RNA–Protein interactions for RNA: ENST00000538725.1

MSRB3-208, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 4

Gene MSRB3, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-208ENST00000538725 Q6ZSA8 131 aa13.33□□□□□ -0.28
MSRB3-208ENST00000538725 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.33□□□□□ -0.28
MSRB3-208ENST00000538725 GNG13Q9P2W3 67 aa13.33□□□□□ -0.28
MSRB3-208ENST00000538725 TRAV1-1A0A0B4J248 108 aa13.32□□□□□ -0.28
MSRB3-208ENST00000538725 F5H697 171 aa13.32□□□□□ -0.28
MSRB3-208ENST00000538725 RAB5CP51148 216 aa13.32□□□□□ -0.28
MSRB3-208ENST00000538725 SSTP61278 116 aa13.32□□□□□ -0.28
MSRB3-208ENST00000538725 ATRAIDQ6UW56 229 aa13.32□□□□□ -0.28
MSRB3-208ENST00000538725 C11orf52Q96A22 123 aa13.32□□□□□ -0.28
MSRB3-208ENST00000538725 RBFOX3A6NFN3 312 aa13.31□□□□□ -0.28
MSRB3-208ENST00000538725 DERL1Q9BUN8 251 aa13.31□□□□□ -0.28
MSRB3-208ENST00000538725 TEX46H3BTG2 121 aa13.3□□□□□ -0.28
MSRB3-208ENST00000538725 SMIM17P0DL12 118 aa13.3□□□□□ -0.28
MSRB3-208ENST00000538725 EIF5AL1Q6IS14 154 aaKnown RBP13.3□□□□□ -0.28
MSRB3-208ENST00000538725 KIF25-AS1Q9Y6Z4 181 aa13.3□□□□□ -0.28
MSRB3-208ENST00000538725 HERC1Q15751 4861 aa13.29□□□□□ -0.28
MSRB3-208ENST00000538725 DAZAP1Q96EP5 407 aaKnown RBP13.29□□□□□ -0.28
MSRB3-208ENST00000538725 TMEM97Q5BJF2 176 aa13.28□□□□□ -0.28
MSRB3-208ENST00000538725 CENPWQ5EE01 88 aa13.28□□□□□ -0.28
MSRB3-208ENST00000538725 ENHOQ6UWT2 76 aa13.28□□□□□ -0.28
MSRB3-208ENST00000538725 AP1S3Q96PC3 154 aa13.28□□□□□ -0.28
MSRB3-208ENST00000538725 C1orf43Q9BWL3 253 aa13.28□□□□□ -0.28
MSRB3-208ENST00000538725 VAX2Q9UIW0 290 aa13.28□□□□□ -0.28
MSRB3-208ENST00000538725 IGLV2-8P01709 118 aa13.27□□□□□ -0.29
MSRB3-208ENST00000538725 PKIAP61925 76 aa13.27□□□□□ -0.29
MSRB3-208ENST00000538725 LINC01620Q4KN68 170 aa13.27□□□□□ -0.29
MSRB3-208ENST00000538725 MPV17L2Q567V2 206 aa13.27□□□□□ -0.29
MSRB3-208ENST00000538725 C15orf54Q8N8G6 183 aa13.27□□□□□ -0.29
MSRB3-208ENST00000538725 CHCHD5Q9BSY4 110 aa13.27□□□□□ -0.29
MSRB3-208ENST00000538725 MYCBP2O75592 4640 aa13.27□□□□□ -0.29
MSRB3-208ENST00000538725 DMBT1Q9UGM3 2413 aaPredicted RBP13.27□□□□□ -0.29
MSRB3-208ENST00000538725 CRPP02741 224 aa13.26□□□□□ -0.29
MSRB3-208ENST00000538725 ANGP03950 147 aaKnown RBP13.26□□□□□ -0.29
MSRB3-208ENST00000538725 GZMBP10144 247 aa13.26□□□□□ -0.29
MSRB3-208ENST00000538725 SULT1A2P50226 295 aa13.26□□□□□ -0.29
MSRB3-208ENST00000538725 RPS20P60866 119 aaKnown RBP13.26□□□□□ -0.29
MSRB3-208ENST00000538725 NTM-AS1Q6ZSK4 140 aa13.26□□□□□ -0.29
MSRB3-208ENST00000538725 SMIM12Q96EX1 92 aa13.26□□□□□ -0.29
MSRB3-208ENST00000538725 FLG2Q5D862 2391 aaPredicted RBP13.25□□□□□ -0.29
MSRB3-208ENST00000538725 RAB19A4D1S5 217 aa13.25□□□□□ -0.29
MSRB3-208ENST00000538725 C19orf71A6NCJ1 209 aa13.25□□□□□ -0.29
MSRB3-208ENST00000538725 PDE6DO43924 150 aa13.25□□□□□ -0.29
MSRB3-208ENST00000538725 PLA2G1BP04054 148 aaKnown RBP13.25□□□□□ -0.29
MSRB3-208ENST00000538725 IGLC6P0CF74 106 aa13.25□□□□□ -0.29
MSRB3-208ENST00000538725 GNG4P50150 75 aa13.25□□□□□ -0.29
MSRB3-208ENST00000538725 FER1L6-AS1Q8NA97 138 aa13.25□□□□□ -0.29
MSRB3-208ENST00000538725 OR2D3Q8NGH3 330 aa13.25□□□□□ -0.29
MSRB3-208ENST00000538725 TPPP3Q9BW30 176 aa13.25□□□□□ -0.29
MSRB3-208ENST00000538725 MEF2BQ02080 365 aaPredicted RBP13.24□□□□□ -0.29
MSRB3-208ENST00000538725 C14orf177Q52M58 125 aa13.24□□□□□ -0.29
MSRB3-208ENST00000538725 CACNG7P62955 275 aa13.23□□□□□ -0.29
MSRB3-208ENST00000538725 TRBV25-1A0A075B6N4 114 aa13.22□□□□□ -0.29
MSRB3-208ENST00000538725 XKRY2A2RUG3 117 aa13.22□□□□□ -0.29
MSRB3-208ENST00000538725 F2Z2F3 143 aa13.22□□□□□ -0.29
MSRB3-208ENST00000538725 H7C1H1 209 aa13.22□□□□□ -0.29
MSRB3-208ENST00000538725 M0QY20 66 aa13.22□□□□□ -0.29
MSRB3-208ENST00000538725 IFNA1P01562 189 aa13.22□□□□□ -0.29
MSRB3-208ENST00000538725 MIAQ16674 131 aa13.22□□□□□ -0.29
MSRB3-208ENST00000538725 BIN3Q9NQY0 253 aa13.22□□□□□ -0.29
MSRB3-208ENST00000538725 MED9Q9NWA0 146 aa13.22□□□□□ -0.29
MSRB3-208ENST00000538725 P01737 135 aa13.21□□□□□ -0.29
MSRB3-208ENST00000538725 MGPP08493 103 aa13.21□□□□□ -0.29
MSRB3-208ENST00000538725 SCXQ7RTU7 201 aa13.21□□□□□ -0.29
MSRB3-208ENST00000538725 TCTE3Q8IZS6 198 aa13.21□□□□□ -0.29
MSRB3-208ENST00000538725 CHAC1Q9BUX1 264 aa13.21□□□□□ -0.29
MSRB3-208ENST00000538725 RBX1P62877 108 aa13.2□□□□□ -0.3
MSRB3-208ENST00000538725 GAGE6Q13070 117 aa13.2□□□□□ -0.3
MSRB3-208ENST00000538725 IQCJQ1A5X6 159 aa13.2□□□□□ -0.3
MSRB3-208ENST00000538725 SLC51BQ86UW2 128 aa13.2□□□□□ -0.3
MSRB3-208ENST00000538725 PRR34Q9NV39 138 aa13.2□□□□□ -0.3
MSRB3-208ENST00000538725 TRBV20OR9-2A0A075B6H5 130 aa13.19□□□□□ -0.3
MSRB3-208ENST00000538725 SUMO4Q6EEV6 95 aa13.19□□□□□ -0.3
MSRB3-208ENST00000538725 IGHV1-24A0A0C4DH33 117 aa13.18□□□□□ -0.3
MSRB3-208ENST00000538725 BCL2P10415 239 aa13.18□□□□□ -0.3
MSRB3-208ENST00000538725 LYZL1Q6UWQ5 148 aa13.18□□□□□ -0.3
MSRB3-208ENST00000538725 LINC00269Q8N2A0 174 aa13.18□□□□□ -0.3
MSRB3-208ENST00000538725 C9orf62Q8N4C0 152 aa13.18□□□□□ -0.3
MSRB3-208ENST00000538725 USP17L23D6RBM5 183 aa13.17□□□□□ -0.3
MSRB3-208ENST00000538725 HLA-DQA1P01909 254 aa13.17□□□□□ -0.3
MSRB3-208ENST00000538725 TRGC1P0CF51 173 aa13.17□□□□□ -0.3
MSRB3-208ENST00000538725 NTF3P20783 257 aa13.17□□□□□ -0.3
MSRB3-208ENST00000538725 TAGLN2P37802 199 aaKnown RBP13.17□□□□□ -0.3
MSRB3-208ENST00000538725 WDR73Q6P4I2 378 aa13.17□□□□□ -0.3
MSRB3-208ENST00000538725 RASL11AQ6T310 242 aa13.17□□□□□ -0.3
MSRB3-208ENST00000538725 CIRBP-AS1Q8TBR5 109 aa13.17□□□□□ -0.3
MSRB3-208ENST00000538725 NKX2-5P52952 324 aaPredicted RBP13.16□□□□□ -0.3
MSRB3-208ENST00000538725 NUDT10Q8NFP7 164 aa13.16□□□□□ -0.3
MSRB3-208ENST00000538725 DEFB104AQ8WTQ1 72 aa13.16□□□□□ -0.3
MSRB3-208ENST00000538725 NUDT11Q96G61 164 aa13.16□□□□□ -0.3
MSRB3-208ENST00000538725 DPH3P1Q9H4G8 78 aa13.16□□□□□ -0.3
MSRB3-208ENST00000538725 DGAT2L7PQ6IED9 249 aa13.15□□□□□ -0.3
MSRB3-208ENST00000538725 KRTAP26-1Q6PEX3 210 aa13.15□□□□□ -0.3
MSRB3-208ENST00000538725 CLPSL2Q6UWE3 100 aa13.15□□□□□ -0.3
MSRB3-208ENST00000538725 NIT2Q9NQR4 276 aa13.15□□□□□ -0.3
MSRB3-208ENST00000538725 PRSS1P07477 247 aa13.14□□□□□ -0.31
MSRB3-208ENST00000538725 A0A1B0GUV1 79 aa13.13□□□□□ -0.31
MSRB3-208ENST00000538725 REG3AQ06141 175 aa13.13□□□□□ -0.31
MSRB3-208ENST00000538725 TMEM243Q9BU79 118 aa13.13□□□□□ -0.31
MSRB3-208ENST00000538725 CTRLP40313 264 aa13.12□□□□□ -0.31
MSRB3-208ENST00000538725 TWIST1Q15672 202 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 142.8 ms