RNA–Protein interactions for RNA: ENST00000536710.1

PRKDC-208, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 4

Gene PRKDC, Length 554 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-208ENST00000536710 ARL5CA6NH57 179 aa1.26□□□□□ -2.21
PRKDC-208ENST00000536710 LOC730098B7Z3J9 87 aa1.26□□□□□ -2.21
PRKDC-208ENST00000536710 SULT1C4O75897 302 aa1.26□□□□□ -2.21
PRKDC-208ENST00000536710 DR1Q01658 176 aa1.26□□□□□ -2.21
PRKDC-208ENST00000536710 TMEM229BQ8NBD8 167 aa1.26□□□□□ -2.21
PRKDC-208ENST00000536710 OR51A4Q8NGJ6 313 aa1.26□□□□□ -2.21
PRKDC-208ENST00000536710 GINS2Q9Y248 185 aa1.26□□□□□ -2.21
PRKDC-208ENST00000536710 CITO14578 2027 aa1.26□□□□□ -2.21
PRKDC-208ENST00000536710 AKAP13Q12802 2813 aa1.25□□□□□ -2.21
PRKDC-208ENST00000536710 FREM3P0C091 2139 aa1.25□□□□□ -2.21
PRKDC-208ENST00000536710 CELSR3Q9NYQ7 3312 aa1.25□□□□□ -2.21
PRKDC-208ENST00000536710 A0A0J9YY99 117 aa1.25□□□□□ -2.21
PRKDC-208ENST00000536710 SLC25A4P12235 298 aa1.25□□□□□ -2.21
PRKDC-208ENST00000536710 BLCAPP62952 87 aa1.25□□□□□ -2.21
PRKDC-208ENST00000536710 TAC4Q86UU9 113 aa1.25□□□□□ -2.21
PRKDC-208ENST00000536710 SMG1Q96Q15 3661 aaKnown RBP1.25□□□□□ -2.21
PRKDC-208ENST00000536710 ATMQ13315 3056 aa1.25□□□□□ -2.21
PRKDC-208ENST00000536710 BPTFQ12830 3046 aa1.25□□□□□ -2.21
PRKDC-208ENST00000536710 TCHHQ07283 1943 aa1.25□□□□□ -2.21
PRKDC-208ENST00000536710 UNC13CQ8NB66 2214 aa1.24□□□□□ -2.21
PRKDC-208ENST00000536710 USP24Q9UPU5 2620 aa1.24□□□□□ -2.21
PRKDC-208ENST00000536710 GVINP1Q7Z2Y8 2422 aa1.24□□□□□ -2.21
PRKDC-208ENST00000536710 CACNA1HO95180 2353 aa1.24□□□□□ -2.21
PRKDC-208ENST00000536710 ZDBF2Q9HCK1 2354 aa1.24□□□□□ -2.21
PRKDC-208ENST00000536710 NUPR2A6NF83 97 aa1.24□□□□□ -2.21
PRKDC-208ENST00000536710 ZNF727A8MUV8 499 aa1.24□□□□□ -2.21
PRKDC-208ENST00000536710 J3KT08 172 aa1.24□□□□□ -2.21
PRKDC-208ENST00000536710 CD52P31358 61 aa1.24□□□□□ -2.21
PRKDC-208ENST00000536710 RPL22P35268 128 aaKnown RBP1.24□□□□□ -2.21
PRKDC-208ENST00000536710 RPL37AP61513 92 aaKnown RBP1.24□□□□□ -2.21
PRKDC-208ENST00000536710 C3orf62Q6ZUJ4 267 aa1.24□□□□□ -2.21
PRKDC-208ENST00000536710 LPAR5Q9H1C0 372 aa1.24□□□□□ -2.21
PRKDC-208ENST00000536710 SPENQ96T58 3664 aaKnown RBP1.24□□□□□ -2.21
PRKDC-208ENST00000536710 DSPP15924 2871 aaKnown RBP1.24□□□□□ -2.21
PRKDC-208ENST00000536710 CHD6Q8TD26 2715 aa1.24□□□□□ -2.21
PRKDC-208ENST00000536710 BSNQ9UPA5 3926 aa1.23□□□□□ -2.21
PRKDC-208ENST00000536710 SPAG17Q6Q759 2223 aa1.23□□□□□ -2.21
PRKDC-208ENST00000536710 TRBV30A0A0K0K1B3 111 aa1.23□□□□□ -2.21
PRKDC-208ENST00000536710 KALRNO60229 2985 aa1.23□□□□□ -2.21
PRKDC-208ENST00000536710 EDF1O60869 148 aaKnown RBP1.23□□□□□ -2.21
PRKDC-208ENST00000536710 PDE6GP18545 87 aa1.23□□□□□ -2.21
PRKDC-208ENST00000536710 Q6ZQY7 126 aa1.23□□□□□ -2.21
PRKDC-208ENST00000536710 Q86TA4 180 aa1.23□□□□□ -2.21
PRKDC-208ENST00000536710 OR5A2Q8NGI9 324 aa1.23□□□□□ -2.21
PRKDC-208ENST00000536710 MPC1Q9Y5U8 109 aa1.23□□□□□ -2.21
PRKDC-208ENST00000536710 MUC22E2RYF6 1773 aaPredicted RBP1.23□□□□□ -2.21
PRKDC-208ENST00000536710 FAM186AA6NE01 2351 aa1.22□□□□□ -2.21
PRKDC-208ENST00000536710 HMCN1Q96RW7 5635 aa1.22□□□□□ -2.21
PRKDC-208ENST00000536710 BOD1L1Q8NFC6 3051 aa1.22□□□□□ -2.21
PRKDC-208ENST00000536710 TENM4Q6N022 2769 aa1.22□□□□□ -2.21
PRKDC-208ENST00000536710 HBDP02042 147 aa1.22□□□□□ -2.21
PRKDC-208ENST00000536710 NBEAP1P0C6P0 100 aa1.22□□□□□ -2.21
PRKDC-208ENST00000536710 ETV6P41212 452 aa1.22□□□□□ -2.21
PRKDC-208ENST00000536710 GTF2A1P52655 376 aaPredicted RBP1.22□□□□□ -2.21
PRKDC-208ENST00000536710 DNAJB13P59910 316 aa1.22□□□□□ -2.21
PRKDC-208ENST00000536710 IZUMO2Q6UXV1 221 aa1.22□□□□□ -2.21
PRKDC-208ENST00000536710 OR8I2Q8N0Y5 310 aa1.22□□□□□ -2.21
PRKDC-208ENST00000536710 TCTEX1D1Q8N7M0 179 aa1.22□□□□□ -2.21
PRKDC-208ENST00000536710 NAT14Q8WUY8 206 aa1.22□□□□□ -2.21
PRKDC-208ENST00000536710 CEP250Q9BV73 2442 aa1.22□□□□□ -2.21
PRKDC-208ENST00000536710 MGAQ8IWI9 3026 aa1.22□□□□□ -2.21
PRKDC-208ENST00000536710 RIF1Q5UIP0 2472 aaKnown RBP1.22□□□□□ -2.21
PRKDC-208ENST00000536710 EPG5Q9HCE0 2579 aa1.21□□□□□ -2.22
PRKDC-208ENST00000536710 CHD8Q9HCK8 2581 aa1.21□□□□□ -2.22
PRKDC-208ENST00000536710 SNRNP200O75643 2136 aaKnown RBP1.21□□□□□ -2.22
PRKDC-208ENST00000536710 GCN1Q92616 2671 aaKnown RBP1.21□□□□□ -2.22
PRKDC-208ENST00000536710 MAP1BP46821 2468 aaKnown RBP1.21□□□□□ -2.22
PRKDC-208ENST00000536710 A0A1W2PPB8 328 aa1.21□□□□□ -2.22
PRKDC-208ENST00000536710 A0A1W2PRS3 328 aa1.21□□□□□ -2.22
PRKDC-208ENST00000536710 KIR3DP1A8MWS1 328 aa1.21□□□□□ -2.22
PRKDC-208ENST00000536710 SNRPD3P62318 126 aaKnown RBP1.21□□□□□ -2.22
PRKDC-208ENST00000536710 SMIM7Q9BQ49 75 aa1.21□□□□□ -2.22
PRKDC-208ENST00000536710 IGSF10Q6WRI0 2623 aa1.21□□□□□ -2.22
PRKDC-208ENST00000536710 CFAP46Q8IYW2 2715 aa1.21□□□□□ -2.22
PRKDC-208ENST00000536710 COL12A1Q99715 3063 aa1.21□□□□□ -2.22
PRKDC-208ENST00000536710 ASH1LQ9NR48 2969 aaKnown RBP1.2□□□□□ -2.22
PRKDC-208ENST00000536710 PLXNA2O75051 1894 aa1.2□□□□□ -2.22
PRKDC-208ENST00000536710 NCOR2Q9Y618 2525 aa1.2□□□□□ -2.22
PRKDC-208ENST00000536710 DPM2O94777 84 aa1.2□□□□□ -2.22
PRKDC-208ENST00000536710 CKS2P33552 79 aa1.2□□□□□ -2.22
PRKDC-208ENST00000536710 PI4KAP42356 2102 aa1.2□□□□□ -2.22
PRKDC-208ENST00000536710 RPS28P62857 69 aaKnown RBP1.2□□□□□ -2.22
PRKDC-208ENST00000536710 PSPHP78330 225 aa1.2□□□□□ -2.22
PRKDC-208ENST00000536710 AKAP14Q86UN6 197 aa1.2□□□□□ -2.22
PRKDC-208ENST00000536710 RELNP78509 3460 aa1.2□□□□□ -2.22
PRKDC-208ENST00000536710 CEP295Q9C0D2 2601 aa1.2□□□□□ -2.22
PRKDC-208ENST00000536710 EP300Q09472 2414 aaPredicted RBP1.2□□□□□ -2.22
PRKDC-208ENST00000536710 CACNA1EQ15878 2313 aa1.2□□□□□ -2.22
PRKDC-208ENST00000536710 ACACBO00763 2458 aa1.2□□□□□ -2.22
PRKDC-208ENST00000536710 MYO18AQ92614 2054 aaKnown RBP1.19□□□□□ -2.22
PRKDC-208ENST00000536710 F5P12259 2224 aa1.19□□□□□ -2.22
PRKDC-208ENST00000536710 SETXQ7Z333 2677 aaKnown RBP1.19□□□□□ -2.22
PRKDC-208ENST00000536710 C10orf142B7Z368 130 aa1.19□□□□□ -2.22
PRKDC-208ENST00000536710 UQCRQO14949 82 aa1.19□□□□□ -2.22
PRKDC-208ENST00000536710 UBR5O95071 2799 aaPredicted RBP1.19□□□□□ -2.22
PRKDC-208ENST00000536710 CSAG1Q6PB30 78 aa1.19□□□□□ -2.22
PRKDC-208ENST00000536710 PKD1L2Q7Z442 2459 aa1.19□□□□□ -2.22
PRKDC-208ENST00000536710 OR8J3Q8NGG0 315 aa1.19□□□□□ -2.22
PRKDC-208ENST00000536710 TCEAL4Q96EI5 215 aa1.19□□□□□ -2.22
PRKDC-208ENST00000536710 CALML5Q9NZT1 146 aa1.19□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms