RNA–Protein interactions for RNA: ENST00000540803.1

RAB35-204, Transcript of RAB35, member RAS oncogene family, humanhuman

TSL 2

Gene RAB35, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB35-204ENST00000540803 TMEM250H0YL14 139 aa12.76□□□□□ -0.37
RAB35-204ENST00000540803 LYZL1Q6UWQ5 148 aa12.76□□□□□ -0.37
RAB35-204ENST00000540803 KRTAP4-5Q9BYR2 181 aa12.76□□□□□ -0.37
RAB35-204ENST00000540803 RNASE7Q9H1E1 156 aaKnown RBP12.76□□□□□ -0.37
RAB35-204ENST00000540803 TRAV8-3A0A0A6YYJ7 113 aa12.75□□□□□ -0.37
RAB35-204ENST00000540803 URGCP-MRPS24S4R325 110 aa12.75□□□□□ -0.37
RAB35-204ENST00000540803 TRBV6-8A0A0A6YYG3 113 aa12.74□□□□□ -0.37
RAB35-204ENST00000540803 MGPP08493 103 aa12.74□□□□□ -0.37
RAB35-204ENST00000540803 CTRLP40313 264 aa12.74□□□□□ -0.37
RAB35-204ENST00000540803 TOR2AQ5JU69 321 aa12.74□□□□□ -0.37
RAB35-204ENST00000540803 MAPKAPK5-AS1Q8N8E1 139 aa12.74□□□□□ -0.37
RAB35-204ENST00000540803 TM2D2Q9BX73 214 aa12.74□□□□□ -0.37
RAB35-204ENST00000540803 RPP21Q9H633 154 aaKnown RBP12.74□□□□□ -0.37
RAB35-204ENST00000540803 CHCHD7Q9BUK0 85 aa12.73□□□□□ -0.37
RAB35-204ENST00000540803 FAT1Q14517 4588 aa12.72□□□□□ -0.37
RAB35-204ENST00000540803 A0A087WX48 190 aa12.72□□□□□ -0.37
RAB35-204ENST00000540803 M0QY20 66 aa12.72□□□□□ -0.37
RAB35-204ENST00000540803 NTF3P20783 257 aa12.72□□□□□ -0.37
RAB35-204ENST00000540803 KRTAP10-1P60331 282 aa12.72□□□□□ -0.37
RAB35-204ENST00000540803 SUMO4Q6EEV6 95 aa12.72□□□□□ -0.37
RAB35-204ENST00000540803 Q8N814 137 aa12.72□□□□□ -0.37
RAB35-204ENST00000540803 DNAJC30Q96LL9 226 aa12.72□□□□□ -0.37
RAB35-204ENST00000540803 KLK12Q9UKR0 248 aa12.72□□□□□ -0.37
RAB35-204ENST00000540803 TRGC1P0CF51 173 aa12.71□□□□□ -0.37
RAB35-204ENST00000540803 WFDC2Q14508 124 aa12.71□□□□□ -0.37
RAB35-204ENST00000540803 WDR73Q6P4I2 378 aa12.71□□□□□ -0.37
RAB35-204ENST00000540803 NTM-AS1Q6ZSK4 140 aa12.71□□□□□ -0.37
RAB35-204ENST00000540803 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.71□□□□□ -0.37
RAB35-204ENST00000540803 CNFNQ9BYD5 112 aa12.71□□□□□ -0.37
RAB35-204ENST00000540803 CEBPGP53567 150 aa12.7□□□□□ -0.38
RAB35-204ENST00000540803 KCNIP4Q6PIL6 250 aa12.7□□□□□ -0.38
RAB35-204ENST00000540803 NTN5Q8WTR8 489 aaPredicted RBP12.7□□□□□ -0.38
RAB35-204ENST00000540803 FAM210AQ96ND0 272 aa12.7□□□□□ -0.38
RAB35-204ENST00000540803 EIF5A2Q9GZV4 153 aaKnown RBP12.7□□□□□ -0.38
RAB35-204ENST00000540803 IGLV5-52A0A0A0MRZ9 124 aa12.69□□□□□ -0.38
RAB35-204ENST00000540803 TMEM262E9PQX1 116 aa12.69□□□□□ -0.38
RAB35-204ENST00000540803 H7C1H1 209 aa12.69□□□□□ -0.38
RAB35-204ENST00000540803 NDUFS6O75380 124 aaKnown RBP12.69□□□□□ -0.38
RAB35-204ENST00000540803 GCSHP23434 173 aa12.69□□□□□ -0.38
RAB35-204ENST00000540803 GTSF1Q8WW33 167 aa12.69□□□□□ -0.38
RAB35-204ENST00000540803 UBE2WQ96B02 151 aa12.69□□□□□ -0.38
RAB35-204ENST00000540803 DPH3P1Q9H4G8 78 aa12.69□□□□□ -0.38
RAB35-204ENST00000540803 ELOBQ15370 118 aa12.68□□□□□ -0.38
RAB35-204ENST00000540803 TWIST1Q15672 202 aa12.68□□□□□ -0.38
RAB35-204ENST00000540803 MPV17L2Q567V2 206 aa12.68□□□□□ -0.38
RAB35-204ENST00000540803 TMEM97Q5BJF2 176 aa12.68□□□□□ -0.38
RAB35-204ENST00000540803 FAM231DQ6ZW35 169 aa12.68□□□□□ -0.38
RAB35-204ENST00000540803 Q8N1X5 172 aa12.68□□□□□ -0.38
RAB35-204ENST00000540803 GATCO43716 136 aaKnown RBP12.67□□□□□ -0.38
RAB35-204ENST00000540803 XGP55808 180 aa12.67□□□□□ -0.38
RAB35-204ENST00000540803 RASL11AQ6T310 242 aa12.67□□□□□ -0.38
RAB35-204ENST00000540803 RMI2Q96E14 147 aa12.67□□□□□ -0.38
RAB35-204ENST00000540803 CHCHD5Q9BSY4 110 aa12.67□□□□□ -0.38
RAB35-204ENST00000540803 COX11Q9Y6N1 276 aa12.67□□□□□ -0.38
RAB35-204ENST00000540803 IGKV2D-24A0A075B6R9 120 aa12.66□□□□□ -0.38
RAB35-204ENST00000540803 LECT2O14960 151 aa12.66□□□□□ -0.38
RAB35-204ENST00000540803 SRP19P09132 144 aaKnown RBP12.66□□□□□ -0.38
RAB35-204ENST00000540803 ATRAIDQ6UW56 229 aa12.66□□□□□ -0.38
RAB35-204ENST00000540803 SMIM7Q9BQ49 75 aa12.66□□□□□ -0.38
RAB35-204ENST00000540803 TRBV25-1A0A075B6N4 114 aa12.65□□□□□ -0.38
RAB35-204ENST00000540803 LINC01551Q86U37 167 aa12.65□□□□□ -0.38
RAB35-204ENST00000540803 C15orf54Q8N8G6 183 aa12.65□□□□□ -0.38
RAB35-204ENST00000540803 BAALCQ8WXS3 180 aa12.65□□□□□ -0.38
RAB35-204ENST00000540803 PKIAP61925 76 aa12.64□□□□□ -0.39
RAB35-204ENST00000540803 Q0VG73 95 aa12.64□□□□□ -0.39
RAB35-204ENST00000540803 IQCJQ1A5X6 159 aa12.64□□□□□ -0.39
RAB35-204ENST00000540803 ENHOQ6UWT2 76 aa12.64□□□□□ -0.39
RAB35-204ENST00000540803 Q8N976 141 aa12.64□□□□□ -0.39
RAB35-204ENST00000540803 NIT2Q9NQR4 276 aa12.64□□□□□ -0.39
RAB35-204ENST00000540803 ZNF727A8MUV8 499 aa12.63□□□□□ -0.39
RAB35-204ENST00000540803 A8MWL6 223 aa12.63□□□□□ -0.39
RAB35-204ENST00000540803 ANGP03950 147 aaKnown RBP12.63□□□□□ -0.39
RAB35-204ENST00000540803 GAGE6Q13070 117 aa12.63□□□□□ -0.39
RAB35-204ENST00000540803 CT83Q5H943 113 aa12.63□□□□□ -0.39
RAB35-204ENST00000540803 IGHV1-24A0A0C4DH33 117 aa12.62□□□□□ -0.39
RAB35-204ENST00000540803 RBX1P62877 108 aa12.62□□□□□ -0.39
RAB35-204ENST00000540803 PGLYRP4Q96LB8 373 aa12.62□□□□□ -0.39
RAB35-204ENST00000540803 TRAV26-2A0A0B4J265 109 aa12.61□□□□□ -0.39
RAB35-204ENST00000540803 CRPP02741 224 aa12.61□□□□□ -0.39
RAB35-204ENST00000540803 FOXA3P55318 350 aaPredicted RBP12.61□□□□□ -0.39
RAB35-204ENST00000540803 TEX261Q6UWH6 196 aa12.61□□□□□ -0.39
RAB35-204ENST00000540803 GATD1Q8NB37 220 aa12.61□□□□□ -0.39
RAB35-204ENST00000540803 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.6□□□□□ -0.39
RAB35-204ENST00000540803 C1orf43Q9BWL3 253 aa12.6□□□□□ -0.39
RAB35-204ENST00000540803 OSTCQ9NRP0 149 aa12.6□□□□□ -0.39
RAB35-204ENST00000540803 SMIM15Q7Z3B0 74 aa12.59□□□□□ -0.39
RAB35-204ENST00000540803 DEFB104AQ8WTQ1 72 aa12.59□□□□□ -0.39
RAB35-204ENST00000540803 FRZBQ92765 325 aa12.59□□□□□ -0.39
RAB35-204ENST00000540803 PRR34Q9NV39 138 aa12.59□□□□□ -0.39
RAB35-204ENST00000540803 VPS13BQ7Z7G8 4022 aa12.59□□□□□ -0.39
RAB35-204ENST00000540803 C9JQL5 133 aa12.58□□□□□ -0.4
RAB35-204ENST00000540803 TSKUQ8WUA8 353 aa12.58□□□□□ -0.4
RAB35-204ENST00000540803 TMEM243Q9BU79 118 aa12.58□□□□□ -0.4
RAB35-204ENST00000540803 TMEM70Q9BUB7 260 aa12.58□□□□□ -0.4
RAB35-204ENST00000540803 HIGD1CA8MV81 97 aa12.57□□□□□ -0.4
RAB35-204ENST00000540803 HAMPP81172 84 aa12.57□□□□□ -0.4
RAB35-204ENST00000540803 MIAQ16674 131 aa12.57□□□□□ -0.4
RAB35-204ENST00000540803 CLPSL2Q6UWE3 100 aa12.57□□□□□ -0.4
RAB35-204ENST00000540803 LINC00269Q8N2A0 174 aa12.57□□□□□ -0.4
RAB35-204ENST00000540803 RPL39LQ96EH5 51 aaKnown RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms