RNA–Protein interactions for RNA: ENST00000534538.1

RECQL4-207, Transcript of RecQ like helicase 4, humanhuman

TSL 3

Gene RECQL4, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RECQL4-207ENST00000534538 IGHV3-33P01772 117 aa11.75□□□□□ -0.53
RECQL4-207ENST00000534538 IGHV3-30-3P0DP02 117 aa11.75□□□□□ -0.53
RECQL4-207ENST00000534538 IGHV3-30-5P0DP03 117 aa11.75□□□□□ -0.53
RECQL4-207ENST00000534538 FAM231DQ6ZW35 169 aa11.75□□□□□ -0.53
RECQL4-207ENST00000534538 IMMP2LQ96T52 175 aa11.75□□□□□ -0.53
RECQL4-207ENST00000534538 IGHV3-73A0A0B4J1V6 119 aa11.74□□□□□ -0.53
RECQL4-207ENST00000534538 PRR27Q6MZM9 219 aa11.74□□□□□ -0.53
RECQL4-207ENST00000534538 BTF3L4Q96K17 158 aa11.74□□□□□ -0.53
RECQL4-207ENST00000534538 RPL19P84098 196 aaKnown RBP11.73□□□□□ -0.53
RECQL4-207ENST00000534538 NUDT10Q8NFP7 164 aa11.73□□□□□ -0.53
RECQL4-207ENST00000534538 NUDT11Q96G61 164 aa11.73□□□□□ -0.53
RECQL4-207ENST00000534538 RNASE7Q9H1E1 156 aaKnown RBP11.73□□□□□ -0.53
RECQL4-207ENST00000534538 RNASE3P12724 160 aaKnown RBP11.72□□□□□ -0.53
RECQL4-207ENST00000534538 SMUG1Q53HV7 270 aa11.72□□□□□ -0.53
RECQL4-207ENST00000534538 PIK3CD-AS1Q5SR53 167 aa11.72□□□□□ -0.53
RECQL4-207ENST00000534538 ZFP2Q6ZN57 461 aa11.72□□□□□ -0.53
RECQL4-207ENST00000534538 IL36BQ9NZH7 164 aa11.72□□□□□ -0.53
RECQL4-207ENST00000534538 URGCP-MRPS24S4R325 110 aa11.72□□□□□ -0.53
RECQL4-207ENST00000534538 TRAV8-3A0A0A6YYJ7 113 aa11.71□□□□□ -0.53
RECQL4-207ENST00000534538 COLCA2A8K830 154 aa11.71□□□□□ -0.53
RECQL4-207ENST00000534538 P01737 135 aa11.71□□□□□ -0.53
RECQL4-207ENST00000534538 ELOBQ15370 118 aa11.71□□□□□ -0.53
RECQL4-207ENST00000534538 Q6ZSA8 131 aa11.71□□□□□ -0.53
RECQL4-207ENST00000534538 PLA2G1BP04054 148 aaKnown RBP11.7□□□□□ -0.54
RECQL4-207ENST00000534538 COX8CQ7Z4L0 72 aa11.7□□□□□ -0.54
RECQL4-207ENST00000534538 V9GYV3 84 aa11.7□□□□□ -0.54
RECQL4-207ENST00000534538 FABP5P3A8MUU1 101 aa11.69□□□□□ -0.54
RECQL4-207ENST00000534538 A8MWL6 223 aa11.69□□□□□ -0.54
RECQL4-207ENST00000534538 A8MWV9 139 aa11.69□□□□□ -0.54
RECQL4-207ENST00000534538 J3QL48 77 aa11.69□□□□□ -0.54
RECQL4-207ENST00000534538 LINC00694P0DN24 101 aa11.69□□□□□ -0.54
RECQL4-207ENST00000534538 WFDC2Q14508 124 aa11.69□□□□□ -0.54
RECQL4-207ENST00000534538 ZC2HC1AQ96GY0 325 aa11.69□□□□□ -0.54
RECQL4-207ENST00000534538 TRAV9-1A0A075B6T8 112 aa11.68□□□□□ -0.54
RECQL4-207ENST00000534538 C19orf71A6NCJ1 209 aa11.68□□□□□ -0.54
RECQL4-207ENST00000534538 FAM162BQ5T6X4 162 aa11.68□□□□□ -0.54
RECQL4-207ENST00000534538 RPP21Q9H633 154 aaKnown RBP11.68□□□□□ -0.54
RECQL4-207ENST00000534538 COX11Q9Y6N1 276 aa11.68□□□□□ -0.54
RECQL4-207ENST00000534538 DNAH8Q96JB1 4490 aa11.67□□□□□ -0.54
RECQL4-207ENST00000534538 TRBV24-1A0A075B6N3 115 aa11.67□□□□□ -0.54
RECQL4-207ENST00000534538 XKRY2A2RUG3 117 aa11.67□□□□□ -0.54
RECQL4-207ENST00000534538 CT83Q5H943 113 aa11.67□□□□□ -0.54
RECQL4-207ENST00000534538 Q8N3U1 123 aa11.67□□□□□ -0.54
RECQL4-207ENST00000534538 TGIF2-C20orf24A0A0A6YYL0 155 aa11.66□□□□□ -0.54
RECQL4-207ENST00000534538 IGKV3D-20A0A0C4DH25 116 aa11.66□□□□□ -0.54
RECQL4-207ENST00000534538 GAGE12JA6NER3 117 aa11.66□□□□□ -0.54
RECQL4-207ENST00000534538 RAB5AP20339 215 aa11.66□□□□□ -0.54
RECQL4-207ENST00000534538 GAGE1Q13065 139 aa11.66□□□□□ -0.54
RECQL4-207ENST00000534538 GAGE4Q13068 117 aa11.66□□□□□ -0.54
RECQL4-207ENST00000534538 GAGE5Q13069 117 aa11.66□□□□□ -0.54
RECQL4-207ENST00000534538 GAGE13Q4V321 117 aa11.66□□□□□ -0.54
RECQL4-207ENST00000534538 UFSP1Q6NVU6 142 aa11.66□□□□□ -0.54
RECQL4-207ENST00000534538 DAZ4Q86SG3 579 aaKnown RBP11.66□□□□□ -0.54
RECQL4-207ENST00000534538 OR2D3Q8NGH3 330 aa11.66□□□□□ -0.54
RECQL4-207ENST00000534538 TSKUQ8WUA8 353 aa11.66□□□□□ -0.54
RECQL4-207ENST00000534538 YPEL4Q96NS1 127 aa11.66□□□□□ -0.54
RECQL4-207ENST00000534538 DAZ3Q9NR90 486 aaKnown RBP11.66□□□□□ -0.54
RECQL4-207ENST00000534538 SMIM27A0A1W2PRY6 76 aa11.65□□□□□ -0.54
RECQL4-207ENST00000534538 KRTAP29-1A8MX34 341 aaPredicted RBP11.65□□□□□ -0.54
RECQL4-207ENST00000534538 S100A4P26447 101 aaKnown RBP11.65□□□□□ -0.54
RECQL4-207ENST00000534538 CRIP1P50238 77 aa11.65□□□□□ -0.54
RECQL4-207ENST00000534538 RPS20P60866 119 aaKnown RBP11.65□□□□□ -0.54
RECQL4-207ENST00000534538 LINC00528Q8N1L1 170 aa11.65□□□□□ -0.54
RECQL4-207ENST00000534538 Q9UF83 564 aa11.65□□□□□ -0.54
RECQL4-207ENST00000534538 FAM231BA6NCW3 169 aa11.64□□□□□ -0.55
RECQL4-207ENST00000534538 LECT2O14960 151 aa11.64□□□□□ -0.55
RECQL4-207ENST00000534538 SH2D1AO60880 128 aa11.64□□□□□ -0.55
RECQL4-207ENST00000534538 CXCL1P09341 107 aa11.64□□□□□ -0.55
RECQL4-207ENST00000534538 ASIPP42127 132 aa11.64□□□□□ -0.55
RECQL4-207ENST00000534538 RPS10P46783 165 aaKnown RBP11.64□□□□□ -0.55
RECQL4-207ENST00000534538 DEFB104AQ8WTQ1 72 aa11.64□□□□□ -0.55
RECQL4-207ENST00000534538 GFRA4Q9GZZ7 299 aa11.64□□□□□ -0.55
RECQL4-207ENST00000534538 NAT8BQ9UHF3 227 aa11.64□□□□□ -0.55
RECQL4-207ENST00000534538 DNLZQ5SXM8 178 aa11.63□□□□□ -0.55
RECQL4-207ENST00000534538 Q8N976 141 aa11.63□□□□□ -0.55
RECQL4-207ENST00000534538 RMI2Q96E14 147 aa11.63□□□□□ -0.55
RECQL4-207ENST00000534538 JPT2Q9H910 190 aa11.63□□□□□ -0.55
RECQL4-207ENST00000534538 COX19Q49B96 90 aa11.62□□□□□ -0.55
RECQL4-207ENST00000534538 C14orf178Q8N769 122 aaPredicted RBP11.62□□□□□ -0.55
RECQL4-207ENST00000534538 BAALCQ8WXS3 180 aa11.62□□□□□ -0.55
RECQL4-207ENST00000534538 SAMD10Q9BYL1 202 aa11.62□□□□□ -0.55
RECQL4-207ENST00000534538 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.61□□□□□ -0.55
RECQL4-207ENST00000534538 C1orf196B1AJZ1 125 aa11.61□□□□□ -0.55
RECQL4-207ENST00000534538 RHODO00212 210 aa11.61□□□□□ -0.55
RECQL4-207ENST00000534538 DMRTA1Q5VZB9 504 aa11.61□□□□□ -0.55
RECQL4-207ENST00000534538 NIT1Q86X76 327 aa11.61□□□□□ -0.55
RECQL4-207ENST00000534538 FOXA3P55318 350 aaPredicted RBP11.6□□□□□ -0.55
RECQL4-207ENST00000534538 SYT8Q8NBV8 401 aa11.6□□□□□ -0.55
RECQL4-207ENST00000534538 BORCS7Q96B45 105 aa11.6□□□□□ -0.55
RECQL4-207ENST00000534538 HIGD1CA8MV81 97 aa11.59□□□□□ -0.55
RECQL4-207ENST00000534538 NUP35Q8NFH5 326 aa11.59□□□□□ -0.55
RECQL4-207ENST00000534538 TMA7Q9Y2S6 64 aaKnown RBP11.59□□□□□ -0.55
RECQL4-207ENST00000534538 H3BVH4 76 aa11.58□□□□□ -0.56
RECQL4-207ENST00000534538 ARMS2P0C7Q2 107 aa11.58□□□□□ -0.56
RECQL4-207ENST00000534538 RAB5BP61020 215 aa11.58□□□□□ -0.56
RECQL4-207ENST00000534538 LINC01559Q495D7 138 aa11.58□□□□□ -0.56
RECQL4-207ENST00000534538 LINC01620Q4KN68 170 aa11.58□□□□□ -0.56
RECQL4-207ENST00000534538 SCXQ7RTU7 201 aa11.58□□□□□ -0.56
RECQL4-207ENST00000534538 PGLYRP4Q96LB8 373 aa11.58□□□□□ -0.56
RECQL4-207ENST00000534538 CHCHD7Q9BUK0 85 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms