RNA–Protein interactions for RNA: ENST00000535493.5

HDAC4-214, Transcript of histone deacetylase 4, humanhuman

TSL 2

Gene HDAC4, Length 2,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-214ENST00000535493 Q6ZSV7 163 aa9.98□□□□□ -0.81
HDAC4-214ENST00000535493 FAM223BA6NKX1 122 aa9.97□□□□□ -0.81
HDAC4-214ENST00000535493 FAM223AQ8IWN6 122 aa9.97□□□□□ -0.81
HDAC4-214ENST00000535493 ATP6V0E2Q8NHE4 81 aa9.97□□□□□ -0.81
HDAC4-214ENST00000535493 CFAP46Q8IYW2 2715 aa9.97□□□□□ -0.81
HDAC4-214ENST00000535493 A8MZ25 164 aa9.97□□□□□ -0.81
HDAC4-214ENST00000535493 H3BUX3 64 aa9.97□□□□□ -0.81
HDAC4-214ENST00000535493 SLC25A20O43772 301 aa9.97□□□□□ -0.81
HDAC4-214ENST00000535493 P0DMU3 169 aa9.97□□□□□ -0.81
HDAC4-214ENST00000535493 FAM231AP0DMU4 169 aa9.97□□□□□ -0.81
HDAC4-214ENST00000535493 FAM231CP0DMU5 169 aa9.97□□□□□ -0.81
HDAC4-214ENST00000535493 KLK9Q2XQG4 91 aa9.97□□□□□ -0.81
HDAC4-214ENST00000535493 SPXQ9BT56 116 aa9.97□□□□□ -0.81
HDAC4-214ENST00000535493 PRRC2AP48634 2157 aaKnown RBP9.96□□□□□ -0.81
HDAC4-214ENST00000535493 IGHV4OR15-8A0A075B7B6 117 aa9.96□□□□□ -0.81
HDAC4-214ENST00000535493 A0A087WW49 117 aa9.96□□□□□ -0.81
HDAC4-214ENST00000535493 C19orf54Q5BKX5 351 aa9.96□□□□□ -0.81
HDAC4-214ENST00000535493 PRSS2P07478 247 aa9.96□□□□□ -0.82
HDAC4-214ENST00000535493 Q8N1Y9 231 aa9.96□□□□□ -0.82
HDAC4-214ENST00000535493 Q9UF83 564 aa9.96□□□□□ -0.82
HDAC4-214ENST00000535493 SPINK13Q1W4C9 94 aa9.95□□□□□ -0.82
HDAC4-214ENST00000535493 TRAV8-3A0A0A6YYJ7 113 aa9.95□□□□□ -0.82
HDAC4-214ENST00000535493 PPP1R17O96001 155 aa9.95□□□□□ -0.82
HDAC4-214ENST00000535493 PROK1P58294 105 aa9.95□□□□□ -0.82
HDAC4-214ENST00000535493 DUX5Q96PT3 197 aa9.95□□□□□ -0.82
HDAC4-214ENST00000535493 TLN2Q9Y4G6 2542 aa9.94□□□□□ -0.82
HDAC4-214ENST00000535493 IGHV1-69DA0A0B4J2H0 117 aa9.94□□□□□ -0.82
HDAC4-214ENST00000535493 TEX49A0A1B0GTD5 131 aa9.94□□□□□ -0.82
HDAC4-214ENST00000535493 KLLNB2CW77 178 aa9.94□□□□□ -0.82
HDAC4-214ENST00000535493 CRLF1O75462 422 aa9.94□□□□□ -0.82
HDAC4-214ENST00000535493 IGHV3-33P01772 117 aa9.94□□□□□ -0.82
HDAC4-214ENST00000535493 NTN5Q8WTR8 489 aaPredicted RBP9.94□□□□□ -0.82
HDAC4-214ENST00000535493 TRBV20-1A0A075B6N2 111 aa9.94□□□□□ -0.82
HDAC4-214ENST00000535493 TIMM17AQ99595 171 aa9.94□□□□□ -0.82
HDAC4-214ENST00000535493 DAZ1Q9NQZ3 744 aaKnown RBP9.94□□□□□ -0.82
HDAC4-214ENST00000535493 TRBV27A0A0K0K1C4 114 aa9.93□□□□□ -0.82
HDAC4-214ENST00000535493 M0QY20 66 aa9.93□□□□□ -0.82
HDAC4-214ENST00000535493 PAPPA-AS1Q5QFB9 102 aa9.93□□□□□ -0.82
HDAC4-214ENST00000535493 TMEM141Q96I45 108 aa9.93□□□□□ -0.82
HDAC4-214ENST00000535493 ERG28Q9UKR5 140 aa9.93□□□□□ -0.82
HDAC4-214ENST00000535493 C19orf84I3L1E1 186 aa9.92□□□□□ -0.82
HDAC4-214ENST00000535493 NXPH4O95158 308 aa9.92□□□□□ -0.82
HDAC4-214ENST00000535493 ZNF22P17026 224 aaPredicted RBP9.92□□□□□ -0.82
HDAC4-214ENST00000535493 LYRM7Q5U5X0 104 aa9.92□□□□□ -0.82
HDAC4-214ENST00000535493 DCANP1Q8TF63 244 aa9.92□□□□□ -0.82
HDAC4-214ENST00000535493 TMEM263Q8WUH6 116 aaKnown RBP9.92□□□□□ -0.82
HDAC4-214ENST00000535493 ANAPC13Q9BS18 74 aa9.92□□□□□ -0.82
HDAC4-214ENST00000535493 SS18L2Q9UHA2 77 aa9.92□□□□□ -0.82
HDAC4-214ENST00000535493 TRAV4A0A0B4J268 109 aa9.92□□□□□ -0.82
HDAC4-214ENST00000535493 TMEM223A0PJW6 202 aa9.92□□□□□ -0.82
HDAC4-214ENST00000535493 KNCNA6PVL3 124 aa9.92□□□□□ -0.82
HDAC4-214ENST00000535493 IGHV1-69P01742 117 aa9.92□□□□□ -0.82
HDAC4-214ENST00000535493 MED14OSP0DP75 135 aa9.92□□□□□ -0.82
HDAC4-214ENST00000535493 APRG1Q8IVJ8 170 aa9.92□□□□□ -0.82
HDAC4-214ENST00000535493 POM121L12Q8N7R1 296 aa9.92□□□□□ -0.82
HDAC4-214ENST00000535493 NF1P21359 2839 aa9.92□□□□□ -0.82
HDAC4-214ENST00000535493 MYO18BQ8IUG5 2567 aa9.92□□□□□ -0.82
HDAC4-214ENST00000535493 IGHV4-61A0A0C4DH41 118 aa9.91□□□□□ -0.82
HDAC4-214ENST00000535493 IGHV3-16A0A0C4DH30 117 aa9.91□□□□□ -0.82
HDAC4-214ENST00000535493 RHODO00212 210 aa9.91□□□□□ -0.82
HDAC4-214ENST00000535493 LY6DQ14210 128 aa9.91□□□□□ -0.82
HDAC4-214ENST00000535493 WNK1Q9H4A3 2382 aa9.91□□□□□ -0.82
HDAC4-214ENST00000535493 SBSPONQ8IVN8 264 aa9.91□□□□□ -0.82
HDAC4-214ENST00000535493 DAND5Q8N907 189 aa9.91□□□□□ -0.82
HDAC4-214ENST00000535493 VCX2Q9H322 139 aa9.91□□□□□ -0.82
HDAC4-214ENST00000535493 ADAMTSL4-AS1Q5T5F5 129 aa9.9□□□□□ -0.82
HDAC4-214ENST00000535493 CHD6Q8TD26 2715 aa9.9□□□□□ -0.82
HDAC4-214ENST00000535493 IGLV4-3A0A075B6K6 122 aa9.9□□□□□ -0.83
HDAC4-214ENST00000535493 B5MCH6 92 aa9.9□□□□□ -0.83
HDAC4-214ENST00000535493 LGALS9O00182 355 aa9.9□□□□□ -0.83
HDAC4-214ENST00000535493 TEX29Q8N6K0 151 aa9.9□□□□□ -0.83
HDAC4-214ENST00000535493 CACNA1AO00555 2505 aa9.89□□□□□ -0.83
HDAC4-214ENST00000535493 NBPF19A0A087WUL8 3843 aa9.89□□□□□ -0.83
HDAC4-214ENST00000535493 A0A0J9YXY3 114 aa9.89□□□□□ -0.83
HDAC4-214ENST00000535493 TRIAP1O43715 76 aa9.89□□□□□ -0.83
HDAC4-214ENST00000535493 ZFAND6Q6FIF0 208 aa9.89□□□□□ -0.83
HDAC4-214ENST00000535493 LEPROTO15243 131 aa9.89□□□□□ -0.83
HDAC4-214ENST00000535493 IGHG2P01859 326 aa9.89□□□□□ -0.83
HDAC4-214ENST00000535493 IGHV3-30-3P0DP02 117 aa9.89□□□□□ -0.83
HDAC4-214ENST00000535493 KLRB1Q12918 225 aa9.89□□□□□ -0.83
HDAC4-214ENST00000535493 C20orf203Q8NBC4 194 aa9.89□□□□□ -0.83
HDAC4-214ENST00000535493 USMG5Q96IX5 58 aa9.88□□□□□ -0.83
HDAC4-214ENST00000535493 JMJD1CQ15652 2540 aa9.88□□□□□ -0.83
HDAC4-214ENST00000535493 HIST2H2BDQ6DRA6 164 aa9.88□□□□□ -0.83
HDAC4-214ENST00000535493 PTPN13Q12923 2485 aa9.88□□□□□ -0.83
HDAC4-214ENST00000535493 CLEC2BQ92478 149 aa9.87□□□□□ -0.83
HDAC4-214ENST00000535493 A0A0U1RRA0 63 aa9.87□□□□□ -0.83
HDAC4-214ENST00000535493 CD28P10747 220 aa9.87□□□□□ -0.83
HDAC4-214ENST00000535493 ID1P41134 155 aa9.87□□□□□ -0.83
HDAC4-214ENST00000535493 LINC01620Q4KN68 170 aa9.87□□□□□ -0.83
HDAC4-214ENST00000535493 C9orf85Q96MD7 179 aa9.87□□□□□ -0.83
HDAC4-214ENST00000535493 FAM208BQ5VWN6 2430 aa9.87□□□□□ -0.83
HDAC4-214ENST00000535493 EPG5Q9HCE0 2579 aa9.86□□□□□ -0.83
HDAC4-214ENST00000535493 ACACBO00763 2458 aa9.86□□□□□ -0.83
HDAC4-214ENST00000535493 AVPP01185 164 aa9.86□□□□□ -0.83
HDAC4-214ENST00000535493 NHLRC4P0CG21 123 aaPredicted RBP9.86□□□□□ -0.83
HDAC4-214ENST00000535493 RPL32P62910 135 aaKnown RBP9.86□□□□□ -0.83
HDAC4-214ENST00000535493 TEX15Q9BXT5 2789 aa9.86□□□□□ -0.83
HDAC4-214ENST00000535493 IGHV3-38A0A0C4DH36 116 aa9.86□□□□□ -0.83
HDAC4-214ENST00000535493 SYNJ2BPP57105 145 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 121.8 ms