RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 CLRN3Q8NCR9 226 aa7.28□□□□□ -1.24
CLSTN3-206ENST00000535668 FAM213BQ8TBF2 198 aa7.28□□□□□ -1.24
CLSTN3-206ENST00000535668 JPT2Q9H910 190 aa7.28□□□□□ -1.24
CLSTN3-206ENST00000535668 URGCP-MRPS24S4R325 110 aa7.28□□□□□ -1.24
CLSTN3-206ENST00000535668 CTXND1A0A1B0GTU2 59 aa7.27□□□□□ -1.25
CLSTN3-206ENST00000535668 FAM74A7A6NL05 159 aa7.27□□□□□ -1.25
CLSTN3-206ENST00000535668 PKIAP61925 76 aa7.27□□□□□ -1.25
CLSTN3-206ENST00000535668 ZNF726P1Q15940 193 aa7.27□□□□□ -1.25
CLSTN3-206ENST00000535668 FAM162BQ5T6X4 162 aa7.27□□□□□ -1.25
CLSTN3-206ENST00000535668 C15orf54Q8N8G6 183 aa7.27□□□□□ -1.25
CLSTN3-206ENST00000535668 SSBP4Q9BWG4 385 aaPredicted RBP7.27□□□□□ -1.25
CLSTN3-206ENST00000535668 MANBALQ9NQG1 85 aa7.27□□□□□ -1.25
CLSTN3-206ENST00000535668 PRR34Q9NV39 138 aa7.27□□□□□ -1.25
CLSTN3-206ENST00000535668 VAX2Q9UIW0 290 aa7.27□□□□□ -1.25
CLSTN3-206ENST00000535668 PKHD1L1Q86WI1 4243 aa7.27□□□□□ -1.25
CLSTN3-206ENST00000535668 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.26□□□□□ -1.25
CLSTN3-206ENST00000535668 TRBV6-8A0A0A6YYG3 113 aa7.26□□□□□ -1.25
CLSTN3-206ENST00000535668 PEX7O00628 323 aa7.26□□□□□ -1.25
CLSTN3-206ENST00000535668 LECT2O14960 151 aa7.26□□□□□ -1.25
CLSTN3-206ENST00000535668 LTAP01374 205 aa7.26□□□□□ -1.25
CLSTN3-206ENST00000535668 CIRBPQ14011 172 aaKnown RBP7.26□□□□□ -1.25
CLSTN3-206ENST00000535668 ENHOQ6UWT2 76 aa7.26□□□□□ -1.25
CLSTN3-206ENST00000535668 C9orf163Q8N9P6 203 aa7.26□□□□□ -1.25
CLSTN3-206ENST00000535668 SFT2D1Q8WV19 159 aa7.26□□□□□ -1.25
CLSTN3-206ENST00000535668 ZC2HC1AQ96GY0 325 aa7.26□□□□□ -1.25
CLSTN3-206ENST00000535668 FMC1Q96HJ9 113 aa7.26□□□□□ -1.25
CLSTN3-206ENST00000535668 TMEM242Q9NWH2 141 aa7.26□□□□□ -1.25
CLSTN3-206ENST00000535668 KLK12Q9UKR0 248 aa7.26□□□□□ -1.25
CLSTN3-206ENST00000535668 IGKV2D-24A0A075B6R9 120 aa7.25□□□□□ -1.25
CLSTN3-206ENST00000535668 A0A087WX48 190 aa7.25□□□□□ -1.25
CLSTN3-206ENST00000535668 TMEM250H0YL14 139 aa7.25□□□□□ -1.25
CLSTN3-206ENST00000535668 H3BVH4 76 aa7.25□□□□□ -1.25
CLSTN3-206ENST00000535668 RAB4BP61018 213 aa7.25□□□□□ -1.25
CLSTN3-206ENST00000535668 RPL36AP83881 106 aaKnown RBP7.25□□□□□ -1.25
CLSTN3-206ENST00000535668 MIAQ16674 131 aa7.25□□□□□ -1.25
CLSTN3-206ENST00000535668 KRTAP26-1Q6PEX3 210 aa7.25□□□□□ -1.25
CLSTN3-206ENST00000535668 ZFP82Q8N141 532 aa7.25□□□□□ -1.25
CLSTN3-206ENST00000535668 RPL36ALQ969Q0 106 aaKnown RBP7.25□□□□□ -1.25
CLSTN3-206ENST00000535668 DNAJC30Q96LL9 226 aa7.25□□□□□ -1.25
CLSTN3-206ENST00000535668 PHLDA3Q9Y5J5 127 aa7.25□□□□□ -1.25
CLSTN3-206ENST00000535668 TRAV34A0A0B4J273 112 aa7.24□□□□□ -1.25
CLSTN3-206ENST00000535668 SH2D1AO60880 128 aa7.24□□□□□ -1.25
CLSTN3-206ENST00000535668 MT-ND4LP03901 98 aa7.24□□□□□ -1.25
CLSTN3-206ENST00000535668 ADCYAP1P18509 176 aa7.24□□□□□ -1.25
CLSTN3-206ENST00000535668 LINC01620Q4KN68 170 aa7.24□□□□□ -1.25
CLSTN3-206ENST00000535668 TMEM97Q5BJF2 176 aa7.24□□□□□ -1.25
CLSTN3-206ENST00000535668 UBE2WQ96B02 151 aa7.24□□□□□ -1.25
CLSTN3-206ENST00000535668 BTF3L4Q96K17 158 aa7.24□□□□□ -1.25
CLSTN3-206ENST00000535668 MLST8Q9BVC4 326 aa7.24□□□□□ -1.25
CLSTN3-206ENST00000535668 SNAI2O43623 268 aa7.23□□□□□ -1.25
CLSTN3-206ENST00000535668 OR5AL1P0C617 328 aa7.23□□□□□ -1.25
CLSTN3-206ENST00000535668 BCL2P10415 239 aa7.23□□□□□ -1.25
CLSTN3-206ENST00000535668 RPL19P84098 196 aaKnown RBP7.23□□□□□ -1.25
CLSTN3-206ENST00000535668 C1orf43Q9BWL3 253 aa7.23□□□□□ -1.25
CLSTN3-206ENST00000535668 CTDSP1Q9GZU7 261 aa7.23□□□□□ -1.25
CLSTN3-206ENST00000535668 MAP1LC3B2A6NCE7 125 aa7.22□□□□□ -1.25
CLSTN3-206ENST00000535668 PDE6DO43924 150 aa7.22□□□□□ -1.25
CLSTN3-206ENST00000535668 S100A9P06702 114 aaKnown RBP7.22□□□□□ -1.25
CLSTN3-206ENST00000535668 SRP19P09132 144 aaKnown RBP7.22□□□□□ -1.25
CLSTN3-206ENST00000535668 CNBPP62633 177 aaKnown RBP7.22□□□□□ -1.25
CLSTN3-206ENST00000535668 KCNIP4Q6PIL6 250 aa7.22□□□□□ -1.25
CLSTN3-206ENST00000535668 SDIM1Q6ZPB5 146 aa7.22□□□□□ -1.25
CLSTN3-206ENST00000535668 DAZAP1Q96EP5 407 aaKnown RBP7.22□□□□□ -1.25
CLSTN3-206ENST00000535668 MAP1LC3BQ9GZQ8 125 aa7.22□□□□□ -1.25
CLSTN3-206ENST00000535668 A0A087WWL8 130 aa7.21□□□□□ -1.26
CLSTN3-206ENST00000535668 SCO1O75880 301 aa7.21□□□□□ -1.26
CLSTN3-206ENST00000535668 MT1HL1P0DM35 61 aa7.21□□□□□ -1.26
CLSTN3-206ENST00000535668 SRSF3P84103 164 aaKnown RBP7.21□□□□□ -1.26
CLSTN3-206ENST00000535668 Q6ZRU5 148 aa7.21□□□□□ -1.26
CLSTN3-206ENST00000535668 NEXN-AS1Q8NBZ9 246 aa7.21□□□□□ -1.26
CLSTN3-206ENST00000535668 PLA2G2DQ9UNK4 145 aa7.21□□□□□ -1.26
CLSTN3-206ENST00000535668 KIF25-AS1Q9Y6Z4 181 aa7.21□□□□□ -1.26
CLSTN3-206ENST00000535668 C7orf77A4D0Y5 90 aa7.2□□□□□ -1.26
CLSTN3-206ENST00000535668 USP17L23D6RBM5 183 aa7.2□□□□□ -1.26
CLSTN3-206ENST00000535668 PRSS1P07477 247 aa7.2□□□□□ -1.26
CLSTN3-206ENST00000535668 MEF2BQ02080 365 aaPredicted RBP7.2□□□□□ -1.26
CLSTN3-206ENST00000535668 IQCJQ1A5X6 159 aa7.2□□□□□ -1.26
CLSTN3-206ENST00000535668 MPV17L2Q567V2 206 aa7.2□□□□□ -1.26
CLSTN3-206ENST00000535668 FAM74A4Q5TZK3 123 aa7.2□□□□□ -1.26
CLSTN3-206ENST00000535668 NTM-AS1Q6ZSK4 140 aa7.2□□□□□ -1.26
CLSTN3-206ENST00000535668 RNF185Q96GF1 192 aa7.2□□□□□ -1.26
CLSTN3-206ENST00000535668 A0A1B0GUV1 79 aa7.19□□□□□ -1.26
CLSTN3-206ENST00000535668 GRIFINA4D1Z8 144 aa7.19□□□□□ -1.26
CLSTN3-206ENST00000535668 C9JQL5 133 aa7.19□□□□□ -1.26
CLSTN3-206ENST00000535668 M0R036 132 aa7.19□□□□□ -1.26
CLSTN3-206ENST00000535668 M0R381 172 aa7.19□□□□□ -1.26
CLSTN3-206ENST00000535668 RAB5BP61020 215 aa7.19□□□□□ -1.26
CLSTN3-206ENST00000535668 RPL37AP61513 92 aaKnown RBP7.19□□□□□ -1.26
CLSTN3-206ENST00000535668 UBE2G1P62253 170 aa7.19□□□□□ -1.26
CLSTN3-206ENST00000535668 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.19□□□□□ -1.26
CLSTN3-206ENST00000535668 RPS10P5Q9NQ39 176 aa7.19□□□□□ -1.26
CLSTN3-206ENST00000535668 GNG13Q9P2W3 67 aa7.19□□□□□ -1.26
CLSTN3-206ENST00000535668 NAT8Q9UHE5 227 aa7.19□□□□□ -1.26
CLSTN3-206ENST00000535668 TMA7Q9Y2S6 64 aaKnown RBP7.19□□□□□ -1.26
CLSTN3-206ENST00000535668 TRAV8-4A0A0B4J246 113 aa7.18□□□□□ -1.26
CLSTN3-206ENST00000535668 LOC105371267A0A1B0GV96 52 aa7.18□□□□□ -1.26
CLSTN3-206ENST00000535668 P01737 135 aa7.18□□□□□ -1.26
CLSTN3-206ENST00000535668 CRPP02741 224 aa7.18□□□□□ -1.26
CLSTN3-206ENST00000535668 GZMBP10144 247 aa7.18□□□□□ -1.26
CLSTN3-206ENST00000535668 HNRNPA3P51991 378 aaKnown RBP7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 91.3 ms