RNA–Protein interactions for RNA: ENST00000539687.5

SPARC-209, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 511 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-209ENST00000539687 SIVA1O15304 175 aa7.44□□□□□ -1.22
SPARC-209ENST00000539687 RBMY1A1P0DJD3 496 aaKnown RBP7.44□□□□□ -1.22
SPARC-209ENST00000539687 RBMY1CP0DJD4 496 aa7.44□□□□□ -1.22
SPARC-209ENST00000539687 ODF1Q14990 250 aa7.44□□□□□ -1.22
SPARC-209ENST00000539687 RBMY1FQ15415 496 aaKnown RBP7.44□□□□□ -1.22
SPARC-209ENST00000539687 COL5A1-AS1Q5SY13 56 aa7.44□□□□□ -1.22
SPARC-209ENST00000539687 C2orf66Q6UXQ4 117 aa7.44□□□□□ -1.22
SPARC-209ENST00000539687 ZFP2Q6ZN57 461 aa7.44□□□□□ -1.22
SPARC-209ENST00000539687 PRIMA1Q86XR5 153 aa7.44□□□□□ -1.22
SPARC-209ENST00000539687 SPATA3Q8NHX4 192 aa7.44□□□□□ -1.22
SPARC-209ENST00000539687 TIMM17AQ99595 171 aa7.44□□□□□ -1.22
SPARC-209ENST00000539687 MCRIP2Q9BUT9 160 aaKnown RBP7.44□□□□□ -1.22
SPARC-209ENST00000539687 SNHG12Q9BXW3 62 aa7.44□□□□□ -1.22
SPARC-209ENST00000539687 F8VRH5 84 aa7.43□□□□□ -1.22
SPARC-209ENST00000539687 NPSP0C0P6 89 aa7.43□□□□□ -1.22
SPARC-209ENST00000539687 MAJINQ3KP22 176 aa7.43□□□□□ -1.22
SPARC-209ENST00000539687 C9orf66Q5T8R8 295 aa7.43□□□□□ -1.22
SPARC-209ENST00000539687 C12orf54Q6X4T0 127 aa7.43□□□□□ -1.22
SPARC-209ENST00000539687 LINC00482Q8N8I6 264 aa7.43□□□□□ -1.22
SPARC-209ENST00000539687 C11orf72Q8NBR9 251 aa7.43□□□□□ -1.22
SPARC-209ENST00000539687 TMEM263Q8WUH6 116 aaKnown RBP7.43□□□□□ -1.22
SPARC-209ENST00000539687 RS1O15537 224 aa7.42□□□□□ -1.22
SPARC-209ENST00000539687 SPRY2O43597 315 aa7.42□□□□□ -1.22
SPARC-209ENST00000539687 HTN1P15515 57 aa7.42□□□□□ -1.22
SPARC-209ENST00000539687 ZNF124Q15973 351 aa7.42□□□□□ -1.22
SPARC-209ENST00000539687 GTSCR1Q86UQ5 136 aa7.42□□□□□ -1.22
SPARC-209ENST00000539687 C16orf74Q96GX8 76 aa7.42□□□□□ -1.22
SPARC-209ENST00000539687 XCL2Q9UBD3 114 aa7.42□□□□□ -1.22
SPARC-209ENST00000539687 TNFRSF18Q9Y5U5 241 aa7.42□□□□□ -1.22
SPARC-209ENST00000539687 EREGO14944 169 aa7.41□□□□□ -1.22
SPARC-209ENST00000539687 TMEM97Q5BJF2 176 aa7.41□□□□□ -1.22
SPARC-209ENST00000539687 NEXN-AS1Q8NBZ9 246 aa7.41□□□□□ -1.22
SPARC-209ENST00000539687 JPT2Q9H910 190 aa7.41□□□□□ -1.22
SPARC-209ENST00000539687 CHTOPQ9Y3Y2 248 aaKnown RBP7.41□□□□□ -1.22
SPARC-209ENST00000539687 SVEP1Q4LDE5 3571 aa7.4□□□□□ -1.22
SPARC-209ENST00000539687 IGHV3-53P01767 116 aa7.4□□□□□ -1.22
SPARC-209ENST00000539687 CRYBA4P53673 196 aa7.4□□□□□ -1.22
SPARC-209ENST00000539687 SMAGPQ0VAQ4 97 aa7.4□□□□□ -1.22
SPARC-209ENST00000539687 DAZ2Q13117 558 aaKnown RBP7.4□□□□□ -1.22
SPARC-209ENST00000539687 PMVKQ15126 192 aa7.4□□□□□ -1.22
SPARC-209ENST00000539687 BOD1L2Q8IYS8 172 aa7.4□□□□□ -1.22
SPARC-209ENST00000539687 C1orf158Q8N1D5 194 aa7.4□□□□□ -1.22
SPARC-209ENST00000539687 IL17DQ8TAD2 202 aa7.4□□□□□ -1.22
SPARC-209ENST00000539687 RNASE8Q8TDE3 154 aaKnown RBP7.4□□□□□ -1.22
SPARC-209ENST00000539687 DKK2Q9UBU2 259 aa7.4□□□□□ -1.22
SPARC-209ENST00000539687 TP53TG1Q9Y2A0 90 aa7.4□□□□□ -1.22
SPARC-209ENST00000539687 ACANP16112 2415 aa7.39□□□□□ -1.23
SPARC-209ENST00000539687 TRBV10-1A0A0K0K1A3 114 aa7.39□□□□□ -1.23
SPARC-209ENST00000539687 HERVK_113P61574 105 aa7.39□□□□□ -1.23
SPARC-209ENST00000539687 CFAP126Q5VTH2 177 aa7.39□□□□□ -1.23
SPARC-209ENST00000539687 UFSP1Q6NVU6 142 aa7.39□□□□□ -1.23
SPARC-209ENST00000539687 BAALCQ8WXS3 180 aa7.39□□□□□ -1.23
SPARC-209ENST00000539687 C19orf73Q9NVV2 129 aa7.39□□□□□ -1.23
SPARC-209ENST00000539687 MRPL35Q9NZE8 188 aaKnown RBP7.39□□□□□ -1.23
SPARC-209ENST00000539687 MAP1AP78559 2803 aaPredicted RBP7.39□□□□□ -1.23
SPARC-209ENST00000539687 TRAV4A0A0B4J268 109 aa7.38□□□□□ -1.23
SPARC-209ENST00000539687 IGIPA6NJ69 53 aa7.38□□□□□ -1.23
SPARC-209ENST00000539687 AZU1P20160 251 aa7.38□□□□□ -1.23
SPARC-209ENST00000539687 BATFQ16520 125 aa7.38□□□□□ -1.23
SPARC-209ENST00000539687 RRN3P1Q2M238 152 aa7.38□□□□□ -1.23
SPARC-209ENST00000539687 ANKRD39Q53RE8 183 aa7.38□□□□□ -1.23
SPARC-209ENST00000539687 ZC2HC1BQ5TFG8 222 aa7.38□□□□□ -1.23
SPARC-209ENST00000539687 C20orf203Q8NBC4 194 aa7.38□□□□□ -1.23
SPARC-209ENST00000539687 OR4C5Q8NGB2 326 aa7.38□□□□□ -1.23
SPARC-209ENST00000539687 HHLA3Q9XRX5 114 aa7.38□□□□□ -1.23
SPARC-209ENST00000539687 MUC4Q99102 2169 aa7.37□□□□□ -1.23
SPARC-209ENST00000539687 SMIM9A6NGZ8 99 aa7.37□□□□□ -1.23
SPARC-209ENST00000539687 NMUP48645 174 aa7.37□□□□□ -1.23
SPARC-209ENST00000539687 KRTAP10-3P60369 221 aa7.37□□□□□ -1.23
SPARC-209ENST00000539687 HIST2H2BDQ6DRA6 164 aa7.37□□□□□ -1.23
SPARC-209ENST00000539687 STPG4Q8N801 248 aa7.37□□□□□ -1.23
SPARC-209ENST00000539687 CITED1Q99966 193 aa7.37□□□□□ -1.23
SPARC-209ENST00000539687 MRPL16Q9NX20 251 aaKnown RBP7.37□□□□□ -1.23
SPARC-209ENST00000539687 HIGD1BQ9P298 99 aa7.37□□□□□ -1.23
SPARC-209ENST00000539687 PYGO1Q9Y3Y4 419 aa7.37□□□□□ -1.23
SPARC-209ENST00000539687 FLNAP21333 2647 aaKnown RBP7.37□□□□□ -1.23
SPARC-209ENST00000539687 ZANQ9Y493 2812 aa7.36□□□□□ -1.23
SPARC-209ENST00000539687 IGHV3OR16-12A0A075B7B8 117 aa7.36□□□□□ -1.23
SPARC-209ENST00000539687 TRGV1A0A0A0MS02 117 aa7.36□□□□□ -1.23
SPARC-209ENST00000539687 PRSS29PA6NIE9 313 aa7.36□□□□□ -1.23
SPARC-209ENST00000539687 TSHBP01222 138 aa7.36□□□□□ -1.23
SPARC-209ENST00000539687 FGF6P10767 208 aa7.36□□□□□ -1.23
SPARC-209ENST00000539687 SEC11AP67812 179 aa7.36□□□□□ -1.23
SPARC-209ENST00000539687 RPL36AP83881 106 aaKnown RBP7.36□□□□□ -1.23
SPARC-209ENST00000539687 HSD52Q0P140 79 aa7.36□□□□□ -1.23
SPARC-209ENST00000539687 RPL36ALQ969Q0 106 aaKnown RBP7.36□□□□□ -1.23
SPARC-209ENST00000539687 OVOL2Q9BRP0 275 aa7.36□□□□□ -1.23
SPARC-209ENST00000539687 FBN1P35555 2871 aaKnown RBP7.36□□□□□ -1.23
SPARC-209ENST00000539687 HIVEP2P31629 2446 aa7.36□□□□□ -1.23
SPARC-209ENST00000539687 A0A1B0GV90 55 aa7.35□□□□□ -1.23
SPARC-209ENST00000539687 RPL35AP18077 110 aaKnown RBP7.35□□□□□ -1.23
SPARC-209ENST00000539687 COTL1Q14019 142 aa7.35□□□□□ -1.23
SPARC-209ENST00000539687 NEGR1Q7Z3B1 354 aa7.35□□□□□ -1.23
SPARC-209ENST00000539687 DAZ4Q86SG3 579 aaKnown RBP7.35□□□□□ -1.23
SPARC-209ENST00000539687 OR11H2Q8NH07 326 aa7.35□□□□□ -1.23
SPARC-209ENST00000539687 DAZ3Q9NR90 486 aaKnown RBP7.35□□□□□ -1.23
SPARC-209ENST00000539687 SPANXA1Q9NS26 97 aa7.35□□□□□ -1.23
SPARC-209ENST00000539687 NSD1Q96L73 2696 aaPredicted RBP7.34□□□□□ -1.23
SPARC-209ENST00000539687 ANK3Q12955 4377 aaKnown RBP7.34□□□□□ -1.23
SPARC-209ENST00000539687 A6NDN8 102 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms