RNA–Protein interactions for RNA: ENST00000537033.1

SYNE1-235, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 4

Gene SYNE1, Length 647 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-235ENST00000537033 HMSDA8MTL9 139 aa9.13□□□□□ -0.95
SYNE1-235ENST00000537033 SNAI2O43623 268 aa9.13□□□□□ -0.95
SYNE1-235ENST00000537033 ANGP03950 147 aaKnown RBP9.13□□□□□ -0.95
SYNE1-235ENST00000537033 TMEM97Q5BJF2 176 aa9.13□□□□□ -0.95
SYNE1-235ENST00000537033 AP1S3Q96PC3 154 aa9.13□□□□□ -0.95
SYNE1-235ENST00000537033 MLST8Q9BVC4 326 aa9.13□□□□□ -0.95
SYNE1-235ENST00000537033 SSBP4Q9BWG4 385 aaPredicted RBP9.13□□□□□ -0.95
SYNE1-235ENST00000537033 MUC21A0A0G2JKD1 596 aa9.12□□□□□ -0.95
SYNE1-235ENST00000537033 MUC21A0A140T8X8 626 aa9.12□□□□□ -0.95
SYNE1-235ENST00000537033 MPV17L2Q567V2 206 aa9.12□□□□□ -0.95
SYNE1-235ENST00000537033 TMUB2Q71RG4 321 aa9.12□□□□□ -0.95
SYNE1-235ENST00000537033 DEFB104AQ8WTQ1 72 aa9.12□□□□□ -0.95
SYNE1-235ENST00000537033 CHAC1Q9BUX1 264 aa9.12□□□□□ -0.95
SYNE1-235ENST00000537033 MANBALQ9NQG1 85 aa9.12□□□□□ -0.95
SYNE1-235ENST00000537033 HLA-DQA1P01909 254 aa9.11□□□□□ -0.95
SYNE1-235ENST00000537033 RPL35P42766 123 aaKnown RBP9.11□□□□□ -0.95
SYNE1-235ENST00000537033 SSTP61278 116 aa9.11□□□□□ -0.95
SYNE1-235ENST00000537033 MIAQ16674 131 aa9.1□□□□□ -0.95
SYNE1-235ENST00000537033 ENHOQ6UWT2 76 aa9.1□□□□□ -0.95
SYNE1-235ENST00000537033 TCTE3Q8IZS6 198 aa9.1□□□□□ -0.95
SYNE1-235ENST00000537033 HERC1Q15751 4861 aa9.1□□□□□ -0.95
SYNE1-235ENST00000537033 MYCBP2O75592 4640 aa9.09□□□□□ -0.95
SYNE1-235ENST00000537033 TRBV25-1A0A075B6N4 114 aa9.09□□□□□ -0.95
SYNE1-235ENST00000537033 TEX46H3BTG2 121 aa9.09□□□□□ -0.95
SYNE1-235ENST00000537033 H7C1H1 209 aa9.09□□□□□ -0.95
SYNE1-235ENST00000537033 DAZAP1Q96EP5 407 aaKnown RBP9.09□□□□□ -0.95
SYNE1-235ENST00000537033 DERL1Q9BUN8 251 aa9.09□□□□□ -0.95
SYNE1-235ENST00000537033 TPPP3Q9BW30 176 aa9.09□□□□□ -0.95
SYNE1-235ENST00000537033 GNG13Q9P2W3 67 aa9.09□□□□□ -0.95
SYNE1-235ENST00000537033 VAX2Q9UIW0 290 aa9.09□□□□□ -0.95
SYNE1-235ENST00000537033 MGPP08493 103 aa9.08□□□□□ -0.96
SYNE1-235ENST00000537033 RPS20P60866 119 aaKnown RBP9.08□□□□□ -0.96
SYNE1-235ENST00000537033 CENPWQ5EE01 88 aa9.08□□□□□ -0.96
SYNE1-235ENST00000537033 FER1L6-AS1Q8NA97 138 aa9.08□□□□□ -0.96
SYNE1-235ENST00000537033 C11orf52Q96A22 123 aa9.08□□□□□ -0.96
SYNE1-235ENST00000537033 XKRY2A2RUG3 117 aa9.07□□□□□ -0.96
SYNE1-235ENST00000537033 USP17L23D6RBM5 183 aa9.07□□□□□ -0.96
SYNE1-235ENST00000537033 GAGE6Q13070 117 aa9.07□□□□□ -0.96
SYNE1-235ENST00000537033 EIF5AL1Q6IS14 154 aaKnown RBP9.07□□□□□ -0.96
SYNE1-235ENST00000537033 CIRBP-AS1Q8TBR5 109 aa9.07□□□□□ -0.96
SYNE1-235ENST00000537033 IGHV1-24A0A0C4DH33 117 aa9.06□□□□□ -0.96
SYNE1-235ENST00000537033 KRTAP29-1A8MX34 341 aaPredicted RBP9.06□□□□□ -0.96
SYNE1-235ENST00000537033 IGLV2-8P01709 118 aa9.06□□□□□ -0.96
SYNE1-235ENST00000537033 GNG4P50150 75 aa9.06□□□□□ -0.96
SYNE1-235ENST00000537033 RAB5CP51148 216 aa9.06□□□□□ -0.96
SYNE1-235ENST00000537033 RBX1P62877 108 aa9.06□□□□□ -0.96
SYNE1-235ENST00000537033 CACNG7P62955 275 aa9.06□□□□□ -0.96
SYNE1-235ENST00000537033 CLPSL2Q6UWE3 100 aa9.06□□□□□ -0.96
SYNE1-235ENST00000537033 NTM-AS1Q6ZSK4 140 aa9.06□□□□□ -0.96
SYNE1-235ENST00000537033 LINC00269Q8N2A0 174 aa9.06□□□□□ -0.96
SYNE1-235ENST00000537033 OR2D3Q8NGH3 330 aa9.06□□□□□ -0.96
SYNE1-235ENST00000537033 SMIM12Q96EX1 92 aa9.06□□□□□ -0.96
SYNE1-235ENST00000537033 KIF25-AS1Q9Y6Z4 181 aa9.06□□□□□ -0.96
SYNE1-235ENST00000537033 TRAV1-1A0A0B4J248 108 aa9.05□□□□□ -0.96
SYNE1-235ENST00000537033 GZMBP10144 247 aa9.05□□□□□ -0.96
SYNE1-235ENST00000537033 IQCJQ1A5X6 159 aa9.05□□□□□ -0.96
SYNE1-235ENST00000537033 PRR34Q9NV39 138 aa9.05□□□□□ -0.96
SYNE1-235ENST00000537033 F2Z2F3 143 aa9.04□□□□□ -0.96
SYNE1-235ENST00000537033 M0QY20 66 aa9.04□□□□□ -0.96
SYNE1-235ENST00000537033 PDE6DO43924 150 aa9.04□□□□□ -0.96
SYNE1-235ENST00000537033 IFNA1P01562 189 aa9.04□□□□□ -0.96
SYNE1-235ENST00000537033 P01737 135 aa9.04□□□□□ -0.96
SYNE1-235ENST00000537033 TRGC1P0CF51 173 aa9.04□□□□□ -0.96
SYNE1-235ENST00000537033 IGLC6P0CF74 106 aa9.04□□□□□ -0.96
SYNE1-235ENST00000537033 CCL20P78556 96 aa9.04□□□□□ -0.96
SYNE1-235ENST00000537033 DGAT2L7PQ6IED9 249 aa9.04□□□□□ -0.96
SYNE1-235ENST00000537033 BIN3Q9NQY0 253 aa9.04□□□□□ -0.96
SYNE1-235ENST00000537033 PRSS1P07477 247 aa9.03□□□□□ -0.96
SYNE1-235ENST00000537033 NKX2-5P52952 324 aaPredicted RBP9.03□□□□□ -0.96
SYNE1-235ENST00000537033 MEF2BQ02080 365 aaPredicted RBP9.03□□□□□ -0.96
SYNE1-235ENST00000537033 SUMO4Q6EEV6 95 aa9.03□□□□□ -0.96
SYNE1-235ENST00000537033 DNAH8Q96JB1 4490 aa9.02□□□□□ -0.96
SYNE1-235ENST00000537033 C19orf71A6NCJ1 209 aa9.02□□□□□ -0.97
SYNE1-235ENST00000537033 REG3AQ06141 175 aa9.02□□□□□ -0.97
SYNE1-235ENST00000537033 RASL11AQ6T310 242 aa9.02□□□□□ -0.97
SYNE1-235ENST00000537033 TMEM243Q9BU79 118 aa9.02□□□□□ -0.97
SYNE1-235ENST00000537033 IGLV10-54A0A075B6I4 117 aa9.01□□□□□ -0.97
SYNE1-235ENST00000537033 RAB19A4D1S5 217 aa9.01□□□□□ -0.97
SYNE1-235ENST00000537033 UBE2L6O14933 153 aa9.01□□□□□ -0.97
SYNE1-235ENST00000537033 RPL37AP61513 92 aaKnown RBP9.01□□□□□ -0.97
SYNE1-235ENST00000537033 CLRN3Q8NCR9 226 aa9.01□□□□□ -0.97
SYNE1-235ENST00000537033 DPH3P1Q9H4G8 78 aa9.01□□□□□ -0.97
SYNE1-235ENST00000537033 MED9Q9NWA0 146 aa9.01□□□□□ -0.97
SYNE1-235ENST00000537033 TRAV8-4A0A0B4J246 113 aa9□□□□□ -0.97
SYNE1-235ENST00000537033 BCL2P10415 239 aa9□□□□□ -0.97
SYNE1-235ENST00000537033 SULT1A2P50226 295 aa9□□□□□ -0.97
SYNE1-235ENST00000537033 LYZL1Q6UWQ5 148 aa9□□□□□ -0.97
SYNE1-235ENST00000537033 C9orf163Q8N9P6 203 aa9□□□□□ -0.97
SYNE1-235ENST00000537033 PGLYRP4Q96LB8 373 aa9□□□□□ -0.97
SYNE1-235ENST00000537033 NIT2Q9NQR4 276 aa9□□□□□ -0.97
SYNE1-235ENST00000537033 hDV102S1A0JD36 115 aa8.99□□□□□ -0.97
SYNE1-235ENST00000537033 OXTP01178 125 aa8.99□□□□□ -0.97
SYNE1-235ENST00000537033 TAGLN2P37802 199 aaKnown RBP8.99□□□□□ -0.97
SYNE1-235ENST00000537033 KRTAP10-4P60372 401 aaPredicted RBP8.99□□□□□ -0.97
SYNE1-235ENST00000537033 WDR73Q6P4I2 378 aa8.99□□□□□ -0.97
SYNE1-235ENST00000537033 AP5S1Q9NUS5 200 aa8.99□□□□□ -0.97
SYNE1-235ENST00000537033 A0A1B0GUV1 79 aa8.98□□□□□ -0.97
SYNE1-235ENST00000537033 NTF3P20783 257 aa8.98□□□□□ -0.97
SYNE1-235ENST00000537033 CTRLP40313 264 aa8.98□□□□□ -0.97
SYNE1-235ENST00000537033 COTL1Q14019 142 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 202.9 ms