RNA–Protein interactions for RNA: ENST00000537335.5

POLR1B-216, Transcript of RNA polymerase I subunit B, humanhuman

TSL 2 BASIC

Gene POLR1B, Length 4,961 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-216ENST00000537335 Q0VFX4 171 aa9.04□□□□□ -0.96
POLR1B-216ENST00000537335 TNRC6BQ9UPQ9 1833 aaKnown RBP9.04□□□□□ -0.96
POLR1B-216ENST00000537335 VPREB1P12018 145 aa9.03□□□□□ -0.96
POLR1B-216ENST00000537335 PRR15LQ9BU68 103 aa9.03□□□□□ -0.96
POLR1B-216ENST00000537335 LCTP09848 1927 aa9.03□□□□□ -0.96
POLR1B-216ENST00000537335 MED13Q9UHV7 2174 aa9.03□□□□□ -0.96
POLR1B-216ENST00000537335 MED13LQ71F56 2210 aa9.03□□□□□ -0.96
POLR1B-216ENST00000537335 MBD3L4A6NDZ8 208 aaPredicted RBP9.03□□□□□ -0.96
POLR1B-216ENST00000537335 MBD3L3A6NE82 208 aaPredicted RBP9.03□□□□□ -0.96
POLR1B-216ENST00000537335 MBD3L5A6NJ08 208 aaPredicted RBP9.03□□□□□ -0.96
POLR1B-216ENST00000537335 ZNF883P0CG24 379 aa9.03□□□□□ -0.96
POLR1B-216ENST00000537335 MDS2Q8NDY4 140 aa9.03□□□□□ -0.96
POLR1B-216ENST00000537335 TMEM263Q8WUH6 116 aaKnown RBP9.03□□□□□ -0.96
POLR1B-216ENST00000537335 CTSGP08311 255 aa9.03□□□□□ -0.96
POLR1B-216ENST00000537335 CNOT1A5YKK6 2376 aaKnown RBP9.03□□□□□ -0.96
POLR1B-216ENST00000537335 COX7BP24311 80 aa9.03□□□□□ -0.96
POLR1B-216ENST00000537335 UBE2D3P61077 147 aa9.02□□□□□ -0.96
POLR1B-216ENST00000537335 UBE2D2P62837 147 aa9.02□□□□□ -0.96
POLR1B-216ENST00000537335 PRR4Q16378 134 aa9.02□□□□□ -0.96
POLR1B-216ENST00000537335 ZNF80P51504 273 aaPredicted RBP9.02□□□□□ -0.97
POLR1B-216ENST00000537335 C11orf53Q8IXP5 236 aa9.02□□□□□ -0.97
POLR1B-216ENST00000537335 IGLV11-55A0A075B6I3 123 aa9.02□□□□□ -0.97
POLR1B-216ENST00000537335 UBE2D1P51668 147 aa9.01□□□□□ -0.97
POLR1B-216ENST00000537335 K7EQD1 137 aa9.01□□□□□ -0.97
POLR1B-216ENST00000537335 CAMK2N2Q96S95 79 aa9.01□□□□□ -0.97
POLR1B-216ENST00000537335 SCN10AQ9Y5Y9 1956 aa9.01□□□□□ -0.97
POLR1B-216ENST00000537335 A0A087WVE0 104 aa9□□□□□ -0.97
POLR1B-216ENST00000537335 K7ERS5 55 aa9□□□□□ -0.97
POLR1B-216ENST00000537335 IGHV4OR15-8A0A075B7B6 117 aa9□□□□□ -0.97
POLR1B-216ENST00000537335 A0A087WW49 117 aa9□□□□□ -0.97
POLR1B-216ENST00000537335 A0A096LPF7 62 aa9□□□□□ -0.97
POLR1B-216ENST00000537335 FAM222AQ5U5X8 452 aa9□□□□□ -0.97
POLR1B-216ENST00000537335 CEMP1Q6PRD7 247 aaPredicted RBP9□□□□□ -0.97
POLR1B-216ENST00000537335 ZFAND3Q9H8U3 227 aa9□□□□□ -0.97
POLR1B-216ENST00000537335 CDKN2A-AS1Q9UH64 79 aa9□□□□□ -0.97
POLR1B-216ENST00000537335 RNF138Q8WVD3 245 aa9□□□□□ -0.97
POLR1B-216ENST00000537335 IGKV1D-37A0A075B6S9 117 aa9□□□□□ -0.97
POLR1B-216ENST00000537335 NDUFA1O15239 70 aa9□□□□□ -0.97
POLR1B-216ENST00000537335 WNK1Q9H4A3 2382 aa8.99□□□□□ -0.97
POLR1B-216ENST00000537335 WT1P19544 449 aaPredicted RBP8.99□□□□□ -0.97
POLR1B-216ENST00000537335 NOP10Q9NPE3 64 aaKnown RBP8.99□□□□□ -0.97
POLR1B-216ENST00000537335 TNCP24821 2201 aa8.99□□□□□ -0.97
POLR1B-216ENST00000537335 LRCOL1A6NCL2 159 aa8.99□□□□□ -0.97
POLR1B-216ENST00000537335 IGKV4-1P06312 121 aa8.99□□□□□ -0.97
POLR1B-216ENST00000537335 KAAG1Q9UBP8 84 aa8.99□□□□□ -0.97
POLR1B-216ENST00000537335 FREM1Q5H8C1 2179 aa8.99□□□□□ -0.97
POLR1B-216ENST00000537335 EBI3Q14213 229 aa8.99□□□□□ -0.97
POLR1B-216ENST00000537335 Q6ZS46 218 aa8.99□□□□□ -0.97
POLR1B-216ENST00000537335 AJUBAQ96IF1 538 aa8.99□□□□□ -0.97
POLR1B-216ENST00000537335 SBF1O95248 1867 aa8.99□□□□□ -0.97
POLR1B-216ENST00000537335 RNF185Q96GF1 192 aa8.99□□□□□ -0.97
POLR1B-216ENST00000537335 HHLA3Q9XRX5 114 aa8.99□□□□□ -0.97
POLR1B-216ENST00000537335 TRBV7-7A0A0K0K1E9 115 aa8.98□□□□□ -0.97
POLR1B-216ENST00000537335 H3BUA1 57 aa8.98□□□□□ -0.97
POLR1B-216ENST00000537335 CRIP2P52943 208 aaPredicted RBP8.98□□□□□ -0.97
POLR1B-216ENST00000537335 C4orf26Q17RF5 130 aa8.98□□□□□ -0.97
POLR1B-216ENST00000537335 IGLV4-3A0A075B6K6 122 aa8.98□□□□□ -0.97
POLR1B-216ENST00000537335 E7EQL1 145 aa8.97□□□□□ -0.97
POLR1B-216ENST00000537335 H0Y9J4 135 aa8.97□□□□□ -0.97
POLR1B-216ENST00000537335 LY6HO94772 140 aa8.97□□□□□ -0.97
POLR1B-216ENST00000537335 PYGO1Q9Y3Y4 419 aa8.97□□□□□ -0.97
POLR1B-216ENST00000537335 B4DSR2 109 aa8.97□□□□□ -0.97
POLR1B-216ENST00000537335 IGLV1-44P01699 117 aa8.97□□□□□ -0.97
POLR1B-216ENST00000537335 KRTAP27-1Q3LI81 207 aa8.97□□□□□ -0.97
POLR1B-216ENST00000537335 IGLV10-54A0A075B6I4 117 aa8.97□□□□□ -0.97
POLR1B-216ENST00000537335 URB1-AS1Q96HZ7 61 aa8.97□□□□□ -0.97
POLR1B-216ENST00000537335 BRWD3Q6RI45 1802 aa8.96□□□□□ -0.97
POLR1B-216ENST00000537335 PSPHP1O15172 72 aa8.96□□□□□ -0.97
POLR1B-216ENST00000537335 CRYGAP11844 174 aa8.96□□□□□ -0.97
POLR1B-216ENST00000537335 TRBV7-6A0A0J9YX20 115 aa8.96□□□□□ -0.98
POLR1B-216ENST00000537335 E7EUB6 86 aa8.95□□□□□ -0.98
POLR1B-216ENST00000537335 BRCA1P38398 1863 aaKnown RBP8.95□□□□□ -0.98
POLR1B-216ENST00000537335 ZSWIM8A7E2V4 1837 aa8.95□□□□□ -0.98
POLR1B-216ENST00000537335 IBA57-AS1B1ANH7 110 aa8.95□□□□□ -0.98
POLR1B-216ENST00000537335 CCKP06307 115 aa8.95□□□□□ -0.98
POLR1B-216ENST00000537335 UBE2DNLQ8IWF7 75 aa8.95□□□□□ -0.98
POLR1B-216ENST00000537335 RUSC1-AS1Q66K80 236 aa8.95□□□□□ -0.98
POLR1B-216ENST00000537335 SEM1Q6ZVN7 128 aa8.95□□□□□ -0.98
POLR1B-216ENST00000537335 RMI2Q96E14 147 aa8.95□□□□□ -0.98
POLR1B-216ENST00000537335 KIAA1549Q9HCM3 1950 aa8.95□□□□□ -0.98
POLR1B-216ENST00000537335 OBSL1O75147 1896 aa8.95□□□□□ -0.98
POLR1B-216ENST00000537335 TRBV10-1A0A0K0K1A3 114 aa8.94□□□□□ -0.98
POLR1B-216ENST00000537335 SPAG11BQ08648 103 aa8.94□□□□□ -0.98
POLR1B-216ENST00000537335 NPBQ8NG41 125 aa8.94□□□□□ -0.98
POLR1B-216ENST00000537335 A8MZ25 164 aa8.94□□□□□ -0.98
POLR1B-216ENST00000537335 PRYO14603 147 aa8.94□□□□□ -0.98
POLR1B-216ENST00000537335 CRIP1P50238 77 aa8.94□□□□□ -0.98
POLR1B-216ENST00000537335 NBASA2RRP1 2371 aa8.94□□□□□ -0.98
POLR1B-216ENST00000537335 PLXND1Q9Y4D7 1925 aa8.94□□□□□ -0.98
POLR1B-216ENST00000537335 RITA1Q96K30 269 aa8.94□□□□□ -0.98
POLR1B-216ENST00000537335 SIRPDQ9H106 197 aa8.94□□□□□ -0.98
POLR1B-216ENST00000537335 IGLV2-23P01705 113 aa8.93□□□□□ -0.98
POLR1B-216ENST00000537335 A0A0G2JNJ9 132 aa8.93□□□□□ -0.98
POLR1B-216ENST00000537335 A0A0J9YX75 114 aa8.93□□□□□ -0.98
POLR1B-216ENST00000537335 MYCNOSP40205 109 aa8.93□□□□□ -0.98
POLR1B-216ENST00000537335 Q9UFV3 132 aa8.93□□□□□ -0.98
POLR1B-216ENST00000537335 SP5Q6BEB4 398 aaPredicted RBP8.93□□□□□ -0.98
POLR1B-216ENST00000537335 BPESC1Q9GZL8 116 aa8.93□□□□□ -0.98
POLR1B-216ENST00000537335 TNS1Q9HBL0 1735 aaKnown RBP8.92□□□□□ -0.98
POLR1B-216ENST00000537335 IGHV7-81A0A0B4J1V7 117 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 189 ms