RNA–Protein interactions for RNA: ENST00000535094.6

MCF2L-232, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MCF2L, Length 3,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-232ENST00000535094 FAM231CP0DMU5 169 aa11.95□□□□□ -0.5
MCF2L-232ENST00000535094 CRIP2P52943 208 aaPredicted RBP11.95□□□□□ -0.5
MCF2L-232ENST00000535094 SYNJ2BPP57105 145 aa11.95□□□□□ -0.5
MCF2L-232ENST00000535094 ZNRF2Q8NHG8 242 aa11.95□□□□□ -0.5
MCF2L-232ENST00000535094 PSMG3-AS1Q96PY0 264 aa11.95□□□□□ -0.5
MCF2L-232ENST00000535094 PRO0461Q9UI25 63 aa11.95□□□□□ -0.5
MCF2L-232ENST00000535094 ZNF580Q9UK33 172 aa11.95□□□□□ -0.5
MCF2L-232ENST00000535094 LENEPQ9Y5L5 61 aa11.95□□□□□ -0.5
MCF2L-232ENST00000535094 C2orf82Q6UX34 121 aa11.95□□□□□ -0.5
MCF2L-232ENST00000535094 PRRC2AP48634 2157 aaKnown RBP11.95□□□□□ -0.5
MCF2L-232ENST00000535094 IGHV3-16A0A0C4DH30 117 aa11.94□□□□□ -0.5
MCF2L-232ENST00000535094 TMEM262E9PQX1 116 aa11.94□□□□□ -0.5
MCF2L-232ENST00000535094 PRM2P04554 102 aa11.94□□□□□ -0.5
MCF2L-232ENST00000535094 TIMM21Q9BVV7 248 aa11.94□□□□□ -0.5
MCF2L-232ENST00000535094 MTORP42345 2549 aa11.94□□□□□ -0.5
MCF2L-232ENST00000535094 Q8N1Y9 231 aa11.94□□□□□ -0.5
MCF2L-232ENST00000535094 MUC4Q99102 2169 aa11.94□□□□□ -0.5
MCF2L-232ENST00000535094 CELSR1Q9NYQ6 3014 aa11.94□□□□□ -0.5
MCF2L-232ENST00000535094 IGHV1-69DA0A0B4J2H0 117 aa11.94□□□□□ -0.5
MCF2L-232ENST00000535094 IGHV1-69P01742 117 aa11.94□□□□□ -0.5
MCF2L-232ENST00000535094 TMEM141Q96I45 108 aa11.94□□□□□ -0.5
MCF2L-232ENST00000535094 TRAV8-4A0A0B4J246 113 aa11.93□□□□□ -0.5
MCF2L-232ENST00000535094 DUX3Q96PT4 197 aa11.93□□□□□ -0.5
MCF2L-232ENST00000535094 PIMREGQ9BSJ6 248 aa11.93□□□□□ -0.5
MCF2L-232ENST00000535094 IGKV3OR2-268A0A0C4DH90 116 aa11.93□□□□□ -0.5
MCF2L-232ENST00000535094 A8MZ25 164 aa11.93□□□□□ -0.5
MCF2L-232ENST00000535094 CRYGDP07320 174 aa11.93□□□□□ -0.5
MCF2L-232ENST00000535094 LMO4P61968 165 aa11.92□□□□□ -0.5
MCF2L-232ENST00000535094 GPHB5Q86YW7 130 aa11.92□□□□□ -0.5
MCF2L-232ENST00000535094 IGHV4-4A0A075B6R2 117 aa11.92□□□□□ -0.5
MCF2L-232ENST00000535094 RPL13AP40429 203 aaKnown RBP11.92□□□□□ -0.5
MCF2L-232ENST00000535094 UBE2D1P51668 147 aa11.92□□□□□ -0.5
MCF2L-232ENST00000535094 C3orf56Q8N813 242 aa11.92□□□□□ -0.5
MCF2L-232ENST00000535094 CARD19Q96LW7 228 aa11.92□□□□□ -0.5
MCF2L-232ENST00000535094 CCL19Q99731 98 aa11.92□□□□□ -0.5
MCF2L-232ENST00000535094 TSHBP01222 138 aa11.91□□□□□ -0.5
MCF2L-232ENST00000535094 ATXN8Q156A1 80 aa11.91□□□□□ -0.5
MCF2L-232ENST00000535094 SLC25A29Q8N8R3 303 aa11.91□□□□□ -0.5
MCF2L-232ENST00000535094 CDIP1Q9H305 208 aa11.91□□□□□ -0.5
MCF2L-232ENST00000535094 TEX49A0A1B0GTD5 131 aa11.91□□□□□ -0.5
MCF2L-232ENST00000535094 IGHV3-30P01768 117 aa11.91□□□□□ -0.5
MCF2L-232ENST00000535094 IGHV3-30-5P0DP03 117 aa11.91□□□□□ -0.5
MCF2L-232ENST00000535094 C10orf99Q6UWK7 81 aa11.91□□□□□ -0.5
MCF2L-232ENST00000535094 USMG5Q96IX5 58 aa11.91□□□□□ -0.5
MCF2L-232ENST00000535094 IGLV4-69A0A075B6H9 119 aa11.91□□□□□ -0.5
MCF2L-232ENST00000535094 IGHV4-61A0A0C4DH41 118 aa11.91□□□□□ -0.5
MCF2L-232ENST00000535094 LINC01546A6NGU7 62 aa11.91□□□□□ -0.5
MCF2L-232ENST00000535094 M0R2P5 195 aa11.91□□□□□ -0.5
MCF2L-232ENST00000535094 GATA3P23771 443 aa11.9□□□□□ -0.5
MCF2L-232ENST00000535094 C11orf71Q6IPW1 123 aa11.9□□□□□ -0.5
MCF2L-232ENST00000535094 ITLN2Q8WWU7 325 aaPredicted RBP11.9□□□□□ -0.5
MCF2L-232ENST00000535094 GNLYP22749 145 aa11.9□□□□□ -0.5
MCF2L-232ENST00000535094 NDUFA12Q9UI09 145 aa11.9□□□□□ -0.5
MCF2L-232ENST00000535094 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.89□□□□□ -0.51
MCF2L-232ENST00000535094 IGKV2-29A2NJV5 120 aaPredicted RBP11.89□□□□□ -0.51
MCF2L-232ENST00000535094 PROK1P58294 105 aa11.89□□□□□ -0.51
MCF2L-232ENST00000535094 HIVEP2P31629 2446 aa11.89□□□□□ -0.51
MCF2L-232ENST00000535094 IGHV1OR15-1A0A075B7D0 117 aa11.89□□□□□ -0.51
MCF2L-232ENST00000535094 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.89□□□□□ -0.51
MCF2L-232ENST00000535094 IGIPA6NJ69 53 aa11.89□□□□□ -0.51
MCF2L-232ENST00000535094 Q6ZSV7 163 aa11.89□□□□□ -0.51
MCF2L-232ENST00000535094 CLEC2BQ92478 149 aa11.89□□□□□ -0.51
MCF2L-232ENST00000535094 HRNRQ86YZ3 2850 aaPredicted RBP11.88□□□□□ -0.51
MCF2L-232ENST00000535094 I3L3M4 83 aa11.88□□□□□ -0.51
MCF2L-232ENST00000535094 MEIG1Q5JSS6 88 aa11.88□□□□□ -0.51
MCF2L-232ENST00000535094 C11orf44Q8N8P7 122 aa11.88□□□□□ -0.51
MCF2L-232ENST00000535094 U3KQE9 123 aa11.88□□□□□ -0.51
MCF2L-232ENST00000535094 TCTEX1D4Q5JR98 221 aa11.88□□□□□ -0.51
MCF2L-232ENST00000535094 UCNP55089 124 aa11.88□□□□□ -0.51
MCF2L-232ENST00000535094 C15orf53Q8NAA6 179 aa11.88□□□□□ -0.51
MCF2L-232ENST00000535094 PKD1L2Q7Z442 2459 aa11.87□□□□□ -0.51
MCF2L-232ENST00000535094 POLR2KP53803 58 aaKnown RBP11.87□□□□□ -0.51
MCF2L-232ENST00000535094 FHL3Q13643 280 aa11.87□□□□□ -0.51
MCF2L-232ENST00000535094 LINC01620Q4KN68 170 aa11.87□□□□□ -0.51
MCF2L-232ENST00000535094 HIST2H2BDQ6DRA6 164 aa11.87□□□□□ -0.51
MCF2L-232ENST00000535094 TIMM17AQ99595 171 aa11.87□□□□□ -0.51
MCF2L-232ENST00000535094 RHODO00212 210 aa11.86□□□□□ -0.51
MCF2L-232ENST00000535094 DEFB131AP59861 70 aa11.86□□□□□ -0.51
MCF2L-232ENST00000535094 ATP6V0E2Q8NHE4 81 aa11.86□□□□□ -0.51
MCF2L-232ENST00000535094 LINC01587Q99440 93 aa11.86□□□□□ -0.51
MCF2L-232ENST00000535094 CUBNO60494 3623 aa11.86□□□□□ -0.51
MCF2L-232ENST00000535094 PRSS47A8MTI9 375 aa11.86□□□□□ -0.51
MCF2L-232ENST00000535094 H3BMM0 161 aa11.86□□□□□ -0.51
MCF2L-232ENST00000535094 LEPROTO15243 131 aa11.86□□□□□ -0.51
MCF2L-232ENST00000535094 IGHV3-33P01772 117 aa11.86□□□□□ -0.51
MCF2L-232ENST00000535094 COX6B1P14854 86 aa11.86□□□□□ -0.51
MCF2L-232ENST00000535094 FBXL19-AS1Q494R0 122 aa11.86□□□□□ -0.51
MCF2L-232ENST00000535094 UBE2WQ96B02 151 aa11.86□□□□□ -0.51
MCF2L-232ENST00000535094 EPG5Q9HCE0 2579 aa11.86□□□□□ -0.51
MCF2L-232ENST00000535094 NRGNQ92686 78 aa11.86□□□□□ -0.51
MCF2L-232ENST00000535094 IGHV3-53P01767 116 aa11.85□□□□□ -0.51
MCF2L-232ENST00000535094 IGHV3-30-3P0DP02 117 aa11.85□□□□□ -0.51
MCF2L-232ENST00000535094 ZNF22P17026 224 aaPredicted RBP11.85□□□□□ -0.51
MCF2L-232ENST00000535094 UBE2D3P61077 147 aa11.85□□□□□ -0.51
MCF2L-232ENST00000535094 UBE2D2P62837 147 aa11.85□□□□□ -0.51
MCF2L-232ENST00000535094 TRAV4A0A0B4J268 109 aa11.84□□□□□ -0.51
MCF2L-232ENST00000535094 DEFB136Q30KP8 78 aa11.84□□□□□ -0.51
MCF2L-232ENST00000535094 TRAV13-1A0A0B4J241 112 aa11.84□□□□□ -0.51
MCF2L-232ENST00000535094 C20orf203Q8NBC4 194 aa11.84□□□□□ -0.51
MCF2L-232ENST00000535094 IGHV4-59P01825 116 aa11.83□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms