RNA–Protein interactions for RNA: ENST00000536823.5

YBX3-206, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 840 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-206ENST00000536823 NFE4Q86UQ8 179 aa4.75□□□□□ -1.65
YBX3-206ENST00000536823 C10orf126Q8N4M7 172 aa4.75□□□□□ -1.65
YBX3-206ENST00000536823 JPT2Q9H910 190 aa4.75□□□□□ -1.65
YBX3-206ENST00000536823 SCRT2Q9NQ03 307 aa4.75□□□□□ -1.65
YBX3-206ENST00000536823 MANBALQ9NQG1 85 aa4.75□□□□□ -1.65
YBX3-206ENST00000536823 IGHV3-38A0A0C4DH36 116 aa4.74□□□□□ -1.65
YBX3-206ENST00000536823 GRIFINA4D1Z8 144 aa4.74□□□□□ -1.65
YBX3-206ENST00000536823 CRYGDP07320 174 aa4.74□□□□□ -1.65
YBX3-206ENST00000536823 SULT1A2P50226 295 aa4.74□□□□□ -1.65
YBX3-206ENST00000536823 ERVFC1-1P60608 527 aa4.74□□□□□ -1.65
YBX3-206ENST00000536823 LELP1Q5T871 98 aa4.74□□□□□ -1.65
YBX3-206ENST00000536823 EIF5AL1Q6IS14 154 aaKnown RBP4.74□□□□□ -1.65
YBX3-206ENST00000536823 ATP6V0E2Q8NHE4 81 aa4.74□□□□□ -1.65
YBX3-206ENST00000536823 C11orf52Q96A22 123 aa4.74□□□□□ -1.65
YBX3-206ENST00000536823 SAMD10Q9BYL1 202 aa4.74□□□□□ -1.65
YBX3-206ENST00000536823 GTSF1LQ9H1H1 148 aa4.74□□□□□ -1.65
YBX3-206ENST00000536823 GNG13Q9P2W3 67 aa4.74□□□□□ -1.65
YBX3-206ENST00000536823 ABCA13Q86UQ4 5058 aa4.74□□□□□ -1.65
YBX3-206ENST00000536823 TMSB15BA0A087X1C1 80 aa4.73□□□□□ -1.65
YBX3-206ENST00000536823 TRAV8-6A0A0B4J262 113 aa4.73□□□□□ -1.65
YBX3-206ENST00000536823 CDK2AP2O75956 126 aa4.73□□□□□ -1.65
YBX3-206ENST00000536823 C1QBP02746 253 aa4.73□□□□□ -1.65
YBX3-206ENST00000536823 CCL20P78556 96 aa4.73□□□□□ -1.65
YBX3-206ENST00000536823 GAGE1Q13065 139 aa4.73□□□□□ -1.65
YBX3-206ENST00000536823 GAGE4Q13068 117 aa4.73□□□□□ -1.65
YBX3-206ENST00000536823 GAGE5Q13069 117 aa4.73□□□□□ -1.65
YBX3-206ENST00000536823 OR10J3Q5JRS4 329 aa4.73□□□□□ -1.65
YBX3-206ENST00000536823 SLC51BQ86UW2 128 aa4.73□□□□□ -1.65
YBX3-206ENST00000536823 BAGE2Q86Y30 109 aa4.73□□□□□ -1.65
YBX3-206ENST00000536823 ZFP82Q8N141 532 aa4.73□□□□□ -1.65
YBX3-206ENST00000536823 C14orf178Q8N769 122 aaPredicted RBP4.73□□□□□ -1.65
YBX3-206ENST00000536823 SFRP2Q96HF1 295 aa4.73□□□□□ -1.65
YBX3-206ENST00000536823 PHLDA3Q9Y5J5 127 aa4.73□□□□□ -1.65
YBX3-206ENST00000536823 TEX46H3BTG2 121 aa4.72□□□□□ -1.65
YBX3-206ENST00000536823 M0R381 172 aa4.72□□□□□ -1.65
YBX3-206ENST00000536823 SNAI2O43623 268 aa4.72□□□□□ -1.65
YBX3-206ENST00000536823 RPL35P42766 123 aaKnown RBP4.72□□□□□ -1.65
YBX3-206ENST00000536823 RPL19P84098 196 aaKnown RBP4.72□□□□□ -1.65
YBX3-206ENST00000536823 TWIST1Q15672 202 aa4.72□□□□□ -1.65
YBX3-206ENST00000536823 FAM74A4Q5TZK3 123 aa4.72□□□□□ -1.65
YBX3-206ENST00000536823 DERL1Q9BUN8 251 aa4.72□□□□□ -1.65
YBX3-206ENST00000536823 Q9UF83 564 aa4.72□□□□□ -1.65
YBX3-206ENST00000536823 VPS13BQ7Z7G8 4022 aa4.71□□□□□ -1.65
YBX3-206ENST00000536823 A0A087WTM6 91 aa4.71□□□□□ -1.66
YBX3-206ENST00000536823 A0A087WWC5 75 aa4.71□□□□□ -1.66
YBX3-206ENST00000536823 TRBV10-1A0A0K0K1A3 114 aa4.71□□□□□ -1.66
YBX3-206ENST00000536823 IBA57-AS1B1ANH7 110 aa4.71□□□□□ -1.66
YBX3-206ENST00000536823 USP17L23D6RBM5 183 aa4.71□□□□□ -1.66
YBX3-206ENST00000536823 IFNA1P01562 189 aa4.71□□□□□ -1.66
YBX3-206ENST00000536823 IGHV3-30P01768 117 aa4.71□□□□□ -1.66
YBX3-206ENST00000536823 IGHV3-33P01772 117 aa4.71□□□□□ -1.66
YBX3-206ENST00000536823 OR5AL1P0C617 328 aa4.71□□□□□ -1.66
YBX3-206ENST00000536823 IGHV3-30-3P0DP02 117 aa4.71□□□□□ -1.66
YBX3-206ENST00000536823 IGHV3-30-5P0DP03 117 aa4.71□□□□□ -1.66
YBX3-206ENST00000536823 MEF2BQ02080 365 aaPredicted RBP4.71□□□□□ -1.66
YBX3-206ENST00000536823 LAGE3Q14657 143 aa4.71□□□□□ -1.66
YBX3-206ENST00000536823 CENPWQ5EE01 88 aa4.71□□□□□ -1.66
YBX3-206ENST00000536823 PRR27Q6MZM9 219 aa4.71□□□□□ -1.66
YBX3-206ENST00000536823 AKAP14Q86UN6 197 aa4.71□□□□□ -1.66
YBX3-206ENST00000536823 OR10AG1Q8NH19 301 aa4.71□□□□□ -1.66
YBX3-206ENST00000536823 RPL36ALQ969Q0 106 aaKnown RBP4.71□□□□□ -1.66
YBX3-206ENST00000536823 PDE6DO43924 150 aa4.7□□□□□ -1.66
YBX3-206ENST00000536823 IGLV2-8P01709 118 aa4.7□□□□□ -1.66
YBX3-206ENST00000536823 BCL2P10415 239 aa4.7□□□□□ -1.66
YBX3-206ENST00000536823 C9orf62Q8N4C0 152 aa4.7□□□□□ -1.66
YBX3-206ENST00000536823 TMEM18Q96B42 140 aa4.7□□□□□ -1.66
YBX3-206ENST00000536823 SMIM12Q96EX1 92 aa4.7□□□□□ -1.66
YBX3-206ENST00000536823 Q9HAA7 133 aa4.7□□□□□ -1.66
YBX3-206ENST00000536823 TRBV20OR9-2A0A075B6H5 130 aa4.69□□□□□ -1.66
YBX3-206ENST00000536823 C19orf71A6NCJ1 209 aa4.69□□□□□ -1.66
YBX3-206ENST00000536823 LRCOL1A6NCL2 159 aa4.69□□□□□ -1.66
YBX3-206ENST00000536823 PSCAO43653 123 aa4.69□□□□□ -1.66
YBX3-206ENST00000536823 FUSP35637 526 aaKnown RBP eCLIP4.69□□□□□ -1.66
YBX3-206ENST00000536823 TAGLN2P37802 199 aaKnown RBP4.69□□□□□ -1.66
YBX3-206ENST00000536823 RAB4BP61018 213 aa4.69□□□□□ -1.66
YBX3-206ENST00000536823 UBE2D3P61077 147 aa4.69□□□□□ -1.66
YBX3-206ENST00000536823 UBE2D2P62837 147 aa4.69□□□□□ -1.66
YBX3-206ENST00000536823 RPL36AP83881 106 aaKnown RBP4.69□□□□□ -1.66
YBX3-206ENST00000536823 ZNF56Q15929 161 aa4.69□□□□□ -1.66
YBX3-206ENST00000536823 SPANXN1Q5VSR9 72 aa4.69□□□□□ -1.66
YBX3-206ENST00000536823 OR10G8Q8NGN5 311 aa4.69□□□□□ -1.66
YBX3-206ENST00000536823 AP1S3Q96PC3 154 aa4.69□□□□□ -1.66
YBX3-206ENST00000536823 VAX2Q9UIW0 290 aa4.69□□□□□ -1.66
YBX3-206ENST00000536823 TRBV7-3A0A075B6L6 115 aa4.68□□□□□ -1.66
YBX3-206ENST00000536823 MUC21A0A0G2JKD1 596 aa4.68□□□□□ -1.66
YBX3-206ENST00000536823 IGLV5-39A0A0G2JS06 123 aa4.68□□□□□ -1.66
YBX3-206ENST00000536823 MUC21A0A140T8X8 626 aa4.68□□□□□ -1.66
YBX3-206ENST00000536823 RAB19A4D1S5 217 aa4.68□□□□□ -1.66
YBX3-206ENST00000536823 IGLC6P0CF74 106 aa4.68□□□□□ -1.66
YBX3-206ENST00000536823 GNG4P50150 75 aa4.68□□□□□ -1.66
YBX3-206ENST00000536823 RPS20P60866 119 aaKnown RBP4.68□□□□□ -1.66
YBX3-206ENST00000536823 DAZ4Q86SG3 579 aaKnown RBP4.68□□□□□ -1.66
YBX3-206ENST00000536823 NIT1Q86X76 327 aa4.68□□□□□ -1.66
YBX3-206ENST00000536823 MAPKAPK5-AS1Q8N8E1 139 aa4.68□□□□□ -1.66
YBX3-206ENST00000536823 FER1L6-AS1Q8NA97 138 aa4.68□□□□□ -1.66
YBX3-206ENST00000536823 NEXN-AS1Q8NBZ9 246 aa4.68□□□□□ -1.66
YBX3-206ENST00000536823 OR2D3Q8NGH3 330 aa4.68□□□□□ -1.66
YBX3-206ENST00000536823 CHCHD7Q9BUK0 85 aa4.68□□□□□ -1.66
YBX3-206ENST00000536823 DAZ3Q9NR90 486 aaKnown RBP4.68□□□□□ -1.66
YBX3-206ENST00000536823 MED9Q9NWA0 146 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms