RNA–Protein interactions for RNA: ENST00000540251.5

NEK2-205, Transcript of NIMA related kinase 2, humanhuman

TSL 1 (best) BASIC

Gene NEK2, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK2-205ENST00000540251 LGALS9CQ6DKI2 356 aa12.73□□□□□ -0.37
NEK2-205ENST00000540251 RPL36ALQ969Q0 106 aaKnown RBP12.73□□□□□ -0.37
NEK2-205ENST00000540251 P0DMU3 169 aa12.72□□□□□ -0.37
NEK2-205ENST00000540251 FAM231AP0DMU4 169 aa12.72□□□□□ -0.37
NEK2-205ENST00000540251 FAM231CP0DMU5 169 aa12.72□□□□□ -0.37
NEK2-205ENST00000540251 UBE2D3P61077 147 aa12.72□□□□□ -0.37
NEK2-205ENST00000540251 UBE2D2P62837 147 aa12.72□□□□□ -0.37
NEK2-205ENST00000540251 URGCP-MRPS24S4R325 110 aa12.72□□□□□ -0.37
NEK2-205ENST00000540251 TRBV6-5A0A0K0K1A5 114 aa12.71□□□□□ -0.37
NEK2-205ENST00000540251 MRPL51Q4U2R6 128 aaKnown RBP12.71□□□□□ -0.37
NEK2-205ENST00000540251 TMEM136Q6ZRR5 245 aa12.71□□□□□ -0.37
NEK2-205ENST00000540251 GNB1LQ9BYB4 327 aa12.71□□□□□ -0.37
NEK2-205ENST00000540251 SMCO4Q9NRQ5 59 aa12.71□□□□□ -0.37
NEK2-205ENST00000540251 LYSTQ99698 3801 aa12.71□□□□□ -0.38
NEK2-205ENST00000540251 PPP1R17O96001 155 aa12.7□□□□□ -0.38
NEK2-205ENST00000540251 PPBPP02775 128 aa12.7□□□□□ -0.38
NEK2-205ENST00000540251 ESRGQ1W209 222 aa12.7□□□□□ -0.38
NEK2-205ENST00000540251 LYPD5Q6UWN5 251 aa12.7□□□□□ -0.38
NEK2-205ENST00000540251 ATP6V0E2Q8NHE4 81 aa12.7□□□□□ -0.38
NEK2-205ENST00000540251 ZNRF2Q8NHG8 242 aa12.7□□□□□ -0.38
NEK2-205ENST00000540251 GAGE12JA6NER3 117 aa12.69□□□□□ -0.38
NEK2-205ENST00000540251 S100A1P23297 94 aa12.69□□□□□ -0.38
NEK2-205ENST00000540251 GAGE1Q13065 139 aa12.69□□□□□ -0.38
NEK2-205ENST00000540251 GAGE4Q13068 117 aa12.69□□□□□ -0.38
NEK2-205ENST00000540251 GAGE5Q13069 117 aa12.69□□□□□ -0.38
NEK2-205ENST00000540251 GAGE13Q4V321 117 aa12.69□□□□□ -0.38
NEK2-205ENST00000540251 UPK3BQ9BT76 320 aa12.69□□□□□ -0.38
NEK2-205ENST00000540251 GTSF1LQ9H1H1 148 aa12.69□□□□□ -0.38
NEK2-205ENST00000540251 TRAV26-2A0A0B4J265 109 aa12.68□□□□□ -0.38
NEK2-205ENST00000540251 HLA-DQA1P01909 254 aa12.68□□□□□ -0.38
NEK2-205ENST00000540251 CCL18P55774 89 aa12.68□□□□□ -0.38
NEK2-205ENST00000540251 DAZ4Q86SG3 579 aaKnown RBP12.68□□□□□ -0.38
NEK2-205ENST00000540251 DAZ3Q9NR90 486 aaKnown RBP12.68□□□□□ -0.38
NEK2-205ENST00000540251 PHOX2AO14813 284 aa12.67□□□□□ -0.38
NEK2-205ENST00000540251 MT-ND6P03923 174 aa12.67□□□□□ -0.38
NEK2-205ENST00000540251 NRACQ8N912 160 aa12.67□□□□□ -0.38
NEK2-205ENST00000540251 LINC00476Q8WZB0 136 aa12.67□□□□□ -0.38
NEK2-205ENST00000540251 LINC00588Q9Y4M8 146 aa12.67□□□□□ -0.38
NEK2-205ENST00000540251 TNFRSF18Q9Y5U5 241 aa12.67□□□□□ -0.38
NEK2-205ENST00000540251 GAS8-AS1O95177 125 aa12.66□□□□□ -0.38
NEK2-205ENST00000540251 MRPS16Q9Y3D3 137 aaKnown RBP12.66□□□□□ -0.38
NEK2-205ENST00000540251 TGIF2-C20orf24A0A0A6YYL0 155 aa12.65□□□□□ -0.38
NEK2-205ENST00000540251 RPS10P46783 165 aaKnown RBP12.65□□□□□ -0.38
NEK2-205ENST00000540251 POLR2KP53803 58 aaKnown RBP12.65□□□□□ -0.38
NEK2-205ENST00000540251 RPL32P62910 135 aaKnown RBP12.65□□□□□ -0.38
NEK2-205ENST00000540251 TMEM97Q5BJF2 176 aa12.65□□□□□ -0.38
NEK2-205ENST00000540251 CBLN2Q8IUK8 224 aa12.65□□□□□ -0.38
NEK2-205ENST00000540251 RPL39LQ96EH5 51 aaKnown RBP12.65□□□□□ -0.38
NEK2-205ENST00000540251 LAMTOR2Q9Y2Q5 125 aa12.65□□□□□ -0.38
NEK2-205ENST00000540251 PRSS47A8MTI9 375 aa12.64□□□□□ -0.39
NEK2-205ENST00000540251 ATP6V1G1O75348 118 aa12.64□□□□□ -0.39
NEK2-205ENST00000540251 CKS2P33552 79 aa12.64□□□□□ -0.39
NEK2-205ENST00000540251 LELP1Q5T871 98 aa12.64□□□□□ -0.39
NEK2-205ENST00000540251 ORMDL3Q8N138 153 aa12.64□□□□□ -0.39
NEK2-205ENST00000540251 C20orf78Q9BR46 151 aa12.64□□□□□ -0.39
NEK2-205ENST00000540251 TRBV27A0A0K0K1C4 114 aa12.63□□□□□ -0.39
NEK2-205ENST00000540251 OR10J3Q5JRS4 329 aa12.63□□□□□ -0.39
NEK2-205ENST00000540251 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.63□□□□□ -0.39
NEK2-205ENST00000540251 ALMS1Q8TCU4 4167 aa12.63□□□□□ -0.39
NEK2-205ENST00000540251 VPS13DQ5THJ4 4388 aa12.63□□□□□ -0.39
NEK2-205ENST00000540251 LCE6AA0A183 80 aa12.62□□□□□ -0.39
NEK2-205ENST00000540251 D6R8Y8 96 aa12.62□□□□□ -0.39
NEK2-205ENST00000540251 TMEM70Q9BUB7 260 aa12.62□□□□□ -0.39
NEK2-205ENST00000540251 SDHAF1A6NFY7 115 aa12.62□□□□□ -0.39
NEK2-205ENST00000540251 SMKR1H3BMG3 65 aa12.62□□□□□ -0.39
NEK2-205ENST00000540251 TNFRSF6BO95407 300 aa12.62□□□□□ -0.39
NEK2-205ENST00000540251 ST20Q9HBF5 79 aa12.62□□□□□ -0.39
NEK2-205ENST00000540251 DNAH1Q9P2D7 4330 aa12.61□□□□□ -0.39
NEK2-205ENST00000540251 NCR2O95944 276 aa12.61□□□□□ -0.39
NEK2-205ENST00000540251 APCSP02743 223 aa12.61□□□□□ -0.39
NEK2-205ENST00000540251 SUMO2P61956 95 aaKnown RBP12.61□□□□□ -0.39
NEK2-205ENST00000540251 NTM-AS1Q6ZSK4 140 aa12.61□□□□□ -0.39
NEK2-205ENST00000540251 TRBV6-8A0A0A6YYG3 113 aa12.6□□□□□ -0.39
NEK2-205ENST00000540251 PRELID3AQ96N28 172 aa12.6□□□□□ -0.39
NEK2-205ENST00000540251 COLCA2A8K830 154 aa12.59□□□□□ -0.39
NEK2-205ENST00000540251 I3L3M4 83 aa12.59□□□□□ -0.39
NEK2-205ENST00000540251 VCYO14598 125 aa12.59□□□□□ -0.39
NEK2-205ENST00000540251 NPYP01303 97 aa12.59□□□□□ -0.39
NEK2-205ENST00000540251 IQCJQ1A5X6 159 aa12.59□□□□□ -0.39
NEK2-205ENST00000540251 UBE2DNLQ8IWF7 75 aa12.59□□□□□ -0.39
NEK2-205ENST00000540251 MRPL18Q9H0U6 180 aaKnown RBP12.59□□□□□ -0.39
NEK2-205ENST00000540251 K7EP13 123 aa12.58□□□□□ -0.4
NEK2-205ENST00000540251 TRAV8-6A0A0B4J262 113 aa12.57□□□□□ -0.4
NEK2-205ENST00000540251 IGHV3-38A0A0C4DH36 116 aa12.57□□□□□ -0.4
NEK2-205ENST00000540251 LY6G6CO95867 125 aa12.57□□□□□ -0.4
NEK2-205ENST00000540251 DNAH10OSP0CZ25 163 aa12.57□□□□□ -0.4
NEK2-205ENST00000540251 Q9H8V8 135 aa12.57□□□□□ -0.4
NEK2-205ENST00000540251 TRAPPC1Q9Y5R8 145 aa12.57□□□□□ -0.4
NEK2-205ENST00000540251 DNAH6Q9C0G6 4158 aa12.56□□□□□ -0.4
NEK2-205ENST00000540251 IGLV2-18A0A075B6J9 118 aa12.56□□□□□ -0.4
NEK2-205ENST00000540251 TCAPO15273 167 aa12.56□□□□□ -0.4
NEK2-205ENST00000540251 COTL1Q14019 142 aa12.56□□□□□ -0.4
NEK2-205ENST00000540251 ALKBH7Q9BT30 221 aaPredicted RBP12.56□□□□□ -0.4
NEK2-205ENST00000540251 SMIM2Q9BVW6 85 aa12.56□□□□□ -0.4
NEK2-205ENST00000540251 KMT2AQ03164 3969 aa12.55□□□□□ -0.4
NEK2-205ENST00000540251 SIVA1O15304 175 aa12.55□□□□□ -0.4
NEK2-205ENST00000540251 PMCHP20382 165 aa12.55□□□□□ -0.4
NEK2-205ENST00000540251 FABP9Q0Z7S8 132 aa12.55□□□□□ -0.4
NEK2-205ENST00000540251 CHCHD7Q9BUK0 85 aa12.55□□□□□ -0.4
NEK2-205ENST00000540251 TRBV25-1A0A075B6N4 114 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms