RNA–Protein interactions for RNA: ENST00000539975.5

SNHG1-212, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 955 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-212ENST00000539975 IGLC6P0CF74 106 aa4.53□□□□□ -1.68
SNHG1-212ENST00000539975 S100PP25815 95 aa4.53□□□□□ -1.68
SNHG1-212ENST00000539975 FAM3BP58499 235 aaPredicted RBP4.53□□□□□ -1.68
SNHG1-212ENST00000539975 RPL36AP83881 106 aaKnown RBP4.53□□□□□ -1.68
SNHG1-212ENST00000539975 KCNIP4Q6PIL6 250 aa4.53□□□□□ -1.68
SNHG1-212ENST00000539975 SLC25A29Q8N8R3 303 aa4.53□□□□□ -1.68
SNHG1-212ENST00000539975 RPL36ALQ969Q0 106 aaKnown RBP4.53□□□□□ -1.68
SNHG1-212ENST00000539975 SEC11CQ9BY50 192 aa4.53□□□□□ -1.68
SNHG1-212ENST00000539975 DPH3P1Q9H4G8 78 aa4.53□□□□□ -1.68
SNHG1-212ENST00000539975 TRBV10-1A0A0K0K1A3 114 aa4.52□□□□□ -1.69
SNHG1-212ENST00000539975 LOC105371267A0A1B0GV96 52 aa4.52□□□□□ -1.69
SNHG1-212ENST00000539975 A0A1B0GW15 77 aa4.52□□□□□ -1.69
SNHG1-212ENST00000539975 K7EQD1 137 aa4.52□□□□□ -1.69
SNHG1-212ENST00000539975 NXPH4O95158 308 aa4.52□□□□□ -1.69
SNHG1-212ENST00000539975 GATA1P15976 413 aaPredicted RBP4.52□□□□□ -1.69
SNHG1-212ENST00000539975 CTRLP40313 264 aa4.52□□□□□ -1.69
SNHG1-212ENST00000539975 FOXA3P55318 350 aaPredicted RBP4.52□□□□□ -1.69
SNHG1-212ENST00000539975 POM121L12Q8N7R1 296 aa4.52□□□□□ -1.69
SNHG1-212ENST00000539975 TNFRSF18Q9Y5U5 241 aa4.52□□□□□ -1.69
SNHG1-212ENST00000539975 V9GYV3 84 aa4.52□□□□□ -1.69
SNHG1-212ENST00000539975 TRAV9-2A0A087WT02 112 aa4.51□□□□□ -1.69
SNHG1-212ENST00000539975 A0A087WWC5 75 aa4.51□□□□□ -1.69
SNHG1-212ENST00000539975 A0A096LPF7 62 aa4.51□□□□□ -1.69
SNHG1-212ENST00000539975 TRAV8-6A0A0B4J262 113 aa4.51□□□□□ -1.69
SNHG1-212ENST00000539975 LCE6AA0A183 80 aa4.51□□□□□ -1.69
SNHG1-212ENST00000539975 GAGE12JA6NER3 117 aa4.51□□□□□ -1.69
SNHG1-212ENST00000539975 CRYGDP07320 174 aa4.51□□□□□ -1.69
SNHG1-212ENST00000539975 GAGE1Q13065 139 aa4.51□□□□□ -1.69
SNHG1-212ENST00000539975 GAGE4Q13068 117 aa4.51□□□□□ -1.69
SNHG1-212ENST00000539975 GAGE5Q13069 117 aa4.51□□□□□ -1.69
SNHG1-212ENST00000539975 SVBPQ8N300 66 aa4.51□□□□□ -1.69
SNHG1-212ENST00000539975 ATP6V0E2Q8NHE4 81 aa4.51□□□□□ -1.69
SNHG1-212ENST00000539975 GTSF1Q8WW33 167 aa4.51□□□□□ -1.69
SNHG1-212ENST00000539975 LINC00476Q8WZB0 136 aa4.51□□□□□ -1.69
SNHG1-212ENST00000539975 VSIG2Q96IQ7 327 aa4.51□□□□□ -1.69
SNHG1-212ENST00000539975 SAMD10Q9BYL1 202 aa4.51□□□□□ -1.69
SNHG1-212ENST00000539975 CTDSP1Q9GZU7 261 aa4.51□□□□□ -1.69
SNHG1-212ENST00000539975 JPT2Q9H910 190 aa4.51□□□□□ -1.69
SNHG1-212ENST00000539975 DNAH3Q8TD57 4116 aa4.51□□□□□ -1.69
SNHG1-212ENST00000539975 COL7A1Q02388 2944 aa4.5□□□□□ -1.69
SNHG1-212ENST00000539975 TRBV7-3A0A075B6L6 115 aa4.5□□□□□ -1.69
SNHG1-212ENST00000539975 SMIM27A0A1W2PRY6 76 aa4.5□□□□□ -1.69
SNHG1-212ENST00000539975 SNAPINO95295 136 aa4.5□□□□□ -1.69
SNHG1-212ENST00000539975 PPP1R17O96001 155 aa4.5□□□□□ -1.69
SNHG1-212ENST00000539975 APOC3P02656 99 aa4.5□□□□□ -1.69
SNHG1-212ENST00000539975 EVI2AP22794 236 aa4.5□□□□□ -1.69
SNHG1-212ENST00000539975 CAMPP49913 170 aa4.5□□□□□ -1.69
SNHG1-212ENST00000539975 RHEBQ15382 184 aa4.5□□□□□ -1.69
SNHG1-212ENST00000539975 TMEM97Q5BJF2 176 aa4.5□□□□□ -1.69
SNHG1-212ENST00000539975 OR10J3Q5JRS4 329 aa4.5□□□□□ -1.69
SNHG1-212ENST00000539975 ZNF575Q86XF7 245 aa4.5□□□□□ -1.69
SNHG1-212ENST00000539975 NUP35Q8NFH5 326 aa4.5□□□□□ -1.69
SNHG1-212ENST00000539975 ZNRF2Q8NHG8 242 aa4.5□□□□□ -1.69
SNHG1-212ENST00000539975 FRZBQ92765 325 aa4.5□□□□□ -1.69
SNHG1-212ENST00000539975 BTF3L4Q96K17 158 aa4.5□□□□□ -1.69
SNHG1-212ENST00000539975 DNAJC30Q96LL9 226 aa4.5□□□□□ -1.69
SNHG1-212ENST00000539975 CNFNQ9BYD5 112 aa4.5□□□□□ -1.69
SNHG1-212ENST00000539975 RPS10P5Q9NQ39 176 aa4.5□□□□□ -1.69
SNHG1-212ENST00000539975 MSRB1Q9NZV6 116 aa4.5□□□□□ -1.69
SNHG1-212ENST00000539975 URGCP-MRPS24S4R325 110 aa4.5□□□□□ -1.69
SNHG1-212ENST00000539975 STAB2Q8WWQ8 2551 aa4.49□□□□□ -1.69
SNHG1-212ENST00000539975 HBBP68871 147 aa4.49□□□□□ -1.69
SNHG1-212ENST00000539975 ESRGQ1W209 222 aa4.49□□□□□ -1.69
SNHG1-212ENST00000539975 TTC32Q5I0X7 151 aa4.49□□□□□ -1.69
SNHG1-212ENST00000539975 UFSP1Q6NVU6 142 aa4.49□□□□□ -1.69
SNHG1-212ENST00000539975 RASL11AQ6T310 242 aa4.49□□□□□ -1.69
SNHG1-212ENST00000539975 LYPD5Q6UWN5 251 aa4.49□□□□□ -1.69
SNHG1-212ENST00000539975 ATP5L2Q7Z4Y8 100 aa4.49□□□□□ -1.69
SNHG1-212ENST00000539975 DAZ4Q86SG3 579 aaKnown RBP4.49□□□□□ -1.69
SNHG1-212ENST00000539975 IMMP2LQ96T52 175 aa4.49□□□□□ -1.69
SNHG1-212ENST00000539975 TMEM191AQ9H0A3 160 aa4.49□□□□□ -1.69
SNHG1-212ENST00000539975 GTSF1LQ9H1H1 148 aa4.49□□□□□ -1.69
SNHG1-212ENST00000539975 Q9H8V8 135 aa4.49□□□□□ -1.69
SNHG1-212ENST00000539975 NIT2Q9NQR4 276 aa4.49□□□□□ -1.69
SNHG1-212ENST00000539975 DAZ3Q9NR90 486 aaKnown RBP4.49□□□□□ -1.69
SNHG1-212ENST00000539975 MRPS16Q9Y3D3 137 aaKnown RBP4.49□□□□□ -1.69
SNHG1-212ENST00000539975 TENM3Q9P273 2699 aa4.49□□□□□ -1.69
SNHG1-212ENST00000539975 LOC100131303A0A0U1RQF7 123 aa4.48□□□□□ -1.69
SNHG1-212ENST00000539975 K7EP13 123 aa4.48□□□□□ -1.69
SNHG1-212ENST00000539975 SIVA1O15304 175 aa4.48□□□□□ -1.69
SNHG1-212ENST00000539975 PKIAP61925 76 aa4.48□□□□□ -1.69
SNHG1-212ENST00000539975 ODF1Q14990 250 aa4.48□□□□□ -1.69
SNHG1-212ENST00000539975 SUMO4Q6EEV6 95 aa4.48□□□□□ -1.69
SNHG1-212ENST00000539975 MRPL54Q6P161 138 aaKnown RBP4.48□□□□□ -1.69
SNHG1-212ENST00000539975 MRAP2Q96G30 205 aa4.48□□□□□ -1.69
SNHG1-212ENST00000539975 TMEM242Q9NWH2 141 aa4.48□□□□□ -1.69
SNHG1-212ENST00000539975 CARHSP1Q9Y2V2 147 aaKnown RBP4.48□□□□□ -1.69
SNHG1-212ENST00000539975 LINC00588Q9Y4M8 146 aa4.48□□□□□ -1.69
SNHG1-212ENST00000539975 PRKDCP78527 4128 aaKnown RBP4.47□□□□□ -1.69
SNHG1-212ENST00000539975 IGLV2-18A0A075B6J9 118 aa4.47□□□□□ -1.69
SNHG1-212ENST00000539975 TRAV9-1A0A075B6T8 112 aa4.47□□□□□ -1.69
SNHG1-212ENST00000539975 A0A087WX48 190 aa4.47□□□□□ -1.69
SNHG1-212ENST00000539975 C7orf77A4D0Y5 90 aa4.47□□□□□ -1.69
SNHG1-212ENST00000539975 TMEM262E9PQX1 116 aa4.47□□□□□ -1.69
SNHG1-212ENST00000539975 M0QY20 66 aa4.47□□□□□ -1.69
SNHG1-212ENST00000539975 PPBPP02775 128 aa4.47□□□□□ -1.69
SNHG1-212ENST00000539975 CKS2P33552 79 aa4.47□□□□□ -1.69
SNHG1-212ENST00000539975 TIRAPP58753 221 aa4.47□□□□□ -1.69
SNHG1-212ENST00000539975 KRTAP15-1Q3LI76 137 aa4.47□□□□□ -1.69
SNHG1-212ENST00000539975 COX19Q49B96 90 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms