RNA–Protein interactions for RNA: ENST00000536404.6

CHRNB1-202, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNB1, Length 1,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-202ENST00000536404 LINC01549A6NIU2 74 aa8.8□□□□□ -1
CHRNB1-202ENST00000536404 SMCPP49901 116 aaPredicted RBP8.8□□□□□ -1
CHRNB1-202ENST00000536404 ORMDL2Q53FV1 153 aa8.8□□□□□ -1
CHRNB1-202ENST00000536404 Q8N6K4 173 aa8.8□□□□□ -1
CHRNB1-202ENST00000536404 Q8TAT8 98 aa8.8□□□□□ -1
CHRNB1-202ENST00000536404 CARD19Q96LW7 228 aa8.8□□□□□ -1
CHRNB1-202ENST00000536404 LENEPQ9Y5L5 61 aa8.8□□□□□ -1
CHRNB1-202ENST00000536404 SMAD5-AS1Q9Y6J3 95 aa8.8□□□□□ -1
CHRNB1-202ENST00000536404 H7C1H1 209 aa8.8□□□□□ -1
CHRNB1-202ENST00000536404 PPP1R17O96001 155 aa8.8□□□□□ -1
CHRNB1-202ENST00000536404 FXYD7P58549 80 aa8.8□□□□□ -1
CHRNB1-202ENST00000536404 IGLV2-18A0A075B6J9 118 aa8.79□□□□□ -1
CHRNB1-202ENST00000536404 MYMXA0A1B0GTQ4 84 aa8.79□□□□□ -1
CHRNB1-202ENST00000536404 RPS28P62857 69 aaKnown RBP8.79□□□□□ -1
CHRNB1-202ENST00000536404 DYNAPQ8N1N2 210 aa8.79□□□□□ -1
CHRNB1-202ENST00000536404 S4R3C0 116 aa8.79□□□□□ -1
CHRNB1-202ENST00000536404 TRBV7-3A0A075B6L6 115 aa8.78□□□□□ -1
CHRNB1-202ENST00000536404 BUB3O43684 328 aa8.78□□□□□ -1
CHRNB1-202ENST00000536404 UBE2D3P61077 147 aa8.78□□□□□ -1
CHRNB1-202ENST00000536404 UBE2D2P62837 147 aa8.78□□□□□ -1
CHRNB1-202ENST00000536404 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.78□□□□□ -1
CHRNB1-202ENST00000536404 GTSCR1Q86UQ5 136 aa8.78□□□□□ -1
CHRNB1-202ENST00000536404 WFDC3Q8IUB2 231 aa8.78□□□□□ -1
CHRNB1-202ENST00000536404 C11orf44Q8N8P7 122 aa8.78□□□□□ -1
CHRNB1-202ENST00000536404 IGKV2D-26A0A0A0MRZ7 120 aa8.77□□□□□ -1.01
CHRNB1-202ENST00000536404 TRBV7-1A0A0A6YYK4 115 aa8.77□□□□□ -1.01
CHRNB1-202ENST00000536404 F8VRH5 84 aa8.77□□□□□ -1.01
CHRNB1-202ENST00000536404 PPIFP30405 207 aaKnown RBP8.77□□□□□ -1.01
CHRNB1-202ENST00000536404 PSMB2P49721 201 aa8.77□□□□□ -1.01
CHRNB1-202ENST00000536404 SPANXN1Q5VSR9 72 aa8.77□□□□□ -1.01
CHRNB1-202ENST00000536404 C9orf47Q6ZRZ4 202 aa8.77□□□□□ -1.01
CHRNB1-202ENST00000536404 MRAPQ8TCY5 172 aa8.77□□□□□ -1.01
CHRNB1-202ENST00000536404 RASL10AQ92737 203 aa8.77□□□□□ -1.01
CHRNB1-202ENST00000536404 EEF1AKMT3Q96AZ1 226 aa8.77□□□□□ -1.01
CHRNB1-202ENST00000536404 METTL26Q96S19 204 aa8.77□□□□□ -1.01
CHRNB1-202ENST00000536404 MSRB1Q9NZV6 116 aa8.77□□□□□ -1.01
CHRNB1-202ENST00000536404 MORN3Q6PF18 240 aaPredicted RBP8.76□□□□□ -1.01
CHRNB1-202ENST00000536404 ZFAND3Q9H8U3 227 aa8.76□□□□□ -1.01
CHRNB1-202ENST00000536404 MRPL35Q9NZE8 188 aaKnown RBP8.76□□□□□ -1.01
CHRNB1-202ENST00000536404 IGHV7-81A0A0B4J1V7 117 aa8.76□□□□□ -1.01
CHRNB1-202ENST00000536404 TRAV8-2A0A0B4J237 113 aa8.76□□□□□ -1.01
CHRNB1-202ENST00000536404 ATP5G1P05496 136 aa8.76□□□□□ -1.01
CHRNB1-202ENST00000536404 MED14OSP0DP75 135 aa8.76□□□□□ -1.01
CHRNB1-202ENST00000536404 ERCC8Q13216 396 aa8.76□□□□□ -1.01
CHRNB1-202ENST00000536404 NRACQ8N912 160 aa8.76□□□□□ -1.01
CHRNB1-202ENST00000536404 LINC01600Q96MT4 127 aa8.76□□□□□ -1.01
CHRNB1-202ENST00000536404 SMIM2Q9BVW6 85 aa8.76□□□□□ -1.01
CHRNB1-202ENST00000536404 DNAH3Q8TD57 4116 aa8.75□□□□□ -1.01
CHRNB1-202ENST00000536404 IGKV3D-20A0A0C4DH25 116 aa8.75□□□□□ -1.01
CHRNB1-202ENST00000536404 M0R381 172 aa8.75□□□□□ -1.01
CHRNB1-202ENST00000536404 NDPQ00604 133 aa8.75□□□□□ -1.01
CHRNB1-202ENST00000536404 C15orf32Q32M92 178 aa8.75□□□□□ -1.01
CHRNB1-202ENST00000536404 PAPPA-AS1Q5QFB9 102 aa8.75□□□□□ -1.01
CHRNB1-202ENST00000536404 ZNF575Q86XF7 245 aa8.75□□□□□ -1.01
CHRNB1-202ENST00000536404 ANKRD29Q8N6D5 301 aa8.75□□□□□ -1.01
CHRNB1-202ENST00000536404 AGPAT4-IT1Q9H0P7 198 aa8.75□□□□□ -1.01
CHRNB1-202ENST00000536404 A6NDX4 124 aa8.74□□□□□ -1.01
CHRNB1-202ENST00000536404 DUSP14O95147 198 aaKnown RBP8.74□□□□□ -1.01
CHRNB1-202ENST00000536404 IGHV3-23P01764 117 aa8.74□□□□□ -1.01
CHRNB1-202ENST00000536404 HLA-DMBP28068 263 aa8.74□□□□□ -1.01
CHRNB1-202ENST00000536404 TMEM219Q86XT9 240 aa8.74□□□□□ -1.01
CHRNB1-202ENST00000536404 Q8N9W7 124 aa8.74□□□□□ -1.01
CHRNB1-202ENST00000536404 LINC00477Q96M19 166 aa8.74□□□□□ -1.01
CHRNB1-202ENST00000536404 LINC01587Q99440 93 aa8.74□□□□□ -1.01
CHRNB1-202ENST00000536404 KIR2DL4Q99706 377 aa8.74□□□□□ -1.01
CHRNB1-202ENST00000536404 ZNF702PQ9H963 129 aa8.74□□□□□ -1.01
CHRNB1-202ENST00000536404 NOTCH3Q9UM47 2321 aa8.74□□□□□ -1.01
CHRNB1-202ENST00000536404 TRAV8-4A0A0B4J246 113 aa8.73□□□□□ -1.01
CHRNB1-202ENST00000536404 TRAV4A0A0B4J268 109 aa8.73□□□□□ -1.01
CHRNB1-202ENST00000536404 LOC107984156A0A0G2JMH3 177 aa8.73□□□□□ -1.01
CHRNB1-202ENST00000536404 IGHV7-4-1A0A0J9YVY3 117 aa8.73□□□□□ -1.01
CHRNB1-202ENST00000536404 IGFL4Q6B9Z1 124 aa8.73□□□□□ -1.01
CHRNB1-202ENST00000536404 ARL17AQ8IVW1 177 aa8.73□□□□□ -1.01
CHRNB1-202ENST00000536404 TOMM6Q96B49 74 aa8.73□□□□□ -1.01
CHRNB1-202ENST00000536404 SCGB3A1Q96QR1 104 aa8.73□□□□□ -1.01
CHRNB1-202ENST00000536404 IMUPQ9GZP8 106 aa8.73□□□□□ -1.01
CHRNB1-202ENST00000536404 PLXNB1O43157 2135 aa8.73□□□□□ -1.01
CHRNB1-202ENST00000536404 PRAC2D3DTV9 90 aa8.72□□□□□ -1.01
CHRNB1-202ENST00000536404 OVOL1O14753 267 aa8.72□□□□□ -1.01
CHRNB1-202ENST00000536404 CD28P10747 220 aa8.72□□□□□ -1.01
CHRNB1-202ENST00000536404 UBE2D1P51668 147 aa8.72□□□□□ -1.01
CHRNB1-202ENST00000536404 Q6ZS46 218 aa8.72□□□□□ -1.01
CHRNB1-202ENST00000536404 DPH3P1Q9H4G8 78 aa8.72□□□□□ -1.01
CHRNB1-202ENST00000536404 U3KQE9 123 aa8.72□□□□□ -1.01
CHRNB1-202ENST00000536404 TRAV21A0A0B4J279 112 aa8.72□□□□□ -1.01
CHRNB1-202ENST00000536404 FAM240AA0A1B0GVK7 77 aa8.72□□□□□ -1.01
CHRNB1-202ENST00000536404 C9JAW5 83 aa8.72□□□□□ -1.01
CHRNB1-202ENST00000536404 RPL13AP40429 203 aaKnown RBP8.72□□□□□ -1.01
CHRNB1-202ENST00000536404 HERVK_113P61574 105 aa8.72□□□□□ -1.01
CHRNB1-202ENST00000536404 SUMO2P61956 95 aaKnown RBP8.72□□□□□ -1.01
CHRNB1-202ENST00000536404 NSUN5P1Q3KNT7 163 aa8.72□□□□□ -1.01
CHRNB1-202ENST00000536404 Q8N2B8 174 aa8.72□□□□□ -1.01
CHRNB1-202ENST00000536404 TRBV7-7A0A0K0K1E9 115 aa8.71□□□□□ -1.02
CHRNB1-202ENST00000536404 FAM223BA6NKX1 122 aa8.71□□□□□ -1.02
CHRNB1-202ENST00000536404 M0R2P5 195 aa8.71□□□□□ -1.02
CHRNB1-202ENST00000536404 PRB2P02812 416 aaPredicted RBP8.71□□□□□ -1.02
CHRNB1-202ENST00000536404 TRGV3P03979 118 aa8.71□□□□□ -1.02
CHRNB1-202ENST00000536404 GATA1P15976 413 aaPredicted RBP8.71□□□□□ -1.02
CHRNB1-202ENST00000536404 BLCAPP62952 87 aa8.71□□□□□ -1.02
CHRNB1-202ENST00000536404 BEAN1Q3B7T3 259 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms