RNA–Protein interactions for RNA: ENST00000540183.1

SEMA4D-222, Transcript of semaphorin 4D, humanhuman

TSL 3

Gene SEMA4D, Length 176 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-222ENST00000540183 G3V3Q6 166 aa9.13□□□□□ -0.95
SEMA4D-222ENST00000540183 PAGE4O60829 102 aa9.13□□□□□ -0.95
SEMA4D-222ENST00000540183 MT1HL1P0DM35 61 aa9.13□□□□□ -0.95
SEMA4D-222ENST00000540183 C9orf163Q8N9P6 203 aa9.13□□□□□ -0.95
SEMA4D-222ENST00000540183 F5H697 171 aa9.12□□□□□ -0.95
SEMA4D-222ENST00000540183 RBX1P62877 108 aa9.12□□□□□ -0.95
SEMA4D-222ENST00000540183 MIAQ16674 131 aa9.12□□□□□ -0.95
SEMA4D-222ENST00000540183 LINC00269Q8N2A0 174 aa9.12□□□□□ -0.95
SEMA4D-222ENST00000540183 STOML3Q8TAV4 291 aa9.12□□□□□ -0.95
SEMA4D-222ENST00000540183 ZNF471Q9BX82 626 aaPredicted RBP9.12□□□□□ -0.95
SEMA4D-222ENST00000540183 A0A1B0GV50 99 aa9.11□□□□□ -0.95
SEMA4D-222ENST00000540183 SCO2A0A1W2PP80 73 aa9.11□□□□□ -0.95
SEMA4D-222ENST00000540183 DGAT2L7PQ6IED9 249 aa9.11□□□□□ -0.95
SEMA4D-222ENST00000540183 SDIM1Q6ZPB5 146 aa9.11□□□□□ -0.95
SEMA4D-222ENST00000540183 PRR34Q9NV39 138 aa9.11□□□□□ -0.95
SEMA4D-222ENST00000540183 KIF25-AS1Q9Y6Z4 181 aa9.11□□□□□ -0.95
SEMA4D-222ENST00000540183 IGLV10-54A0A075B6I4 117 aa9.1□□□□□ -0.95
SEMA4D-222ENST00000540183 SNAI2O43623 268 aa9.1□□□□□ -0.95
SEMA4D-222ENST00000540183 SPANXN1Q5VSR9 72 aa9.1□□□□□ -0.95
SEMA4D-222ENST00000540183 DERL1Q9BUN8 251 aa9.1□□□□□ -0.95
SEMA4D-222ENST00000540183 VAX2Q9UIW0 290 aa9.1□□□□□ -0.95
SEMA4D-222ENST00000540183 TCEAL7Q9BRU2 100 aa9.09□□□□□ -0.95
SEMA4D-222ENST00000540183 MLST8Q9BVC4 326 aa9.09□□□□□ -0.95
SEMA4D-222ENST00000540183 SSBP4Q9BWG4 385 aaPredicted RBP9.09□□□□□ -0.95
SEMA4D-222ENST00000540183 SMLR1H3BR10 107 aa9.08□□□□□ -0.96
SEMA4D-222ENST00000540183 ARPC5O15511 151 aa9.08□□□□□ -0.96
SEMA4D-222ENST00000540183 CXCL1P09341 107 aa9.08□□□□□ -0.96
SEMA4D-222ENST00000540183 CHTF8P0CG12 524 aa9.08□□□□□ -0.96
SEMA4D-222ENST00000540183 BAGE2Q86Y30 109 aa9.08□□□□□ -0.96
SEMA4D-222ENST00000540183 GFRA4Q9GZZ7 299 aa9.08□□□□□ -0.96
SEMA4D-222ENST00000540183 LRP2P98164 4655 aa9.08□□□□□ -0.96
SEMA4D-222ENST00000540183 TRBV25-1A0A075B6N4 114 aa9.07□□□□□ -0.96
SEMA4D-222ENST00000540183 SLPIP03973 132 aa9.07□□□□□ -0.96
SEMA4D-222ENST00000540183 OR5AL1P0C617 328 aa9.07□□□□□ -0.96
SEMA4D-222ENST00000540183 GZMBP10144 247 aa9.07□□□□□ -0.96
SEMA4D-222ENST00000540183 RAB5CP51148 216 aa9.07□□□□□ -0.96
SEMA4D-222ENST00000540183 hDV102S1A0JD36 115 aa9.06□□□□□ -0.96
SEMA4D-222ENST00000540183 MGPP08493 103 aa9.06□□□□□ -0.96
SEMA4D-222ENST00000540183 PKIAP61925 76 aa9.06□□□□□ -0.96
SEMA4D-222ENST00000540183 REG3AQ06141 175 aa9.06□□□□□ -0.96
SEMA4D-222ENST00000540183 CIRBPQ14011 172 aaKnown RBP9.06□□□□□ -0.96
SEMA4D-222ENST00000540183 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.06□□□□□ -0.96
SEMA4D-222ENST00000540183 C20orf203Q8NBC4 194 aa9.06□□□□□ -0.96
SEMA4D-222ENST00000540183 FAM213BQ8TBF2 198 aa9.06□□□□□ -0.96
SEMA4D-222ENST00000540183 SFT2D1Q8WV19 159 aa9.06□□□□□ -0.96
SEMA4D-222ENST00000540183 IGLV4-60A0A075B6I1 120 aa9.05□□□□□ -0.96
SEMA4D-222ENST00000540183 IQCJQ1A5X6 159 aa9.05□□□□□ -0.96
SEMA4D-222ENST00000540183 TMEM97Q5BJF2 176 aa9.05□□□□□ -0.96
SEMA4D-222ENST00000540183 SUMO4Q6EEV6 95 aa9.05□□□□□ -0.96
SEMA4D-222ENST00000540183 IGHV1-24A0A0C4DH33 117 aa9.04□□□□□ -0.96
SEMA4D-222ENST00000540183 M0QY20 66 aa9.04□□□□□ -0.96
SEMA4D-222ENST00000540183 S100A9P06702 114 aaKnown RBP9.04□□□□□ -0.96
SEMA4D-222ENST00000540183 SMIM17P0DL12 118 aa9.04□□□□□ -0.96
SEMA4D-222ENST00000540183 CNBPP62633 177 aaKnown RBP9.04□□□□□ -0.96
SEMA4D-222ENST00000540183 MBD3L1Q8WWY6 194 aa9.04□□□□□ -0.96
SEMA4D-222ENST00000540183 AP1S3Q96PC3 154 aa9.04□□□□□ -0.96
SEMA4D-222ENST00000540183 TPPP3Q9BW30 176 aa9.04□□□□□ -0.96
SEMA4D-222ENST00000540183 A0A087WYN8 130 aa9.03□□□□□ -0.96
SEMA4D-222ENST00000540183 A0A0D9SG52 128 aa9.03□□□□□ -0.96
SEMA4D-222ENST00000540183 NKX2-5P52952 324 aaPredicted RBP9.03□□□□□ -0.96
SEMA4D-222ENST00000540183 ODF1Q14990 250 aa9.03□□□□□ -0.96
SEMA4D-222ENST00000540183 Q6ZRU5 148 aa9.03□□□□□ -0.96
SEMA4D-222ENST00000540183 TMUB2Q71RG4 321 aa9.03□□□□□ -0.96
SEMA4D-222ENST00000540183 CLRN3Q8NCR9 226 aa9.03□□□□□ -0.96
SEMA4D-222ENST00000540183 DPH3Q96FX2 82 aa9.03□□□□□ -0.96
SEMA4D-222ENST00000540183 RNF213Q63HN8 5207 aa9.03□□□□□ -0.96
SEMA4D-222ENST00000540183 IGHV3-64A0A075B6Q5 118 aa9.02□□□□□ -0.97
SEMA4D-222ENST00000540183 PFDN1O60925 122 aa9.02□□□□□ -0.97
SEMA4D-222ENST00000540183 SPACA4Q8TDM5 124 aa9.02□□□□□ -0.97
SEMA4D-222ENST00000540183 IGLC6P0CF74 106 aa9.01□□□□□ -0.97
SEMA4D-222ENST00000540183 RPL35P42766 123 aaKnown RBP9.01□□□□□ -0.97
SEMA4D-222ENST00000540183 CCL20P78556 96 aa9.01□□□□□ -0.97
SEMA4D-222ENST00000540183 KCNRGQ8N5I3 272 aa9.01□□□□□ -0.97
SEMA4D-222ENST00000540183 TMEM243Q9BU79 118 aa9.01□□□□□ -0.97
SEMA4D-222ENST00000540183 PHOX2AO14813 284 aa9□□□□□ -0.97
SEMA4D-222ENST00000540183 FER1L6-AS1Q8NA97 138 aa9□□□□□ -0.97
SEMA4D-222ENST00000540183 TRAV8-4A0A0B4J246 113 aa8.99□□□□□ -0.97
SEMA4D-222ENST00000540183 P01737 135 aa8.99□□□□□ -0.97
SEMA4D-222ENST00000540183 CENPWQ5EE01 88 aa8.99□□□□□ -0.97
SEMA4D-222ENST00000540183 C15orf56Q8N910 161 aa8.99□□□□□ -0.97
SEMA4D-222ENST00000540183 OR2D3Q8NGH3 330 aa8.99□□□□□ -0.97
SEMA4D-222ENST00000540183 AP5S1Q9NUS5 200 aa8.99□□□□□ -0.97
SEMA4D-222ENST00000540183 IGKV3OR2-268A0A0C4DH90 116 aa8.98□□□□□ -0.97
SEMA4D-222ENST00000540183 A0A1B0GUV1 79 aa8.98□□□□□ -0.97
SEMA4D-222ENST00000540183 RAB19A4D1S5 217 aa8.98□□□□□ -0.97
SEMA4D-222ENST00000540183 GAGE12HA6NDE8 117 aa8.98□□□□□ -0.97
SEMA4D-222ENST00000540183 H2AFB1P0C5Y9 115 aa8.98□□□□□ -0.97
SEMA4D-222ENST00000540183 HIGD2BQ4VC39 106 aa8.98□□□□□ -0.97
SEMA4D-222ENST00000540183 RASL11AQ6T310 242 aa8.98□□□□□ -0.97
SEMA4D-222ENST00000540183 PLAC8Q9NZF1 115 aa8.98□□□□□ -0.97
SEMA4D-222ENST00000540183 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.97□□□□□ -0.97
SEMA4D-222ENST00000540183 C19orf71A6NCJ1 209 aa8.97□□□□□ -0.97
SEMA4D-222ENST00000540183 UMAD1C9J7I0 102 aa8.97□□□□□ -0.97
SEMA4D-222ENST00000540183 H7C1H1 209 aa8.97□□□□□ -0.97
SEMA4D-222ENST00000540183 COX6A2Q02221 97 aa8.97□□□□□ -0.97
SEMA4D-222ENST00000540183 C11orf52Q96A22 123 aa8.97□□□□□ -0.97
SEMA4D-222ENST00000540183 GNG13Q9P2W3 67 aa8.97□□□□□ -0.97
SEMA4D-222ENST00000540183 SULT1A2P50226 295 aa8.96□□□□□ -0.98
SEMA4D-222ENST00000540183 CACNG7P62955 275 aa8.96□□□□□ -0.98
SEMA4D-222ENST00000540183 ZNF345Q14585 488 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms