RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 RNASE3P12724 160 aaKnown RBP12.41□□□□□ -0.42
COPS3-212ENST00000539941 CRYBA4P53673 196 aa12.41□□□□□ -0.42
COPS3-212ENST00000539941 PHLDA3Q9Y5J5 127 aa12.41□□□□□ -0.42
COPS3-212ENST00000539941 CD7P09564 240 aa12.4□□□□□ -0.42
COPS3-212ENST00000539941 SPANXB1Q9NS25 103 aaPredicted RBP12.4□□□□□ -0.42
COPS3-212ENST00000539941 MSRB1Q9NZV6 116 aa12.4□□□□□ -0.42
COPS3-212ENST00000539941 NBEAL1Q6ZS30 2694 aa12.39□□□□□ -0.43
COPS3-212ENST00000539941 TRGV11A0A075B6L2 103 aa12.39□□□□□ -0.43
COPS3-212ENST00000539941 TRAV26-1A0A087WT03 109 aa12.39□□□□□ -0.43
COPS3-212ENST00000539941 C19orf73Q9NVV2 129 aa12.39□□□□□ -0.43
COPS3-212ENST00000539941 IGHV3-16A0A0C4DH30 117 aa12.38□□□□□ -0.43
COPS3-212ENST00000539941 NXPH4O95158 308 aa12.38□□□□□ -0.43
COPS3-212ENST00000539941 INSP01308 110 aa12.38□□□□□ -0.43
COPS3-212ENST00000539941 FXYD7P58549 80 aa12.38□□□□□ -0.43
COPS3-212ENST00000539941 AMN1Q8IY45 258 aa12.38□□□□□ -0.43
COPS3-212ENST00000539941 WFDC9Q8NEX5 89 aa12.38□□□□□ -0.43
COPS3-212ENST00000539941 LINC00467Q9BRT7 94 aa12.38□□□□□ -0.43
COPS3-212ENST00000539941 VCX2Q9H322 139 aa12.38□□□□□ -0.43
COPS3-212ENST00000539941 GEMIN7Q9H840 131 aaKnown RBP12.38□□□□□ -0.43
COPS3-212ENST00000539941 U3KQK5 164 aa12.38□□□□□ -0.43
COPS3-212ENST00000539941 C9orf85Q96MD7 179 aa12.38□□□□□ -0.43
COPS3-212ENST00000539941 PRR31Q5SQ13 230 aa12.37□□□□□ -0.43
COPS3-212ENST00000539941 Q8N1Y9 231 aa12.37□□□□□ -0.43
COPS3-212ENST00000539941 TIMM8BQ9Y5J9 83 aaPredicted RBP12.37□□□□□ -0.43
COPS3-212ENST00000539941 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.36□□□□□ -0.43
COPS3-212ENST00000539941 TSPAN13O95857 204 aa12.36□□□□□ -0.43
COPS3-212ENST00000539941 RBMY1A1P0DJD3 496 aaKnown RBP12.36□□□□□ -0.43
COPS3-212ENST00000539941 RBMY1CP0DJD4 496 aa12.36□□□□□ -0.43
COPS3-212ENST00000539941 RBMY1FQ15415 496 aaKnown RBP12.36□□□□□ -0.43
COPS3-212ENST00000539941 MRPL51Q4U2R6 128 aaKnown RBP12.36□□□□□ -0.43
COPS3-212ENST00000539941 ORMDL3Q8N138 153 aa12.36□□□□□ -0.43
COPS3-212ENST00000539941 ATP6V0E2Q8NHE4 81 aa12.36□□□□□ -0.43
COPS3-212ENST00000539941 RAB37Q96AX2 223 aa12.36□□□□□ -0.43
COPS3-212ENST00000539941 M0R381 172 aa12.35□□□□□ -0.43
COPS3-212ENST00000539941 RNF185Q96GF1 192 aa12.35□□□□□ -0.43
COPS3-212ENST00000539941 CYSLTR1Q9Y271 337 aa12.35□□□□□ -0.43
COPS3-212ENST00000539941 D6R8Y8 96 aa12.35□□□□□ -0.43
COPS3-212ENST00000539941 EVI2AP22794 236 aa12.35□□□□□ -0.43
COPS3-212ENST00000539941 TAL2Q16559 108 aa12.35□□□□□ -0.43
COPS3-212ENST00000539941 GTSCR1Q86UQ5 136 aa12.35□□□□□ -0.43
COPS3-212ENST00000539941 PRSS3P2Q8NHM4 247 aa12.35□□□□□ -0.43
COPS3-212ENST00000539941 H0Y8G0 127 aa12.34□□□□□ -0.43
COPS3-212ENST00000539941 CKS2P33552 79 aa12.34□□□□□ -0.43
COPS3-212ENST00000539941 SHISA2Q6UWI4 295 aa12.34□□□□□ -0.43
COPS3-212ENST00000539941 PRELID3AQ96N28 172 aa12.34□□□□□ -0.43
COPS3-212ENST00000539941 E9PLD3 99 aa12.33□□□□□ -0.44
COPS3-212ENST00000539941 WIPF1O43516 503 aa12.33□□□□□ -0.44
COPS3-212ENST00000539941 MORN3Q6PF18 240 aaPredicted RBP12.33□□□□□ -0.44
COPS3-212ENST00000539941 C3orf56Q8N813 242 aa12.33□□□□□ -0.44
COPS3-212ENST00000539941 SYT8Q8NBV8 401 aa12.33□□□□□ -0.44
COPS3-212ENST00000539941 MDFICQ9P1T7 246 aa12.33□□□□□ -0.44
COPS3-212ENST00000539941 LINC01587Q99440 93 aa12.32□□□□□ -0.44
COPS3-212ENST00000539941 TM2D2Q9BX73 214 aa12.32□□□□□ -0.44
COPS3-212ENST00000539941 C1QTNF4Q9BXJ3 329 aa12.32□□□□□ -0.44
COPS3-212ENST00000539941 DPH3P1Q9H4G8 78 aa12.32□□□□□ -0.44
COPS3-212ENST00000539941 SPANXA1Q9NS26 97 aa12.32□□□□□ -0.44
COPS3-212ENST00000539941 XCL2Q9UBD3 114 aa12.32□□□□□ -0.44
COPS3-212ENST00000539941 WFDC10AQ9H1F0 79 aa12.31□□□□□ -0.44
COPS3-212ENST00000539941 MUC4Q99102 2169 aa12.31□□□□□ -0.44
COPS3-212ENST00000539941 TRRAPQ9Y4A5 3859 aa12.3□□□□□ -0.44
COPS3-212ENST00000539941 ZNF415Q09FC8 603 aa12.3□□□□□ -0.44
COPS3-212ENST00000539941 SPRY2O43597 315 aa12.29□□□□□ -0.44
COPS3-212ENST00000539941 HBDP02042 147 aa12.29□□□□□ -0.44
COPS3-212ENST00000539941 GAGE13Q4V321 117 aa12.29□□□□□ -0.44
COPS3-212ENST00000539941 PIK3CD-AS1Q5SR53 167 aa12.29□□□□□ -0.44
COPS3-212ENST00000539941 PHLDA1Q8WV24 401 aaPredicted RBP12.29□□□□□ -0.44
COPS3-212ENST00000539941 PTH2Q96A98 100 aa12.29□□□□□ -0.44
COPS3-212ENST00000539941 NAA38Q9BRA0 125 aaKnown RBP12.29□□□□□ -0.44
COPS3-212ENST00000539941 GCSHP23434 173 aa12.29□□□□□ -0.44
COPS3-212ENST00000539941 C1orf158Q8N1D5 194 aa12.29□□□□□ -0.44
COPS3-212ENST00000539941 C14orf178Q8N769 122 aaPredicted RBP12.29□□□□□ -0.44
COPS3-212ENST00000539941 POM121L12Q8N7R1 296 aa12.29□□□□□ -0.44
COPS3-212ENST00000539941 NCR2O95944 276 aa12.28□□□□□ -0.44
COPS3-212ENST00000539941 GIG44P09565 113 aaPredicted RBP12.28□□□□□ -0.44
COPS3-212ENST00000539941 SPXQ9BT56 116 aa12.28□□□□□ -0.44
COPS3-212ENST00000539941 ERG28Q9UKR5 140 aa12.28□□□□□ -0.44
COPS3-212ENST00000539941 KIF25-AS1Q9Y6Z4 181 aa12.28□□□□□ -0.44
COPS3-212ENST00000539941 PKD1L1Q8TDX9 2849 aa12.27□□□□□ -0.44
COPS3-212ENST00000539941 SMKR1H3BMG3 65 aa12.27□□□□□ -0.45
COPS3-212ENST00000539941 NPYP01303 97 aa12.27□□□□□ -0.45
COPS3-212ENST00000539941 HTN1P15515 57 aa12.27□□□□□ -0.45
COPS3-212ENST00000539941 RPL35AP18077 110 aaKnown RBP12.27□□□□□ -0.45
COPS3-212ENST00000539941 CEND1Q8N111 149 aa12.27□□□□□ -0.45
COPS3-212ENST00000539941 IFI27L1Q96BM0 104 aa12.27□□□□□ -0.45
COPS3-212ENST00000539941 ZNF479Q96JC4 524 aa12.27□□□□□ -0.45
COPS3-212ENST00000539941 IGLL5B9A064 214 aa12.26□□□□□ -0.45
COPS3-212ENST00000539941 TNFRSF6BO95407 300 aa12.26□□□□□ -0.45
COPS3-212ENST00000539941 NMUP48645 174 aa12.26□□□□□ -0.45
COPS3-212ENST00000539941 WFDC2Q14508 124 aa12.26□□□□□ -0.45
COPS3-212ENST00000539941 C11orf72Q8NBR9 251 aa12.26□□□□□ -0.45
COPS3-212ENST00000539941 CHAC1Q9BUX1 264 aa12.26□□□□□ -0.45
COPS3-212ENST00000539941 MAP1LC3AQ9H492 121 aa12.26□□□□□ -0.45
COPS3-212ENST00000539941 M0R2P5 195 aa12.26□□□□□ -0.45
COPS3-212ENST00000539941 ZNF876PQ49A33 203 aa12.26□□□□□ -0.45
COPS3-212ENST00000539941 PPP1R17O96001 155 aa12.25□□□□□ -0.45
COPS3-212ENST00000539941 LINC00315P59091 139 aa12.25□□□□□ -0.45
COPS3-212ENST00000539941 NRACQ8N912 160 aa12.25□□□□□ -0.45
COPS3-212ENST00000539941 MGPP08493 103 aa12.24□□□□□ -0.45
COPS3-212ENST00000539941 FXYD2P54710 66 aa12.24□□□□□ -0.45
COPS3-212ENST00000539941 GAGE5Q13069 117 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms