RNA–Protein interactions for RNA: ENST00000536337.5

PTPN21-202, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

TSL 1 (best)

Gene PTPN21, Length 3,943 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-202ENST00000536337 FAM231CP0DMU5 169 aa9.76□□□□□ -0.85
PTPN21-202ENST00000536337 TOMM6Q96B49 74 aa9.76□□□□□ -0.85
PTPN21-202ENST00000536337 PEMTQ9UBM1 199 aa9.76□□□□□ -0.85
PTPN21-202ENST00000536337 HIGD1BQ9P298 99 aa9.76□□□□□ -0.85
PTPN21-202ENST00000536337 FASNP49327 2511 aaKnown RBP9.76□□□□□ -0.85
PTPN21-202ENST00000536337 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.75□□□□□ -0.85
PTPN21-202ENST00000536337 IGKV2-29A2NJV5 120 aaPredicted RBP9.75□□□□□ -0.85
PTPN21-202ENST00000536337 TMEM262E9PQX1 116 aa9.75□□□□□ -0.85
PTPN21-202ENST00000536337 RPL35AP18077 110 aaKnown RBP9.75□□□□□ -0.85
PTPN21-202ENST00000536337 IGHV4OR15-8A0A075B7B6 117 aa9.75□□□□□ -0.85
PTPN21-202ENST00000536337 A0A087WW49 117 aa9.75□□□□□ -0.85
PTPN21-202ENST00000536337 PRO1854Q9UHT4 67 aa9.75□□□□□ -0.85
PTPN21-202ENST00000536337 SPINK8P0C7L1 97 aa9.74□□□□□ -0.85
PTPN21-202ENST00000536337 TAL2Q16559 108 aa9.74□□□□□ -0.85
PTPN21-202ENST00000536337 TMEM141Q96I45 108 aa9.74□□□□□ -0.85
PTPN21-202ENST00000536337 G3V4G9 280 aa9.74□□□□□ -0.85
PTPN21-202ENST00000536337 TTC32Q5I0X7 151 aa9.73□□□□□ -0.85
PTPN21-202ENST00000536337 OR13C6PQ8NH95 151 aa9.73□□□□□ -0.85
PTPN21-202ENST00000536337 ZNRF2Q8NHG8 242 aa9.73□□□□□ -0.85
PTPN21-202ENST00000536337 A4D1N5 150 aa9.73□□□□□ -0.85
PTPN21-202ENST00000536337 E9PLD3 99 aa9.73□□□□□ -0.85
PTPN21-202ENST00000536337 M0R2P5 195 aa9.73□□□□□ -0.85
PTPN21-202ENST00000536337 SNCGO76070 127 aa9.73□□□□□ -0.85
PTPN21-202ENST00000536337 SRSF2Q01130 221 aaKnown RBP9.73□□□□□ -0.85
PTPN21-202ENST00000536337 AVPP01185 164 aa9.72□□□□□ -0.85
PTPN21-202ENST00000536337 RNASE3P12724 160 aaKnown RBP9.72□□□□□ -0.85
PTPN21-202ENST00000536337 ZNF415Q09FC8 603 aa9.72□□□□□ -0.85
PTPN21-202ENST00000536337 A6NDX4 124 aa9.72□□□□□ -0.85
PTPN21-202ENST00000536337 DAND5Q8N907 189 aa9.72□□□□□ -0.85
PTPN21-202ENST00000536337 C11orf68Q9H3H3 251 aaKnown RBP9.72□□□□□ -0.85
PTPN21-202ENST00000536337 NDUFA12Q9UI09 145 aa9.72□□□□□ -0.85
PTPN21-202ENST00000536337 RNASE1P07998 156 aaKnown RBP9.72□□□□□ -0.85
PTPN21-202ENST00000536337 NEXN-AS1Q8NBZ9 246 aa9.71□□□□□ -0.85
PTPN21-202ENST00000536337 TRAV8-3A0A0A6YYJ7 113 aa9.71□□□□□ -0.86
PTPN21-202ENST00000536337 TRAV12-1A0A0B4J245 112 aa9.71□□□□□ -0.86
PTPN21-202ENST00000536337 CKS1BP61024 79 aa9.71□□□□□ -0.86
PTPN21-202ENST00000536337 CNFNQ9BYD5 112 aa9.71□□□□□ -0.86
PTPN21-202ENST00000536337 GAGE12JA6NER3 117 aa9.71□□□□□ -0.86
PTPN21-202ENST00000536337 PROK1P58294 105 aa9.71□□□□□ -0.86
PTPN21-202ENST00000536337 GAGE4Q13068 117 aa9.71□□□□□ -0.86
PTPN21-202ENST00000536337 GAGE5Q13069 117 aa9.71□□□□□ -0.86
PTPN21-202ENST00000536337 NSUN5P1Q3KNT7 163 aa9.7□□□□□ -0.86
PTPN21-202ENST00000536337 H3BUA1 57 aa9.7□□□□□ -0.86
PTPN21-202ENST00000536337 TM2D2Q9BX73 214 aa9.7□□□□□ -0.86
PTPN21-202ENST00000536337 DSCR9P59020 149 aa9.7□□□□□ -0.86
PTPN21-202ENST00000536337 MUSTN1Q8IVN3 82 aa9.7□□□□□ -0.86
PTPN21-202ENST00000536337 ATP6V0BQ99437 205 aa9.7□□□□□ -0.86
PTPN21-202ENST00000536337 YAE1D1Q9NRH1 226 aa9.7□□□□□ -0.86
PTPN21-202ENST00000536337 TRGV4A0A0C4DH28 118 aa9.69□□□□□ -0.86
PTPN21-202ENST00000536337 C2orf82Q6UX34 121 aa9.69□□□□□ -0.86
PTPN21-202ENST00000536337 Q96MF0 132 aa9.69□□□□□ -0.86
PTPN21-202ENST00000536337 SPAG8Q99932 426 aaPredicted RBP9.69□□□□□ -0.86
PTPN21-202ENST00000536337 A0A0J9YX75 114 aa9.69□□□□□ -0.86
PTPN21-202ENST00000536337 SMG1Q96Q15 3661 aaKnown RBP9.69□□□□□ -0.86
PTPN21-202ENST00000536337 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.69□□□□□ -0.86
PTPN21-202ENST00000536337 TMEM101Q96IK0 257 aa9.69□□□□□ -0.86
PTPN21-202ENST00000536337 CHCHD5Q9BSY4 110 aa9.69□□□□□ -0.86
PTPN21-202ENST00000536337 PRIMA1Q86XR5 153 aa9.68□□□□□ -0.86
PTPN21-202ENST00000536337 VPREB3Q9UKI3 123 aa9.68□□□□□ -0.86
PTPN21-202ENST00000536337 INSP01308 110 aa9.68□□□□□ -0.86
PTPN21-202ENST00000536337 TEX29Q8N6K0 151 aa9.68□□□□□ -0.86
PTPN21-202ENST00000536337 INSL3P51460 131 aa9.68□□□□□ -0.86
PTPN21-202ENST00000536337 RPL36AP83881 106 aaKnown RBP9.68□□□□□ -0.86
PTPN21-202ENST00000536337 GPHB5Q86YW7 130 aa9.68□□□□□ -0.86
PTPN21-202ENST00000536337 TMEM61Q8N0U2 210 aa9.68□□□□□ -0.86
PTPN21-202ENST00000536337 RPL36ALQ969Q0 106 aaKnown RBP9.68□□□□□ -0.86
PTPN21-202ENST00000536337 LINC01619G3V211 115 aa9.67□□□□□ -0.86
PTPN21-202ENST00000536337 GATA3P23771 443 aa9.67□□□□□ -0.86
PTPN21-202ENST00000536337 U3KQE9 123 aa9.67□□□□□ -0.86
PTPN21-202ENST00000536337 SLC25A20O43772 301 aa9.67□□□□□ -0.86
PTPN21-202ENST00000536337 DEFB130BP0DP73 79 aa9.67□□□□□ -0.86
PTPN21-202ENST00000536337 DEFB130AP0DP74 79 aa9.67□□□□□ -0.86
PTPN21-202ENST00000536337 NTN5Q8WTR8 489 aaPredicted RBP9.67□□□□□ -0.86
PTPN21-202ENST00000536337 CFC1BP0CG36 223 aa9.66□□□□□ -0.86
PTPN21-202ENST00000536337 CFC1P0CG37 223 aa9.66□□□□□ -0.86
PTPN21-202ENST00000536337 PIFOQ8TCI5 191 aa9.66□□□□□ -0.86
PTPN21-202ENST00000536337 CLUHP3Q96NS8 147 aa9.66□□□□□ -0.86
PTPN21-202ENST00000536337 ANAPC13Q9BS18 74 aa9.66□□□□□ -0.86
PTPN21-202ENST00000536337 FLNCQ14315 2725 aa9.66□□□□□ -0.86
PTPN21-202ENST00000536337 GAGE7O76087 117 aa9.66□□□□□ -0.86
PTPN21-202ENST00000536337 ELANEP08246 267 aa9.66□□□□□ -0.86
PTPN21-202ENST00000536337 GAGE12FP0CL80 117 aa9.66□□□□□ -0.86
PTPN21-202ENST00000536337 GAGE12GP0CL81 117 aa9.66□□□□□ -0.86
PTPN21-202ENST00000536337 GAGE12IP0CL82 117 aa9.66□□□□□ -0.86
PTPN21-202ENST00000536337 A8MZ25 164 aa9.65□□□□□ -0.86
PTPN21-202ENST00000536337 PPDPFLQ8WWR9 84 aa9.65□□□□□ -0.86
PTPN21-202ENST00000536337 TRBV20-1A0A075B6N2 111 aa9.65□□□□□ -0.86
PTPN21-202ENST00000536337 TRBV7-9A0A0J9YWB2 115 aa9.65□□□□□ -0.86
PTPN21-202ENST00000536337 K7EMT4 169 aa9.65□□□□□ -0.86
PTPN21-202ENST00000536337 TSPAN13O95857 204 aa9.65□□□□□ -0.86
PTPN21-202ENST00000536337 HTN3P15516 51 aa9.65□□□□□ -0.86
PTPN21-202ENST00000536337 LINC00158P58513 81 aa9.65□□□□□ -0.86
PTPN21-202ENST00000536337 ATXN8Q156A1 80 aa9.65□□□□□ -0.86
PTPN21-202ENST00000536337 UFSP1Q6NVU6 142 aa9.65□□□□□ -0.86
PTPN21-202ENST00000536337 C10orf126Q8N4M7 172 aa9.65□□□□□ -0.86
PTPN21-202ENST00000536337 C20orf203Q8NBC4 194 aa9.65□□□□□ -0.86
PTPN21-202ENST00000536337 IGLV2-18A0A075B6J9 118 aa9.64□□□□□ -0.87
PTPN21-202ENST00000536337 GAGE2BQ13066 116 aa9.64□□□□□ -0.87
PTPN21-202ENST00000536337 GAGE2EQ4V326 116 aa9.64□□□□□ -0.87
PTPN21-202ENST00000536337 C18orf65Q6ZTR6 163 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms