RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 GCN1Q92616 2671 aaKnown RBP4.42□□□□□ -1.7
CSMD1-215ENST00000537824 C5orf67F2Z3F1 127 aa4.42□□□□□ -1.7
CSMD1-215ENST00000537824 OVOL3O00110 214 aa4.42□□□□□ -1.7
CSMD1-215ENST00000537824 MRPL53Q96EL3 112 aaKnown RBP4.42□□□□□ -1.7
CSMD1-215ENST00000537824 A0A1B0GXF2 115 aa4.42□□□□□ -1.7
CSMD1-215ENST00000537824 H3BQ85 93 aa4.42□□□□□ -1.7
CSMD1-215ENST00000537824 ENHOQ6UWT2 76 aa4.42□□□□□ -1.7
CSMD1-215ENST00000537824 HIST2H2BCQ6DN03 193 aa4.42□□□□□ -1.7
CSMD1-215ENST00000537824 HIST2H2BDQ6DRA6 164 aa4.42□□□□□ -1.7
CSMD1-215ENST00000537824 FAM19A5Q7Z5A7 132 aaPredicted RBP4.42□□□□□ -1.7
CSMD1-215ENST00000537824 UBE2DNLQ8IWF7 75 aa4.42□□□□□ -1.7
CSMD1-215ENST00000537824 FLNBO75369 2602 aaKnown RBP4.42□□□□□ -1.7
CSMD1-215ENST00000537824 B3GALT5-AS1P59052 145 aa4.41□□□□□ -1.7
CSMD1-215ENST00000537824 PIK3CD-AS1Q5SR53 167 aa4.41□□□□□ -1.7
CSMD1-215ENST00000537824 ANGP03950 147 aaKnown RBP4.41□□□□□ -1.7
CSMD1-215ENST00000537824 PDE6GP18545 87 aa4.41□□□□□ -1.7
CSMD1-215ENST00000537824 C2orf91Q6ZV80 131 aa4.41□□□□□ -1.7
CSMD1-215ENST00000537824 MAPKAPK5-AS1Q8N8E1 139 aa4.41□□□□□ -1.7
CSMD1-215ENST00000537824 COX7A2LO14548 114 aa4.41□□□□□ -1.7
CSMD1-215ENST00000537824 ITPR3Q14573 2671 aa4.41□□□□□ -1.7
CSMD1-215ENST00000537824 RPL18AQ02543 176 aaKnown RBP4.41□□□□□ -1.7
CSMD1-215ENST00000537824 INSL3P51460 131 aa4.41□□□□□ -1.7
CSMD1-215ENST00000537824 NFE4Q86UQ8 179 aa4.41□□□□□ -1.7
CSMD1-215ENST00000537824 TP53TG3Q9ULZ0 132 aa4.41□□□□□ -1.7
CSMD1-215ENST00000537824 SERP1Q9Y6X1 66 aa4.41□□□□□ -1.7
CSMD1-215ENST00000537824 USP17L23D6RBM5 183 aa4.41□□□□□ -1.7
CSMD1-215ENST00000537824 UBE2E1P51965 193 aa4.41□□□□□ -1.7
CSMD1-215ENST00000537824 ZNF672Q499Z4 452 aaPredicted RBP4.41□□□□□ -1.7
CSMD1-215ENST00000537824 TRIAP1O43715 76 aa4.41□□□□□ -1.7
CSMD1-215ENST00000537824 IGHV7-4-1A0A0J9YVY3 117 aa4.41□□□□□ -1.7
CSMD1-215ENST00000537824 ETDCA0A1B0GVM5 59 aa4.4□□□□□ -1.7
CSMD1-215ENST00000537824 H3BUX3 64 aa4.4□□□□□ -1.7
CSMD1-215ENST00000537824 IGHV3-30-3P0DP02 117 aa4.4□□□□□ -1.7
CSMD1-215ENST00000537824 BPY2O14599 106 aa4.4□□□□□ -1.7
CSMD1-215ENST00000537824 COX7CP15954 63 aa4.4□□□□□ -1.7
CSMD1-215ENST00000537824 DAZ2Q13117 558 aaKnown RBP4.4□□□□□ -1.7
CSMD1-215ENST00000537824 BRD3OSQ6XYD6 125 aa4.4□□□□□ -1.7
CSMD1-215ENST00000537824 DAZ4Q86SG3 579 aaKnown RBP4.4□□□□□ -1.7
CSMD1-215ENST00000537824 MBD3L2Q8NHZ7 208 aaPredicted RBP4.4□□□□□ -1.7
CSMD1-215ENST00000537824 DAZ3Q9NR90 486 aaKnown RBP4.4□□□□□ -1.7
CSMD1-215ENST00000537824 IGHV1-69DA0A0B4J2H0 117 aa4.4□□□□□ -1.7
CSMD1-215ENST00000537824 FOXL2NBQ6ZUU3 175 aa4.4□□□□□ -1.7
CSMD1-215ENST00000537824 NDUFC1O43677 76 aa4.4□□□□□ -1.7
CSMD1-215ENST00000537824 RNF166Q96A37 237 aaPredicted RBP4.4□□□□□ -1.71
CSMD1-215ENST00000537824 RSPO1Q2MKA7 263 aaPredicted RBP4.4□□□□□ -1.71
CSMD1-215ENST00000537824 IGHV4OR15-8A0A075B7B6 117 aa4.4□□□□□ -1.71
CSMD1-215ENST00000537824 A0A087WW49 117 aa4.4□□□□□ -1.71
CSMD1-215ENST00000537824 PSCAO43653 123 aa4.4□□□□□ -1.71
CSMD1-215ENST00000537824 TMEM256-PLSCR3K7ERE1 68 aa4.4□□□□□ -1.71
CSMD1-215ENST00000537824 GNLYP22749 145 aa4.4□□□□□ -1.71
CSMD1-215ENST00000537824 SAA4P35542 130 aa4.4□□□□□ -1.71
CSMD1-215ENST00000537824 LY6HO94772 140 aa4.39□□□□□ -1.71
CSMD1-215ENST00000537824 MDS2Q8NDY4 140 aa4.39□□□□□ -1.71
CSMD1-215ENST00000537824 EPOPA6NHQ4 379 aa4.39□□□□□ -1.71
CSMD1-215ENST00000537824 ATP6V0E1O15342 81 aa4.39□□□□□ -1.71
CSMD1-215ENST00000537824 CD59P13987 128 aa4.39□□□□□ -1.71
CSMD1-215ENST00000537824 SCXQ7RTU7 201 aa4.39□□□□□ -1.71
CSMD1-215ENST00000537824 FAM110DQ8TAY7 271 aaPredicted RBP4.39□□□□□ -1.71
CSMD1-215ENST00000537824 A0A0J9YXY3 114 aa4.39□□□□□ -1.71
CSMD1-215ENST00000537824 PMAIP1Q13794 54 aa4.39□□□□□ -1.71
CSMD1-215ENST00000537824 C1orf53Q5VUE5 145 aa4.39□□□□□ -1.71
CSMD1-215ENST00000537824 COL4A6Q14031 1691 aa4.39□□□□□ -1.71
CSMD1-215ENST00000537824 Q6ZQT7 251 aa4.39□□□□□ -1.71
CSMD1-215ENST00000537824 JMJD7-PLA2G4BH0Y9G9 81 aa4.39□□□□□ -1.71
CSMD1-215ENST00000537824 IGKV1-17P01599 117 aa4.39□□□□□ -1.71
CSMD1-215ENST00000537824 NDUFA4O00483 81 aa4.39□□□□□ -1.71
CSMD1-215ENST00000537824 P0DMU3 169 aa4.39□□□□□ -1.71
CSMD1-215ENST00000537824 FAM231AP0DMU4 169 aa4.39□□□□□ -1.71
CSMD1-215ENST00000537824 FAM231CP0DMU5 169 aa4.39□□□□□ -1.71
CSMD1-215ENST00000537824 PLA2G5P39877 138 aa4.39□□□□□ -1.71
CSMD1-215ENST00000537824 PRR4Q16378 134 aa4.39□□□□□ -1.71
CSMD1-215ENST00000537824 LOC107984640A0A0U1RRK4 108 aa4.38□□□□□ -1.71
CSMD1-215ENST00000537824 PATE2Q6UY27 113 aa4.38□□□□□ -1.71
CSMD1-215ENST00000537824 PRAC2D3DTV9 90 aa4.38□□□□□ -1.71
CSMD1-215ENST00000537824 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.38□□□□□ -1.71
CSMD1-215ENST00000537824 ZNF292O60281 2723 aa4.38□□□□□ -1.71
CSMD1-215ENST00000537824 ZNF524Q96C55 264 aa4.38□□□□□ -1.71
CSMD1-215ENST00000537824 KLK5Q9Y337 293 aaPredicted RBP4.38□□□□□ -1.71
CSMD1-215ENST00000537824 CRIPAKQ8N1N5 446 aa4.38□□□□□ -1.71
CSMD1-215ENST00000537824 IGLV3-19P01714 112 aa4.38□□□□□ -1.71
CSMD1-215ENST00000537824 SLPIP03973 132 aa4.38□□□□□ -1.71
CSMD1-215ENST00000537824 COL8A2P25067 703 aa4.38□□□□□ -1.71
CSMD1-215ENST00000537824 IGHV3-33P01772 117 aa4.38□□□□□ -1.71
CSMD1-215ENST00000537824 CFAP126Q5VTH2 177 aa4.38□□□□□ -1.71
CSMD1-215ENST00000537824 C19orf71A6NCJ1 209 aa4.38□□□□□ -1.71
CSMD1-215ENST00000537824 IGLV2-8P01709 118 aa4.38□□□□□ -1.71
CSMD1-215ENST00000537824 IGKV4-1P06312 121 aa4.38□□□□□ -1.71
CSMD1-215ENST00000537824 UBE2BP63146 152 aa4.38□□□□□ -1.71
CSMD1-215ENST00000537824 ZNF491Q8N8L2 437 aa4.37□□□□□ -1.71
CSMD1-215ENST00000537824 RNF114Q9Y508 228 aa4.37□□□□□ -1.71
CSMD1-215ENST00000537824 NRGNQ92686 78 aa4.37□□□□□ -1.71
CSMD1-215ENST00000537824 C11orf1Q9H5F2 150 aa4.37□□□□□ -1.71
CSMD1-215ENST00000537824 IGHV4-59P01825 116 aa4.37□□□□□ -1.71
CSMD1-215ENST00000537824 LINC00311Q8N616 119 aa4.37□□□□□ -1.71
CSMD1-215ENST00000537824 MAP1AP78559 2803 aaPredicted RBP4.37□□□□□ -1.71
CSMD1-215ENST00000537824 UFSP1Q6NVU6 142 aa4.37□□□□□ -1.71
CSMD1-215ENST00000537824 IGHV1-58A0A0C4DH39 117 aa4.37□□□□□ -1.71
CSMD1-215ENST00000537824 GATA4P43694 442 aa4.37□□□□□ -1.71
CSMD1-215ENST00000537824 SHISA2Q6UWI4 295 aa4.37□□□□□ -1.71
CSMD1-215ENST00000537824 UBE2AP49459 152 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms