RNA–Protein interactions for RNA: ENST00000538026.5

SPARC-208, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-208ENST00000538026 K7EP13 123 aa5.6□□□□□ -1.51
SPARC-208ENST00000538026 NDUFS6O75380 124 aaKnown RBP5.6□□□□□ -1.51
SPARC-208ENST00000538026 NTF3P20783 257 aa5.6□□□□□ -1.51
SPARC-208ENST00000538026 RPS20P60866 119 aaKnown RBP5.6□□□□□ -1.51
SPARC-208ENST00000538026 WFDC2Q14508 124 aa5.6□□□□□ -1.51
SPARC-208ENST00000538026 NIT1Q86X76 327 aa5.6□□□□□ -1.51
SPARC-208ENST00000538026 TPPP3Q9BW30 176 aa5.6□□□□□ -1.51
SPARC-208ENST00000538026 RPP21Q9H633 154 aaKnown RBP5.6□□□□□ -1.51
SPARC-208ENST00000538026 TRAV9-2A0A087WT02 112 aa5.59□□□□□ -1.51
SPARC-208ENST00000538026 ZNF56Q15929 161 aa5.59□□□□□ -1.51
SPARC-208ENST00000538026 SUMO4Q6EEV6 95 aa5.59□□□□□ -1.51
SPARC-208ENST00000538026 WDR73Q6P4I2 378 aa5.59□□□□□ -1.51
SPARC-208ENST00000538026 FAM231DQ6ZW35 169 aa5.59□□□□□ -1.51
SPARC-208ENST00000538026 LINC01551Q86U37 167 aa5.59□□□□□ -1.51
SPARC-208ENST00000538026 EIF5A2Q9GZV4 153 aaKnown RBP5.59□□□□□ -1.51
SPARC-208ENST00000538026 TRBV6-8A0A0A6YYG3 113 aa5.58□□□□□ -1.52
SPARC-208ENST00000538026 F2Z2F3 143 aa5.58□□□□□ -1.52
SPARC-208ENST00000538026 GAS8-AS1O95177 125 aa5.58□□□□□ -1.52
SPARC-208ENST00000538026 CEBPGP53567 150 aa5.58□□□□□ -1.52
SPARC-208ENST00000538026 CACNG7P62955 275 aa5.58□□□□□ -1.52
SPARC-208ENST00000538026 RPL36AP83881 106 aaKnown RBP5.58□□□□□ -1.52
SPARC-208ENST00000538026 NFE4Q86UQ8 179 aa5.58□□□□□ -1.52
SPARC-208ENST00000538026 C10orf126Q8N4M7 172 aa5.58□□□□□ -1.52
SPARC-208ENST00000538026 RPL36ALQ969Q0 106 aaKnown RBP5.58□□□□□ -1.52
SPARC-208ENST00000538026 AP1S3Q96PC3 154 aa5.58□□□□□ -1.52
SPARC-208ENST00000538026 SMIM7Q9BQ49 75 aa5.58□□□□□ -1.52
SPARC-208ENST00000538026 Q9HAA7 133 aa5.58□□□□□ -1.52
SPARC-208ENST00000538026 A0A087WWC5 75 aa5.57□□□□□ -1.52
SPARC-208ENST00000538026 F5H697 171 aa5.57□□□□□ -1.52
SPARC-208ENST00000538026 GATCO43716 136 aaKnown RBP5.57□□□□□ -1.52
SPARC-208ENST00000538026 KRTAP10-1P60331 282 aa5.57□□□□□ -1.52
SPARC-208ENST00000538026 GATD1Q8NB37 220 aa5.57□□□□□ -1.52
SPARC-208ENST00000538026 DEFB104AQ8WTQ1 72 aa5.57□□□□□ -1.52
SPARC-208ENST00000538026 BIN3Q9NQY0 253 aa5.57□□□□□ -1.52
SPARC-208ENST00000538026 ZNF727A8MUV8 499 aa5.56□□□□□ -1.52
SPARC-208ENST00000538026 MGPP08493 103 aa5.56□□□□□ -1.52
SPARC-208ENST00000538026 RPL23P62829 140 aaKnown RBP5.56□□□□□ -1.52
SPARC-208ENST00000538026 LAGE3Q14657 143 aa5.56□□□□□ -1.52
SPARC-208ENST00000538026 MPV17L2Q567V2 206 aa5.56□□□□□ -1.52
SPARC-208ENST00000538026 ENHOQ6UWT2 76 aa5.56□□□□□ -1.52
SPARC-208ENST00000538026 PGLYRP4Q96LB8 373 aa5.56□□□□□ -1.52
SPARC-208ENST00000538026 V9GYV3 84 aa5.56□□□□□ -1.52
SPARC-208ENST00000538026 TRAV26-2A0A0B4J265 109 aa5.55□□□□□ -1.52
SPARC-208ENST00000538026 XKRY2A2RUG3 117 aa5.55□□□□□ -1.52
SPARC-208ENST00000538026 SMIM17P0DL12 118 aa5.55□□□□□ -1.52
SPARC-208ENST00000538026 XGP55808 180 aa5.55□□□□□ -1.52
SPARC-208ENST00000538026 ERVFC1-1P60608 527 aa5.55□□□□□ -1.52
SPARC-208ENST00000538026 TWIST1Q15672 202 aa5.55□□□□□ -1.52
SPARC-208ENST00000538026 CT83Q5H943 113 aa5.55□□□□□ -1.52
SPARC-208ENST00000538026 KRTAP26-1Q6PEX3 210 aa5.55□□□□□ -1.52
SPARC-208ENST00000538026 Q8N976 141 aa5.55□□□□□ -1.52
SPARC-208ENST00000538026 ISOC2Q96AB3 205 aa5.55□□□□□ -1.52
SPARC-208ENST00000538026 RPL39LQ96EH5 51 aaKnown RBP5.55□□□□□ -1.52
SPARC-208ENST00000538026 DPH3P1Q9H4G8 78 aa5.55□□□□□ -1.52
SPARC-208ENST00000538026 OSTCQ9NRP0 149 aa5.55□□□□□ -1.52
SPARC-208ENST00000538026 PGPEP1Q9NXJ5 209 aa5.55□□□□□ -1.52
SPARC-208ENST00000538026 KLK12Q9UKR0 248 aa5.55□□□□□ -1.52
SPARC-208ENST00000538026 A8MWL6 223 aa5.54□□□□□ -1.52
SPARC-208ENST00000538026 CDK2AP2O75956 126 aa5.54□□□□□ -1.52
SPARC-208ENST00000538026 TRGC1P0CF51 173 aa5.54□□□□□ -1.52
SPARC-208ENST00000538026 IFITM2Q01629 132 aa5.54□□□□□ -1.52
SPARC-208ENST00000538026 IQCJQ1A5X6 159 aa5.54□□□□□ -1.52
SPARC-208ENST00000538026 TMEM241Q24JQ0 296 aa5.54□□□□□ -1.52
SPARC-208ENST00000538026 RASL11AQ6T310 242 aa5.54□□□□□ -1.52
SPARC-208ENST00000538026 ATRAIDQ6UW56 229 aa5.54□□□□□ -1.52
SPARC-208ENST00000538026 NUP35Q8NFH5 326 aa5.54□□□□□ -1.52
SPARC-208ENST00000538026 TSKUQ8WUA8 353 aa5.54□□□□□ -1.52
SPARC-208ENST00000538026 RNF185Q96GF1 192 aa5.54□□□□□ -1.52
SPARC-208ENST00000538026 GFRA4Q9GZZ7 299 aa5.54□□□□□ -1.52
SPARC-208ENST00000538026 NIT2Q9NQR4 276 aa5.54□□□□□ -1.52
SPARC-208ENST00000538026 HIGD1CA8MV81 97 aa5.53□□□□□ -1.52
SPARC-208ENST00000538026 LECT2O14960 151 aa5.53□□□□□ -1.52
SPARC-208ENST00000538026 RBX1P62877 108 aa5.53□□□□□ -1.52
SPARC-208ENST00000538026 GAGE6Q13070 117 aa5.53□□□□□ -1.52
SPARC-208ENST00000538026 Q8N814 137 aa5.53□□□□□ -1.52
SPARC-208ENST00000538026 NTN5Q8WTR8 489 aaPredicted RBP5.53□□□□□ -1.52
SPARC-208ENST00000538026 BAALCQ8WXS3 180 aa5.53□□□□□ -1.52
SPARC-208ENST00000538026 UBE2WQ96B02 151 aa5.53□□□□□ -1.52
SPARC-208ENST00000538026 IGLV4-60A0A075B6I1 120 aa5.52□□□□□ -1.53
SPARC-208ENST00000538026 TRAV8-3A0A0A6YYJ7 113 aa5.52□□□□□ -1.53
SPARC-208ENST00000538026 FAM231BA6NCW3 169 aa5.52□□□□□ -1.53
SPARC-208ENST00000538026 TMEM262E9PQX1 116 aa5.52□□□□□ -1.53
SPARC-208ENST00000538026 RPS10P46783 165 aaKnown RBP5.52□□□□□ -1.53
SPARC-208ENST00000538026 PEA15Q15121 130 aa5.52□□□□□ -1.53
SPARC-208ENST00000538026 FAM74A3Q4VXF1 159 aa5.52□□□□□ -1.53
SPARC-208ENST00000538026 C20orf203Q8NBC4 194 aa5.52□□□□□ -1.53
SPARC-208ENST00000538026 CHCHD7Q9BUK0 85 aa5.52□□□□□ -1.53
SPARC-208ENST00000538026 PRR34Q9NV39 138 aa5.52□□□□□ -1.53
SPARC-208ENST00000538026 FAM30AQ9NZY2 134 aa5.52□□□□□ -1.53
SPARC-208ENST00000538026 NAT8Q9UHE5 227 aa5.52□□□□□ -1.53
SPARC-208ENST00000538026 TNXBP22105 4242 aa5.52□□□□□ -1.53
SPARC-208ENST00000538026 FLG2Q5D862 2391 aaPredicted RBP5.51□□□□□ -1.53
SPARC-208ENST00000538026 A0A087WX48 190 aa5.51□□□□□ -1.53
SPARC-208ENST00000538026 A0A1B0GUT8 65 aa5.51□□□□□ -1.53
SPARC-208ENST00000538026 SMIM27A0A1W2PRY6 76 aa5.51□□□□□ -1.53
SPARC-208ENST00000538026 H7C1H1 209 aa5.51□□□□□ -1.53
SPARC-208ENST00000538026 RAB4AP20338 218 aa5.51□□□□□ -1.53
SPARC-208ENST00000538026 ADIRFQ15847 76 aa5.51□□□□□ -1.53
SPARC-208ENST00000538026 C15orf54Q8N8G6 183 aa5.51□□□□□ -1.53
SPARC-208ENST00000538026 CHCHD5Q9BSY4 110 aa5.51□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms