RNA–Protein interactions for RNA: ENST00000539417.6

RPAIN-206, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-206ENST00000539417 TSKUQ8WUA8 353 aa10.71□□□□□ -0.69
RPAIN-206ENST00000539417 TNFRSF18Q9Y5U5 241 aa10.71□□□□□ -0.69
RPAIN-206ENST00000539417 SMIM17P0DL12 118 aa10.7□□□□□ -0.7
RPAIN-206ENST00000539417 UBE2D3P61077 147 aa10.7□□□□□ -0.7
RPAIN-206ENST00000539417 UBE2D2P62837 147 aa10.7□□□□□ -0.7
RPAIN-206ENST00000539417 RHEBQ15382 184 aa10.7□□□□□ -0.7
RPAIN-206ENST00000539417 Q8N3U1 123 aa10.7□□□□□ -0.7
RPAIN-206ENST00000539417 OR10G8Q8NGN5 311 aa10.7□□□□□ -0.7
RPAIN-206ENST00000539417 SMCO4Q9NRQ5 59 aa10.7□□□□□ -0.7
RPAIN-206ENST00000539417 IGHV3-38A0A0C4DH36 116 aa10.69□□□□□ -0.7
RPAIN-206ENST00000539417 TRBV10-1A0A0K0K1A3 114 aa10.69□□□□□ -0.7
RPAIN-206ENST00000539417 HIGD1CA8MV81 97 aa10.69□□□□□ -0.7
RPAIN-206ENST00000539417 M0QY20 66 aa10.69□□□□□ -0.7
RPAIN-206ENST00000539417 LELP1Q5T871 98 aa10.69□□□□□ -0.7
RPAIN-206ENST00000539417 C1orf134Q5TEV5 83 aa10.69□□□□□ -0.7
RPAIN-206ENST00000539417 C15orf54Q8N8G6 183 aa10.69□□□□□ -0.7
RPAIN-206ENST00000539417 TRBV7-3A0A075B6L6 115 aa10.68□□□□□ -0.7
RPAIN-206ENST00000539417 TRGC1P0CF51 173 aa10.68□□□□□ -0.7
RPAIN-206ENST00000539417 DPH3P1Q9H4G8 78 aa10.68□□□□□ -0.7
RPAIN-206ENST00000539417 TRAV26-2A0A0B4J265 109 aa10.68□□□□□ -0.7
RPAIN-206ENST00000539417 RPL36AP83881 106 aaKnown RBP10.68□□□□□ -0.7
RPAIN-206ENST00000539417 OR10J3Q5JRS4 329 aa10.68□□□□□ -0.7
RPAIN-206ENST00000539417 C6orf223Q8N319 242 aa10.68□□□□□ -0.7
RPAIN-206ENST00000539417 NUP35Q8NFH5 326 aa10.68□□□□□ -0.7
RPAIN-206ENST00000539417 RPL36ALQ969Q0 106 aaKnown RBP10.68□□□□□ -0.7
RPAIN-206ENST00000539417 GFRA4Q9GZZ7 299 aa10.68□□□□□ -0.7
RPAIN-206ENST00000539417 RPS10P5Q9NQ39 176 aa10.68□□□□□ -0.7
RPAIN-206ENST00000539417 DYNC1H1Q14204 4646 aaKnown RBP10.67□□□□□ -0.7
RPAIN-206ENST00000539417 PKHD1P08F94 4074 aa10.67□□□□□ -0.7
RPAIN-206ENST00000539417 C7orf77A4D0Y5 90 aa10.67□□□□□ -0.7
RPAIN-206ENST00000539417 DNAH10OSP0CZ25 163 aa10.67□□□□□ -0.7
RPAIN-206ENST00000539417 CBLN2Q8IUK8 224 aa10.67□□□□□ -0.7
RPAIN-206ENST00000539417 GAS8-AS1O95177 125 aa10.66□□□□□ -0.7
RPAIN-206ENST00000539417 IGHV3-30P01768 117 aa10.66□□□□□ -0.7
RPAIN-206ENST00000539417 IGHV3-33P01772 117 aa10.66□□□□□ -0.7
RPAIN-206ENST00000539417 IGHV3-30-3P0DP02 117 aa10.66□□□□□ -0.7
RPAIN-206ENST00000539417 IGHV3-30-5P0DP03 117 aa10.66□□□□□ -0.7
RPAIN-206ENST00000539417 TTC32Q5I0X7 151 aa10.66□□□□□ -0.7
RPAIN-206ENST00000539417 GATD1Q8NB37 220 aa10.66□□□□□ -0.7
RPAIN-206ENST00000539417 SMIM27A0A1W2PRY6 76 aa10.65□□□□□ -0.7
RPAIN-206ENST00000539417 FAM231BA6NCW3 169 aa10.65□□□□□ -0.7
RPAIN-206ENST00000539417 PRSS29PA6NIE9 313 aa10.65□□□□□ -0.7
RPAIN-206ENST00000539417 TNP2Q05952 138 aa10.65□□□□□ -0.7
RPAIN-206ENST00000539417 PNRC1Q12796 327 aaPredicted RBP10.65□□□□□ -0.7
RPAIN-206ENST00000539417 DEFB104AQ8WTQ1 72 aa10.65□□□□□ -0.7
RPAIN-206ENST00000539417 TRAV8-6A0A0B4J262 113 aa10.64□□□□□ -0.71
RPAIN-206ENST00000539417 A0A1B0GUT8 65 aa10.64□□□□□ -0.71
RPAIN-206ENST00000539417 A0A1B0GVY2 172 aa10.64□□□□□ -0.71
RPAIN-206ENST00000539417 NTM-AS1Q6ZSK4 140 aa10.64□□□□□ -0.71
RPAIN-206ENST00000539417 A0A087WWC5 75 aa10.63□□□□□ -0.71
RPAIN-206ENST00000539417 LINC01556Q5JQF7 62 aa10.63□□□□□ -0.71
RPAIN-206ENST00000539417 RASL11AQ6T310 242 aa10.63□□□□□ -0.71
RPAIN-206ENST00000539417 Q6ZRN7 208 aaPredicted RBP10.63□□□□□ -0.71
RPAIN-206ENST00000539417 LINC00336Q6ZUF6 198 aa10.63□□□□□ -0.71
RPAIN-206ENST00000539417 RPL39LQ96EH5 51 aaKnown RBP10.63□□□□□ -0.71
RPAIN-206ENST00000539417 RNF185Q96GF1 192 aa10.63□□□□□ -0.71
RPAIN-206ENST00000539417 NAT8BQ9UHF3 227 aa10.62□□□□□ -0.71
RPAIN-206ENST00000539417 LOC105371267A0A1B0GV96 52 aa10.61□□□□□ -0.71
RPAIN-206ENST00000539417 BORCS7Q96B45 105 aa10.61□□□□□ -0.71
RPAIN-206ENST00000539417 COLCA2A8K830 154 aa10.61□□□□□ -0.71
RPAIN-206ENST00000539417 MT-ND4LP03901 98 aa10.61□□□□□ -0.71
RPAIN-206ENST00000539417 DAZ4Q86SG3 579 aaKnown RBP10.61□□□□□ -0.71
RPAIN-206ENST00000539417 AMN1Q8IY45 258 aa10.61□□□□□ -0.71
RPAIN-206ENST00000539417 DNAJC30Q96LL9 226 aa10.61□□□□□ -0.71
RPAIN-206ENST00000539417 NIT2Q9NQR4 276 aa10.61□□□□□ -0.71
RPAIN-206ENST00000539417 DAZ3Q9NR90 486 aaKnown RBP10.61□□□□□ -0.71
RPAIN-206ENST00000539417 TRBV6-8A0A0A6YYG3 113 aa10.6□□□□□ -0.71
RPAIN-206ENST00000539417 H7C1H1 209 aa10.6□□□□□ -0.71
RPAIN-206ENST00000539417 RAB4AP20338 218 aa10.6□□□□□ -0.71
RPAIN-206ENST00000539417 RIGQ13278 110 aa10.6□□□□□ -0.71
RPAIN-206ENST00000539417 SMIM15Q7Z3B0 74 aa10.6□□□□□ -0.71
RPAIN-206ENST00000539417 NIT1Q86X76 327 aa10.6□□□□□ -0.71
RPAIN-206ENST00000539417 TMEM191AQ9H0A3 160 aa10.6□□□□□ -0.71
RPAIN-206ENST00000539417 DNAH5Q8TE73 4624 aa10.6□□□□□ -0.71
RPAIN-206ENST00000539417 MRPL54Q6P161 138 aaKnown RBP10.59□□□□□ -0.71
RPAIN-206ENST00000539417 TRAV9-2A0A087WT02 112 aa10.58□□□□□ -0.72
RPAIN-206ENST00000539417 IBA57-AS1B1ANH7 110 aa10.58□□□□□ -0.72
RPAIN-206ENST00000539417 SMKR1H3BMG3 65 aa10.58□□□□□ -0.72
RPAIN-206ENST00000539417 RPS10P46783 165 aaKnown RBP10.58□□□□□ -0.72
RPAIN-206ENST00000539417 CAMPP49913 170 aa10.58□□□□□ -0.72
RPAIN-206ENST00000539417 TMEM242Q9NWH2 141 aa10.58□□□□□ -0.72
RPAIN-206ENST00000539417 A0A1B0GXF2 115 aa10.57□□□□□ -0.72
RPAIN-206ENST00000539417 NCR2O95944 276 aa10.57□□□□□ -0.72
RPAIN-206ENST00000539417 CTDSP1Q9GZU7 261 aa10.57□□□□□ -0.72
RPAIN-206ENST00000539417 Q9HAA7 133 aa10.56□□□□□ -0.72
RPAIN-206ENST00000539417 PPP1R2P9O14990 202 aa10.55□□□□□ -0.72
RPAIN-206ENST00000539417 MPV17L2Q567V2 206 aa10.55□□□□□ -0.72
RPAIN-206ENST00000539417 C10orf126Q8N4M7 172 aa10.55□□□□□ -0.72
RPAIN-206ENST00000539417 C1orf196B1AJZ1 125 aa10.55□□□□□ -0.72
RPAIN-206ENST00000539417 K7EP13 123 aa10.55□□□□□ -0.72
RPAIN-206ENST00000539417 BTF3P20290 206 aaKnown RBP10.55□□□□□ -0.72
RPAIN-206ENST00000539417 RAB5AP20339 215 aa10.55□□□□□ -0.72
RPAIN-206ENST00000539417 RAB5BP61020 215 aa10.55□□□□□ -0.72
RPAIN-206ENST00000539417 GAGE6Q13070 117 aa10.55□□□□□ -0.72
RPAIN-206ENST00000539417 MRPL51Q4U2R6 128 aaKnown RBP10.55□□□□□ -0.72
RPAIN-206ENST00000539417 ANAPC16Q96DE5 110 aa10.55□□□□□ -0.72
RPAIN-206ENST00000539417 CHCHD5Q9BSY4 110 aa10.55□□□□□ -0.72
RPAIN-206ENST00000539417 TMEM262E9PQX1 116 aa10.54□□□□□ -0.72
RPAIN-206ENST00000539417 IQCJQ1A5X6 159 aa10.54□□□□□ -0.72
RPAIN-206ENST00000539417 FAM104BQ5XKR9 115 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 107.7 ms