RNA–Protein interactions for RNA: ENST00000540784.5

DDB1-218, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,119 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-218ENST00000540784 LINC00694P0DN24 101 aa10.65□□□□□ -0.7
DDB1-218ENST00000540784 UBE2D3P61077 147 aa10.65□□□□□ -0.7
DDB1-218ENST00000540784 UBE2D2P62837 147 aa10.65□□□□□ -0.7
DDB1-218ENST00000540784 NDUFA5Q16718 116 aa10.65□□□□□ -0.7
DDB1-218ENST00000540784 MRPL54Q6P161 138 aaKnown RBP10.65□□□□□ -0.7
DDB1-218ENST00000540784 SLC7A5P1Q8MH63 180 aa10.65□□□□□ -0.7
DDB1-218ENST00000540784 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.65□□□□□ -0.7
DDB1-218ENST00000540784 CLRN3Q8NCR9 226 aa10.65□□□□□ -0.7
DDB1-218ENST00000540784 IMMP2LQ96T52 175 aa10.65□□□□□ -0.7
DDB1-218ENST00000540784 NIT2Q9NQR4 276 aa10.65□□□□□ -0.7
DDB1-218ENST00000540784 SACSQ9NZJ4 4579 aa10.64□□□□□ -0.71
DDB1-218ENST00000540784 APOC3P02656 99 aa10.64□□□□□ -0.71
DDB1-218ENST00000540784 GATD1Q8NB37 220 aa10.64□□□□□ -0.71
DDB1-218ENST00000540784 A0A087WWC5 75 aa10.63□□□□□ -0.71
DDB1-218ENST00000540784 TRAV8-6A0A0B4J262 113 aa10.63□□□□□ -0.71
DDB1-218ENST00000540784 TRAV26-2A0A0B4J265 109 aa10.63□□□□□ -0.71
DDB1-218ENST00000540784 M0R2N4 97 aa10.63□□□□□ -0.71
DDB1-218ENST00000540784 RAB4AP20338 218 aa10.63□□□□□ -0.71
DDB1-218ENST00000540784 HBBP68871 147 aa10.63□□□□□ -0.71
DDB1-218ENST00000540784 LELP1Q5T871 98 aa10.63□□□□□ -0.71
DDB1-218ENST00000540784 ATP5L2Q7Z4Y8 100 aa10.63□□□□□ -0.71
DDB1-218ENST00000540784 FRZBQ92765 325 aa10.63□□□□□ -0.71
DDB1-218ENST00000540784 TMEM242Q9NWH2 141 aa10.63□□□□□ -0.71
DDB1-218ENST00000540784 SIVA1O15304 175 aa10.62□□□□□ -0.71
DDB1-218ENST00000540784 RHEBQ15382 184 aa10.62□□□□□ -0.71
DDB1-218ENST00000540784 OR10J3Q5JRS4 329 aa10.62□□□□□ -0.71
DDB1-218ENST00000540784 KCNIP4Q6PIL6 250 aa10.62□□□□□ -0.71
DDB1-218ENST00000540784 DAZ4Q86SG3 579 aaKnown RBP10.62□□□□□ -0.71
DDB1-218ENST00000540784 AMN1Q8IY45 258 aa10.62□□□□□ -0.71
DDB1-218ENST00000540784 RNF185Q96GF1 192 aa10.62□□□□□ -0.71
DDB1-218ENST00000540784 BTF3L4Q96K17 158 aa10.62□□□□□ -0.71
DDB1-218ENST00000540784 RPS10P5Q9NQ39 176 aa10.62□□□□□ -0.71
DDB1-218ENST00000540784 DAZ3Q9NR90 486 aaKnown RBP10.62□□□□□ -0.71
DDB1-218ENST00000540784 IGHV3-38A0A0C4DH36 116 aa10.61□□□□□ -0.71
DDB1-218ENST00000540784 A0A1B0GXF2 115 aa10.61□□□□□ -0.71
DDB1-218ENST00000540784 FAM104BQ5XKR9 115 aa10.61□□□□□ -0.71
DDB1-218ENST00000540784 SVBPQ8N300 66 aa10.61□□□□□ -0.71
DDB1-218ENST00000540784 MRAP2Q96G30 205 aa10.61□□□□□ -0.71
DDB1-218ENST00000540784 NBDYA0A0U1RRE5 68 aa10.6□□□□□ -0.71
DDB1-218ENST00000540784 SNAPINO95295 136 aa10.6□□□□□ -0.71
DDB1-218ENST00000540784 S100PP25815 95 aa10.6□□□□□ -0.71
DDB1-218ENST00000540784 TRAV9-2A0A087WT02 112 aa10.59□□□□□ -0.71
DDB1-218ENST00000540784 TMEM97Q5BJF2 176 aa10.59□□□□□ -0.71
DDB1-218ENST00000540784 WFDC10BQ8IUB3 73 aa10.59□□□□□ -0.71
DDB1-218ENST00000540784 RPL39LQ96EH5 51 aaKnown RBP10.59□□□□□ -0.71
DDB1-218ENST00000540784 HYDINQ4G0P3 5121 aa10.59□□□□□ -0.71
DDB1-218ENST00000540784 RYR2Q92736 4967 aa10.58□□□□□ -0.72
DDB1-218ENST00000540784 TRAV9-1A0A075B6T8 112 aa10.58□□□□□ -0.72
DDB1-218ENST00000540784 MRPL51Q4U2R6 128 aaKnown RBP10.58□□□□□ -0.72
DDB1-218ENST00000540784 Q6ZR54 194 aa10.58□□□□□ -0.72
DDB1-218ENST00000540784 TRBV6-8A0A0A6YYG3 113 aa10.57□□□□□ -0.72
DDB1-218ENST00000540784 GAS8-AS1O95177 125 aa10.57□□□□□ -0.72
DDB1-218ENST00000540784 PPP1R17O96001 155 aa10.57□□□□□ -0.72
DDB1-218ENST00000540784 TTC32Q5I0X7 151 aa10.57□□□□□ -0.72
DDB1-218ENST00000540784 ST20Q9HBF5 79 aa10.57□□□□□ -0.72
DDB1-218ENST00000540784 URGCP-MRPS24S4R325 110 aa10.57□□□□□ -0.72
DDB1-218ENST00000540784 TRBV6-5A0A0K0K1A5 114 aa10.56□□□□□ -0.72
DDB1-218ENST00000540784 SMKR1H3BMG3 65 aa10.56□□□□□ -0.72
DDB1-218ENST00000540784 DNAH10OSP0CZ25 163 aa10.56□□□□□ -0.72
DDB1-218ENST00000540784 CKS2P33552 79 aa10.56□□□□□ -0.72
DDB1-218ENST00000540784 K7EP13 123 aa10.55□□□□□ -0.72
DDB1-218ENST00000540784 NTM-AS1Q6ZSK4 140 aa10.55□□□□□ -0.72
DDB1-218ENST00000540784 KMT2AQ03164 3969 aa10.54□□□□□ -0.72
DDB1-218ENST00000540784 RYR3Q15413 4870 aa10.54□□□□□ -0.72
DDB1-218ENST00000540784 SDHAF1A6NFY7 115 aa10.54□□□□□ -0.72
DDB1-218ENST00000540784 TMEM262E9PQX1 116 aa10.54□□□□□ -0.72
DDB1-218ENST00000540784 NCR2O95944 276 aa10.54□□□□□ -0.72
DDB1-218ENST00000540784 PMCHP20382 165 aa10.54□□□□□ -0.72
DDB1-218ENST00000540784 RPS10P46783 165 aaKnown RBP10.54□□□□□ -0.72
DDB1-218ENST00000540784 LINC01556Q5JQF7 62 aa10.54□□□□□ -0.72
DDB1-218ENST00000540784 TRBV25-1A0A075B6N4 114 aa10.53□□□□□ -0.72
DDB1-218ENST00000540784 IGHV1-24A0A0C4DH33 117 aa10.53□□□□□ -0.72
DDB1-218ENST00000540784 I3L3M4 83 aa10.53□□□□□ -0.72
DDB1-218ENST00000540784 IGHV3-30P01768 117 aa10.53□□□□□ -0.72
DDB1-218ENST00000540784 IGHV3-33P01772 117 aa10.53□□□□□ -0.72
DDB1-218ENST00000540784 PPBPP02775 128 aa10.53□□□□□ -0.72
DDB1-218ENST00000540784 IGHV3-30-3P0DP02 117 aa10.53□□□□□ -0.72
DDB1-218ENST00000540784 IGHV3-30-5P0DP03 117 aa10.53□□□□□ -0.72
DDB1-218ENST00000540784 COTL1Q14019 142 aa10.53□□□□□ -0.72
DDB1-218ENST00000540784 C1orf134Q5TEV5 83 aa10.53□□□□□ -0.72
DDB1-218ENST00000540784 NRACQ8N912 160 aa10.53□□□□□ -0.72
DDB1-218ENST00000540784 DEFB104AQ8WTQ1 72 aa10.53□□□□□ -0.72
DDB1-218ENST00000540784 CHCHD5Q9BSY4 110 aa10.53□□□□□ -0.72
DDB1-218ENST00000540784 DNAH6Q9C0G6 4158 aa10.53□□□□□ -0.72
DDB1-218ENST00000540784 A0A087WX48 190 aa10.52□□□□□ -0.73
DDB1-218ENST00000540784 D6R8Y8 96 aa10.52□□□□□ -0.73
DDB1-218ENST00000540784 VCYO14598 125 aa10.52□□□□□ -0.73
DDB1-218ENST00000540784 IQCJQ1A5X6 159 aa10.52□□□□□ -0.73
DDB1-218ENST00000540784 TMEM136Q6ZRR5 245 aa10.52□□□□□ -0.73
DDB1-218ENST00000540784 NIT1Q86X76 327 aa10.52□□□□□ -0.73
DDB1-218ENST00000540784 TMEM70Q9BUB7 260 aa10.52□□□□□ -0.73
DDB1-218ENST00000540784 TRBV24-1A0A075B6N3 115 aa10.51□□□□□ -0.73
DDB1-218ENST00000540784 POLR2KP53803 58 aaKnown RBP10.51□□□□□ -0.73
DDB1-218ENST00000540784 ORMDL3Q8N138 153 aa10.51□□□□□ -0.73
DDB1-218ENST00000540784 C10orf126Q8N4M7 172 aa10.51□□□□□ -0.73
DDB1-218ENST00000540784 C20orf78Q9BR46 151 aa10.51□□□□□ -0.73
DDB1-218ENST00000540784 KRTAP1-5Q9BYS1 174 aa10.51□□□□□ -0.73
DDB1-218ENST00000540784 TNFRSF6BO95407 300 aa10.5□□□□□ -0.73
DDB1-218ENST00000540784 BTF3P20290 206 aaKnown RBP10.5□□□□□ -0.73
DDB1-218ENST00000540784 AMTP48728 403 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 86 ms