□□ -0.98
SMAD3-204ENST00000540846 G0S2P27469 103 aa8.92□□□□□ -0.98
SMAD3-204ENST00000540846 ODF1Q14990 250 aa8.92□□□□□ -0.98
SMAD3-204ENST00000540846 C2orf66Q6UXQ4 117 aa8.92□□□□□ -0.98
SMAD3-204ENST00000540846 X6R8D5 127 aa8.92□□□□□ -0.98
SMAD3-204ENST00000540846 TRGV1A0A0A0MS02 117 aa8.91□□□□□ -0.98
SMAD3-204ENST00000540846 hDV102S1A0JD36 115 aa8.91□□□□□ -0.98
SMAD3-204ENST00000540846 HSBP1L1C9JCN9 74 aa8.91□□□□□ -0.98
SMAD3-204ENST00000540846 RHOHQ15669 191 aa8.91□□□□□ -0.98
SMAD3-204ENST00000540846 RRN3P1Q2M238 152 aa8.91□□□□□ -0.98
SMAD3-204ENST00000540846 SBSPONQ8IVN8 264 aa8.91□□□□□ -0.98
SMAD3-204ENST00000540846 RNF183Q96D59 192 aa8.91□□□□□ -0.98
SMAD3-204ENST00000540846 UQCR10Q9UDW1 63 aa8.91□□□□□ -0.98
SMAD3-204ENST00000540846 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.9□□□□□ -0.98
SMAD3-204ENST00000540846 TSHBP01222 138 aa8.9□□□□□ -0.98
SMAD3-204ENST00000540846 PRSS1P07477 247 aa8.9□□□□□ -0.98
SMAD3-204ENST00000540846 Q6ZSN1 163 aa8.9□□□□□ -0.98
SMAD3-204ENST00000540846 Q6ZTI0 123 aa8.9□□□□□ -0.98
SMAD3-204ENST00000540846 C14orf144Q96I85 54 aa8.9□□□□□ -0.98
SMAD3-204ENST00000540846 SCGB3A1Q96QR1 104 aa8.9□□□□□ -0.98
SMAD3-204ENST00000540846 OVOL2Q9BRP0 275 aa8.9□□□□□ -0.98
SMAD3-204ENST00000540846 ZMAT4Q9H898 229 aa8.9□□□□□ -0.98
SMAD3-204ENST00000540846 CYSLTR1Q9Y271 337 aa8.9□□□□□ -0.98
SMAD3-204ENST00000540846 TRAV4A0A0B4J268 109 aa8.9□□□□□ -0.99
SMAD3-204ENST00000540846 I3L3M4 83 aa8.9□□□□□ -0.99
SMAD3-204ENST00000540846 P0DMU3 169 aa8.9□□□□□ -0.99
SMAD3-204ENST00000540846 FAM231AP0DMU4 169 aa8.9□□□□□ -0.99
SMAD3-204ENST00000540846 FAM231CP0DMU5 169 aa8.9□□□□□ -0.99
SMAD3-204ENST00000540846 ERASQ7Z444 233 aa8.9□□□□□ -0.99
SMAD3-204ENST00000540846 DKK2Q9UBU2 259 aa8.9□□□□□ -0.99
SMAD3-204ENST00000540846 TP53TG1Q9Y2A0 90 aa8.9□□□□□ -0.99
SMAD3-204ENST00000540846 PRKDCP78527 4128 aaKnown RBP8.89□□□□□ -0.99
SMAD3-204ENST00000540846 FBN3Q75N90 2809 aa8.89□□□□□ -0.99
SMAD3-204ENST00000540846 TRAV12-1A0A0B4J245 112 aa8.89□□□□□ -0.99
SMAD3-204ENST00000540846 DEFB121Q5J5C9 76 aa8.89□□□□□ -0.99
SMAD3-204ENST00000540846 OR4C5Q8NGB2 326 aa8.89□□□□□ -0.99
SMAD3-204ENST00000540846 MRAPQ8TCY5 172 aa8.89□□□□□ -0.99
SMAD3-204ENST00000540846 DNAJC30Q96LL9 226 aa8.89□□□□□ -0.99
SMAD3-204ENST00000540846 TM2D3Q9BRN9 247 aa8.89□□□□□ -0.99
SMAD3-204ENST00000540846 RETNQ9HD89 108 aa8.89□□□□□ -0.99
SMAD3-204ENST00000540846 NOP10Q9NPE3 64 aaKnown RBP8.89□□□□□ -0.99
SMAD3-204ENST00000540846 A0A087WX48 190 aa8.88□□□□□ -0.99
SMAD3-204ENST00000540846 Q6ZN92 141 aa8.88□□□□□ -0.99
SMAD3-204ENST00000540846 NEXN-AS1Q8NBZ9 246 aa8.88□□□□□ -0.99
SMAD3-204ENST00000540846 TNFRSF18Q9Y5U5 241 aa8.88□□□□□ -0.99
SMAD3-204ENST00000540846 IGIPA6NJ69 53 aa8.87□□□□□ -0.99
SMAD3-204ENST00000540846 DPM2O94777 84 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms