RNA–Protein interactions for RNA: ENST00000540121.5

PRKAB1-205, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

TSL 5 BASIC

Gene PRKAB1, Length 1,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-205ENST00000540121 IGHV4-31P0DP07 118 aa10.03□□□□□ -0.8
PRKAB1-205ENST00000540121 SRD5A1P18405 259 aa10.03□□□□□ -0.8
PRKAB1-205ENST00000540121 PCP4P48539 62 aa10.03□□□□□ -0.8
PRKAB1-205ENST00000540121 SYNJ2BPP57105 145 aa10.03□□□□□ -0.8
PRKAB1-205ENST00000540121 MDFICQ9P1T7 246 aa10.03□□□□□ -0.8
PRKAB1-205ENST00000540121 HOXA3O43365 443 aaPredicted RBP10.02□□□□□ -0.8
PRKAB1-205ENST00000540121 TCTAP57738 103 aa10.02□□□□□ -0.8
PRKAB1-205ENST00000540121 KRTAP10-9P60411 292 aa10.02□□□□□ -0.8
PRKAB1-205ENST00000540121 SCGB2A2Q13296 93 aa10.02□□□□□ -0.8
PRKAB1-205ENST00000540121 RRN3P1Q2M238 152 aa10.02□□□□□ -0.8
PRKAB1-205ENST00000540121 ZNF479Q96JC4 524 aa10.02□□□□□ -0.8
PRKAB1-205ENST00000540121 ZNF815PA8K554 130 aa10.02□□□□□ -0.81
PRKAB1-205ENST00000540121 A8MWV9 139 aa10.02□□□□□ -0.81
PRKAB1-205ENST00000540121 TMEM95Q3KNT9 176 aa10.02□□□□□ -0.81
PRKAB1-205ENST00000540121 LYRM7Q5U5X0 104 aa10.02□□□□□ -0.81
PRKAB1-205ENST00000540121 C20orf203Q8NBC4 194 aa10.02□□□□□ -0.81
PRKAB1-205ENST00000540121 UBE2D1P51668 147 aa10.01□□□□□ -0.81
PRKAB1-205ENST00000540121 TCTEX1D4Q5JR98 221 aa10.01□□□□□ -0.81
PRKAB1-205ENST00000540121 C4orf3Q8WVX3 66 aa10.01□□□□□ -0.81
PRKAB1-205ENST00000540121 VPS25Q9BRG1 176 aa10.01□□□□□ -0.81
PRKAB1-205ENST00000540121 MTORP42345 2549 aa10.01□□□□□ -0.81
PRKAB1-205ENST00000540121 A0A087WWL8 130 aa10□□□□□ -0.81
PRKAB1-205ENST00000540121 J3QR89 54 aa10□□□□□ -0.81
PRKAB1-205ENST00000540121 DLX4Q92988 240 aaPredicted RBP10□□□□□ -0.81
PRKAB1-205ENST00000540121 SPXQ9BT56 116 aa10□□□□□ -0.81
PRKAB1-205ENST00000540121 CCDC168Q8NDH2 2452 aa10□□□□□ -0.81
PRKAB1-205ENST00000540121 TRAV25A0A0B4J276 109 aa9.99□□□□□ -0.81
PRKAB1-205ENST00000540121 ZNF56Q15929 161 aa9.99□□□□□ -0.81
PRKAB1-205ENST00000540121 DEFB113Q30KQ7 82 aa9.99□□□□□ -0.81
PRKAB1-205ENST00000540121 MORN3Q6PF18 240 aaPredicted RBP9.99□□□□□ -0.81
PRKAB1-205ENST00000540121 SCGB1D4Q6XE38 83 aa9.99□□□□□ -0.81
PRKAB1-205ENST00000540121 SLC25A29Q8N8R3 303 aa9.99□□□□□ -0.81
PRKAB1-205ENST00000540121 DNAJC30Q96LL9 226 aa9.99□□□□□ -0.81
PRKAB1-205ENST00000540121 JPT2Q9H910 190 aa9.99□□□□□ -0.81
PRKAB1-205ENST00000540121 FBN3Q75N90 2809 aa9.99□□□□□ -0.81
PRKAB1-205ENST00000540121 H3BMM0 161 aa9.99□□□□□ -0.81
PRKAB1-205ENST00000540121 M0R2P5 195 aa9.99□□□□□ -0.81
PRKAB1-205ENST00000540121 RHODO00212 210 aa9.99□□□□□ -0.81
PRKAB1-205ENST00000540121 SPRY2O43597 315 aa9.99□□□□□ -0.81
PRKAB1-205ENST00000540121 EDN2P20800 178 aa9.99□□□□□ -0.81
PRKAB1-205ENST00000540121 SPINK13Q1W4C9 94 aa9.99□□□□□ -0.81
PRKAB1-205ENST00000540121 OXLD1Q5BKU9 147 aa9.99□□□□□ -0.81
PRKAB1-205ENST00000540121 A0A0J9YY99 117 aa9.98□□□□□ -0.81
PRKAB1-205ENST00000540121 LEPROTO15243 131 aa9.98□□□□□ -0.81
PRKAB1-205ENST00000540121 SRSF9Q13242 221 aaKnown RBP eCLIP9.98□□□□□ -0.81
PRKAB1-205ENST00000540121 C10orf99Q6UWK7 81 aa9.98□□□□□ -0.81
PRKAB1-205ENST00000540121 PLEKHB2Q96CS7 222 aa9.98□□□□□ -0.81
PRKAB1-205ENST00000540121 TRAV12-2A0A075B6T6 113 aa9.96□□□□□ -0.81
PRKAB1-205ENST00000540121 P0DMU3 169 aa9.96□□□□□ -0.81
PRKAB1-205ENST00000540121 FAM231AP0DMU4 169 aa9.96□□□□□ -0.81
PRKAB1-205ENST00000540121 FAM231CP0DMU5 169 aa9.96□□□□□ -0.81
PRKAB1-205ENST00000540121 ZNF415Q09FC8 603 aa9.96□□□□□ -0.81
PRKAB1-205ENST00000540121 RNF151Q2KHN1 245 aa9.96□□□□□ -0.81
PRKAB1-205ENST00000540121 FAM74A4Q5TZK3 123 aa9.96□□□□□ -0.81
PRKAB1-205ENST00000540121 DUX5Q96PT3 197 aa9.96□□□□□ -0.81
PRKAB1-205ENST00000540121 MUC4Q99102 2169 aa9.96□□□□□ -0.81
PRKAB1-205ENST00000540121 TRBV20-1A0A075B6N2 111 aa9.96□□□□□ -0.82
PRKAB1-205ENST00000540121 TMEM223A0PJW6 202 aa9.96□□□□□ -0.82
PRKAB1-205ENST00000540121 J3QQQ9 107 aa9.96□□□□□ -0.82
PRKAB1-205ENST00000540121 CMC4P56277 68 aaPredicted RBP9.96□□□□□ -0.82
PRKAB1-205ENST00000540121 RPL39P62891 51 aaKnown RBP9.96□□□□□ -0.82
PRKAB1-205ENST00000540121 BEAN1Q3B7T3 259 aa9.96□□□□□ -0.82
PRKAB1-205ENST00000540121 CD300EQ496F6 205 aaPredicted RBP9.96□□□□□ -0.82
PRKAB1-205ENST00000540121 AMELXQ99217 191 aa9.96□□□□□ -0.82
PRKAB1-205ENST00000540121 VCX2Q9H322 139 aa9.96□□□□□ -0.82
PRKAB1-205ENST00000540121 K7ERJ3 54 aa9.95□□□□□ -0.82
PRKAB1-205ENST00000540121 ZNRF2Q8NHG8 242 aa9.95□□□□□ -0.82
PRKAB1-205ENST00000540121 SPANXA1Q9NS26 97 aa9.95□□□□□ -0.82
PRKAB1-205ENST00000540121 MAP1AP78559 2803 aaPredicted RBP9.95□□□□□ -0.82
PRKAB1-205ENST00000540121 DNHD1Q96M86 4753 aa9.95□□□□□ -0.82
PRKAB1-205ENST00000540121 LGALS3P17931 250 aaKnown RBP9.94□□□□□ -0.82
PRKAB1-205ENST00000540121 DEFB131AP59861 70 aa9.94□□□□□ -0.82
PRKAB1-205ENST00000540121 MRPS36P82909 103 aaKnown RBP9.94□□□□□ -0.82
PRKAB1-205ENST00000540121 GAGE13Q4V321 117 aa9.94□□□□□ -0.82
PRKAB1-205ENST00000540121 TMEM170BQ5T4T1 132 aa9.94□□□□□ -0.82
PRKAB1-205ENST00000540121 NRGNQ92686 78 aa9.94□□□□□ -0.82
PRKAB1-205ENST00000540121 NAA38Q9BRA0 125 aaKnown RBP9.94□□□□□ -0.82
PRKAB1-205ENST00000540121 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.93□□□□□ -0.821e-7■■■■■ 38.4
PRKAB1-205ENST00000540121 ATP6V0E2Q8NHE4 81 aa9.93□□□□□ -0.82
PRKAB1-205ENST00000540121 RAX2Q96IS3 184 aa9.93□□□□□ -0.82
PRKAB1-205ENST00000540121 TNFRSF18Q9Y5U5 241 aa9.93□□□□□ -0.82
PRKAB1-205ENST00000540121 IGLV4-3A0A075B6K6 122 aa9.93□□□□□ -0.82
PRKAB1-205ENST00000540121 IGKV3-20P01619 116 aa9.93□□□□□ -0.82
PRKAB1-205ENST00000540121 IGHV3-30P01768 117 aa9.93□□□□□ -0.82
PRKAB1-205ENST00000540121 IGHV3-30-5P0DP03 117 aa9.93□□□□□ -0.82
PRKAB1-205ENST00000540121 UBE2D3P61077 147 aa9.93□□□□□ -0.82
PRKAB1-205ENST00000540121 UBE2D2P62837 147 aa9.93□□□□□ -0.82
PRKAB1-205ENST00000540121 DEFB114Q30KQ6 69 aa9.93□□□□□ -0.82
PRKAB1-205ENST00000540121 RNF183Q96D59 192 aa9.93□□□□□ -0.82
PRKAB1-205ENST00000540121 SAP30O75446 220 aa9.92□□□□□ -0.82
PRKAB1-205ENST00000540121 IGHV3-53P01767 116 aa9.92□□□□□ -0.82
PRKAB1-205ENST00000540121 COTL1Q14019 142 aa9.92□□□□□ -0.82
PRKAB1-205ENST00000540121 NDUFA11Q86Y39 141 aa9.92□□□□□ -0.82
PRKAB1-205ENST00000540121 TIMM21Q9BVV7 248 aa9.92□□□□□ -0.82
PRKAB1-205ENST00000540121 MRPL16Q9NX20 251 aaKnown RBP9.92□□□□□ -0.82
PRKAB1-205ENST00000540121 NIPBLQ6KC79 2804 aaeCLIP9.92□□□□□ -0.828e-8■□□□□ 10.4
PRKAB1-205ENST00000540121 M0QXV9 152 aa9.91□□□□□ -0.82
PRKAB1-205ENST00000540121 KLHL30-AS1Q8NEE0 82 aa9.91□□□□□ -0.82
PRKAB1-205ENST00000540121 DUX3Q96PT4 197 aa9.91□□□□□ -0.82
PRKAB1-205ENST00000540121 PGPEP1Q9NXJ5 209 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms