RNA–Protein interactions for RNA: ENST00000536239.1

SKA3-207, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-207ENST00000536239 C11orf45Q8TAV5 145 aa1.78□□□□□ -2.12
SKA3-207ENST00000536239 WFDC5Q8TCV5 224 aa1.78□□□□□ -2.12
SKA3-207ENST00000536239 FXYD5Q96DB9 178 aa1.78□□□□□ -2.12
SKA3-207ENST00000536239 PROK2Q9HC23 129 aa1.78□□□□□ -2.12
SKA3-207ENST00000536239 ICOSQ9Y6W8 199 aa1.78□□□□□ -2.12
SKA3-207ENST00000536239 KIF25-AS1Q9Y6Z4 181 aa1.78□□□□□ -2.12
SKA3-207ENST00000536239 TET2Q6N021 2002 aaPredicted RBP1.78□□□□□ -2.13
SKA3-207ENST00000536239 CABIN1Q9Y6J0 2220 aa1.77□□□□□ -2.13
SKA3-207ENST00000536239 IGLV2-18A0A075B6J9 118 aa1.77□□□□□ -2.13
SKA3-207ENST00000536239 IGKV1D-43A0A0B4J1Z2 117 aa1.77□□□□□ -2.13
SKA3-207ENST00000536239 TMEM30CPA0ZSE6 113 aa1.77□□□□□ -2.13
SKA3-207ENST00000536239 SDHAF1A6NFY7 115 aa1.77□□□□□ -2.13
SKA3-207ENST00000536239 C11orf86A6NJI1 115 aa1.77□□□□□ -2.13
SKA3-207ENST00000536239 FAM223BA6NKX1 122 aa1.77□□□□□ -2.13
SKA3-207ENST00000536239 K7EMT4 169 aa1.77□□□□□ -2.13
SKA3-207ENST00000536239 UBE2L6O14933 153 aa1.77□□□□□ -2.13
SKA3-207ENST00000536239 FXYD7P58549 80 aa1.77□□□□□ -2.13
SKA3-207ENST00000536239 IGLV3-21P80748 117 aaPredicted RBP1.77□□□□□ -2.13
SKA3-207ENST00000536239 SS18Q15532 418 aa1.77□□□□□ -2.13
SKA3-207ENST00000536239 Q1T7F1 81 aa1.77□□□□□ -2.13
SKA3-207ENST00000536239 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.77□□□□□ -2.13
SKA3-207ENST00000536239 C10orf113Q5VZT2 155 aa1.77□□□□□ -2.13
SKA3-207ENST00000536239 PHF5AQ7RTV0 110 aaKnown RBP1.77□□□□□ -2.13
SKA3-207ENST00000536239 VN1R4Q7Z5H5 301 aa1.77□□□□□ -2.13
SKA3-207ENST00000536239 Q86TA4 180 aa1.77□□□□□ -2.13
SKA3-207ENST00000536239 FAM223AQ8IWN6 122 aa1.77□□□□□ -2.13
SKA3-207ENST00000536239 Q8IYB0 196 aa1.77□□□□□ -2.13
SKA3-207ENST00000536239 C20orf197Q8N268 126 aa1.77□□□□□ -2.13
SKA3-207ENST00000536239 Q8N2B8 174 aa1.77□□□□□ -2.13
SKA3-207ENST00000536239 C6orf223Q8N319 242 aa1.77□□□□□ -2.13
SKA3-207ENST00000536239 FAM216BQ8N7L0 139 aa1.77□□□□□ -2.13
SKA3-207ENST00000536239 DYNLRB2Q8TF09 96 aa1.77□□□□□ -2.13
SKA3-207ENST00000536239 RNASE6Q93091 150 aaKnown RBP1.77□□□□□ -2.13
SKA3-207ENST00000536239 EEF1AKMT3Q96AZ1 226 aa1.77□□□□□ -2.13
SKA3-207ENST00000536239 CNFNQ9BYD5 112 aa1.77□□□□□ -2.13
SKA3-207ENST00000536239 Q9H3A6 140 aa1.77□□□□□ -2.13
SKA3-207ENST00000536239 PHPT1Q9NRX4 125 aaPredicted RBP1.77□□□□□ -2.13
SKA3-207ENST00000536239 UBE2D4Q9Y2X8 147 aa1.77□□□□□ -2.13
SKA3-207ENST00000536239 FER1L5A0AVI2 2057 aa1.77□□□□□ -2.13
SKA3-207ENST00000536239 COL4A6Q14031 1691 aa1.77□□□□□ -2.13
SKA3-207ENST00000536239 IGHV1OR21-1A0A087WYE8 117 aa1.76□□□□□ -2.13
SKA3-207ENST00000536239 IGLV3-32A0A0A0MS00 114 aa1.76□□□□□ -2.13
SKA3-207ENST00000536239 TRAV8-3A0A0A6YYJ7 113 aa1.76□□□□□ -2.13
SKA3-207ENST00000536239 IGHV1OR15-9A0A0B4J2B8 117 aa1.76□□□□□ -2.13
SKA3-207ENST00000536239 C17orf98A8MV24 154 aa1.76□□□□□ -2.13
SKA3-207ENST00000536239 C8orf87E5RJ46 101 aa1.76□□□□□ -2.13
SKA3-207ENST00000536239 SMKR1H3BMG3 65 aa1.76□□□□□ -2.13
SKA3-207ENST00000536239 M0R378 163 aa1.76□□□□□ -2.13
SKA3-207ENST00000536239 LEPROTO15243 131 aa1.76□□□□□ -2.13
SKA3-207ENST00000536239 CDK2AP2O75956 126 aa1.76□□□□□ -2.13
SKA3-207ENST00000536239 FSTL3O95633 263 aa1.76□□□□□ -2.13
SKA3-207ENST00000536239 LYZP61626 148 aa1.76□□□□□ -2.13
SKA3-207ENST00000536239 BLCAPP62952 87 aa1.76□□□□□ -2.13
SKA3-207ENST00000536239 ECSCRQ19T08 205 aa1.76□□□□□ -2.13
SKA3-207ENST00000536239 DEFB134Q4QY38 66 aa1.76□□□□□ -2.13
SKA3-207ENST00000536239 C2orf83Q53S99 150 aa1.76□□□□□ -2.13
SKA3-207ENST00000536239 CLLU1OSQ5K130 101 aa1.76□□□□□ -2.13
SKA3-207ENST00000536239 C10orf128Q5T292 105 aa1.76□□□□□ -2.13
SKA3-207ENST00000536239 LYZL1Q6UWQ5 148 aa1.76□□□□□ -2.13
SKA3-207ENST00000536239 C16orf47Q6ZP98 133 aaPredicted RBP1.76□□□□□ -2.13
SKA3-207ENST00000536239 COX8CQ7Z4L0 72 aa1.76□□□□□ -2.13
SKA3-207ENST00000536239 MUSTN1Q8IVN3 82 aa1.76□□□□□ -2.13
SKA3-207ENST00000536239 LYPD1Q8N2G4 141 aa1.76□□□□□ -2.13
SKA3-207ENST00000536239 ZNF491Q8N8L2 437 aa1.76□□□□□ -2.13
SKA3-207ENST00000536239 KLHL30-AS1Q8NEE0 82 aa1.76□□□□□ -2.13
SKA3-207ENST00000536239 TOMM6Q96B49 74 aa1.76□□□□□ -2.13
SKA3-207ENST00000536239 COX14Q96I36 57 aa1.76□□□□□ -2.13
SKA3-207ENST00000536239 SCGB3A1Q96QR1 104 aa1.76□□□□□ -2.13
SKA3-207ENST00000536239 ARRDC1-AS1Q9H2J1 176 aa1.76□□□□□ -2.13
SKA3-207ENST00000536239 C11orf68Q9H3H3 251 aaKnown RBP1.76□□□□□ -2.13
SKA3-207ENST00000536239 LINC00474Q9P2X8 69 aa1.76□□□□□ -2.13
SKA3-207ENST00000536239 POLEQ07864 2286 aa1.76□□□□□ -2.13
SKA3-207ENST00000536239 SPAG17Q6Q759 2223 aa1.76□□□□□ -2.13
SKA3-207ENST00000536239 COL4A5P29400 1685 aa1.76□□□□□ -2.13
SKA3-207ENST00000536239 NACAE9PAV3 2078 aa1.76□□□□□ -2.13
SKA3-207ENST00000536239 ALPK2Q86TB3 2170 aa1.75□□□□□ -2.13
SKA3-207ENST00000536239 INTS1Q8N201 2190 aaKnown RBP1.75□□□□□ -2.13
SKA3-207ENST00000536239 MUC22E2RYF6 1773 aaPredicted RBP1.75□□□□□ -2.13
SKA3-207ENST00000536239 IGKV1OR2-108A0A075B7D4 117 aa1.75□□□□□ -2.13
SKA3-207ENST00000536239 IGHV1-69DA0A0B4J2H0 117 aa1.75□□□□□ -2.13
SKA3-207ENST00000536239 F8WEM9 126 aa1.75□□□□□ -2.13
SKA3-207ENST00000536239 H7C2G1 150 aa1.75□□□□□ -2.13
SKA3-207ENST00000536239 I3L3M4 83 aa1.75□□□□□ -2.13
SKA3-207ENST00000536239 M0R3E3 92 aa1.75□□□□□ -2.13
SKA3-207ENST00000536239 ERC2-IT1O76042 136 aa1.75□□□□□ -2.13
SKA3-207ENST00000536239 PPP1R17O96001 155 aa1.75□□□□□ -2.13
SKA3-207ENST00000536239 DNAL4O96015 105 aa1.75□□□□□ -2.13
SKA3-207ENST00000536239 STATHP02808 62 aa1.75□□□□□ -2.13
SKA3-207ENST00000536239 BAALC-AS2P0C853 105 aa1.75□□□□□ -2.13
SKA3-207ENST00000536239 IGHV4-31P0DP07 118 aa1.75□□□□□ -2.13
SKA3-207ENST00000536239 UBE2BP63146 152 aa1.75□□□□□ -2.13
SKA3-207ENST00000536239 NDPQ00604 133 aa1.75□□□□□ -2.13
SKA3-207ENST00000536239 CIRBPQ14011 172 aaKnown RBP1.75□□□□□ -2.13
SKA3-207ENST00000536239 ESRGQ1W209 222 aa1.75□□□□□ -2.13
SKA3-207ENST00000536239 SPINK9Q5DT21 86 aa1.75□□□□□ -2.13
SKA3-207ENST00000536239 FAM27BQ5VT28 67 aa1.75□□□□□ -2.13
SKA3-207ENST00000536239 UNQ9165/PRO28630Q6UXU0 137 aa1.75□□□□□ -2.13
SKA3-207ENST00000536239 Q6ZVQ6 151 aa1.75□□□□□ -2.13
SKA3-207ENST00000536239 VMO1Q7Z5L0 202 aa1.75□□□□□ -2.13
SKA3-207ENST00000536239 PRNTQ86SH4 94 aa1.75□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms