RNA–Protein interactions for RNA: ENST00000534405.5

SMPD1-210, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-210ENST00000534405 CLPSL1A2RUU4 121 aa14.41□□□□□ -0.1
SMPD1-210ENST00000534405 BUB3O43684 328 aa14.41□□□□□ -0.1
SMPD1-210ENST00000534405 ACYP1P07311 99 aa14.4□□□□□ -0.1
SMPD1-210ENST00000534405 ZNF22P17026 224 aaPredicted RBP14.4□□□□□ -0.1
SMPD1-210ENST00000534405 CLEC19AQ6UXS0 136 aa14.4□□□□□ -0.1
SMPD1-210ENST00000534405 J3QQQ9 107 aa14.4□□□□□ -0.1
SMPD1-210ENST00000534405 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa14.4□□□□□ -0.1
SMPD1-210ENST00000534405 MUSTN1Q8IVN3 82 aa14.4□□□□□ -0.1
SMPD1-210ENST00000534405 CRYGAP11844 174 aa14.39□□□□□ -0.11
SMPD1-210ENST00000534405 COX7CP15954 63 aa14.39□□□□□ -0.11
SMPD1-210ENST00000534405 KLK9Q2XQG4 91 aa14.39□□□□□ -0.11
SMPD1-210ENST00000534405 SPANXN1Q5VSR9 72 aa14.39□□□□□ -0.11
SMPD1-210ENST00000534405 ZNRF2Q8NHG8 242 aa14.39□□□□□ -0.11
SMPD1-210ENST00000534405 LINC00527Q9UJ94 153 aa14.39□□□□□ -0.11
SMPD1-210ENST00000534405 KLK9Q9UKQ9 250 aa14.39□□□□□ -0.11
SMPD1-210ENST00000534405 RNF223E7ERA6 249 aa14.39□□□□□ -0.11
SMPD1-210ENST00000534405 TSHBP01222 138 aa14.39□□□□□ -0.11
SMPD1-210ENST00000534405 BEX4Q9NWD9 120 aaPredicted RBP14.39□□□□□ -0.11
SMPD1-210ENST00000534405 IGHV3-49A0A0A0MS15 119 aa14.38□□□□□ -0.11
SMPD1-210ENST00000534405 LGALS3P17931 250 aaKnown RBP14.38□□□□□ -0.11
SMPD1-210ENST00000534405 GAGE2AQ6NT46 116 aa14.37□□□□□ -0.11
SMPD1-210ENST00000534405 IGHV1-69DA0A0B4J2H0 117 aa14.37□□□□□ -0.11
SMPD1-210ENST00000534405 C19orf84I3L1E1 186 aa14.37□□□□□ -0.11
SMPD1-210ENST00000534405 TMEM223A0PJW6 202 aa14.36□□□□□ -0.11
SMPD1-210ENST00000534405 ABCA2Q9BZC7 2435 aa14.36□□□□□ -0.11
SMPD1-210ENST00000534405 C2orf48Q96LS8 159 aa14.35□□□□□ -0.11
SMPD1-210ENST00000534405 LINC00643Q86TS7 51 aa14.35□□□□□ -0.11
SMPD1-210ENST00000534405 C5orf56Q8N8D9 126 aa14.35□□□□□ -0.11
SMPD1-210ENST00000534405 RPL39LQ96EH5 51 aaKnown RBP14.35□□□□□ -0.11
SMPD1-210ENST00000534405 VPS13CQ709C8 3753 aa14.35□□□□□ -0.11
SMPD1-210ENST00000534405 IGHV3OR16-10A0A075B7F0 116 aa14.34□□□□□ -0.11
SMPD1-210ENST00000534405 IGIPA6NJ69 53 aa14.34□□□□□ -0.11
SMPD1-210ENST00000534405 CELSR1Q9NYQ6 3014 aa14.34□□□□□ -0.11
SMPD1-210ENST00000534405 ITLN2Q8WWU7 325 aaPredicted RBP14.34□□□□□ -0.11
SMPD1-210ENST00000534405 AGPAT4-IT1Q9H0P7 198 aa14.34□□□□□ -0.11
SMPD1-210ENST00000534405 ICOSQ9Y6W8 199 aa14.34□□□□□ -0.11
SMPD1-210ENST00000534405 F5H768 121 aa14.33□□□□□ -0.12
SMPD1-210ENST00000534405 M0R381 172 aa14.33□□□□□ -0.12
SMPD1-210ENST00000534405 EEF1AKMT3Q96AZ1 226 aa14.32□□□□□ -0.12
SMPD1-210ENST00000534405 LST1O00453 97 aa14.32□□□□□ -0.12
SMPD1-210ENST00000534405 OVOL1O14753 267 aa14.32□□□□□ -0.12
SMPD1-210ENST00000534405 LEPROTO15243 131 aa14.32□□□□□ -0.12
SMPD1-210ENST00000534405 CXCL5P42830 114 aa14.32□□□□□ -0.12
SMPD1-210ENST00000534405 SMCR5Q8TEV8 140 aa14.32□□□□□ -0.12
SMPD1-210ENST00000534405 TMEM141Q96I45 108 aa14.32□□□□□ -0.12
SMPD1-210ENST00000534405 ZNF256Q9Y2P7 627 aaPredicted RBP14.32□□□□□ -0.12
SMPD1-210ENST00000534405 SPTAN1Q13813 2472 aaKnown RBP14.31□□□□□ -0.12
SMPD1-210ENST00000534405 COX6CP09669 75 aa14.31□□□□□ -0.12
SMPD1-210ENST00000534405 C5orf38Q86SI9 138 aa14.31□□□□□ -0.12
SMPD1-210ENST00000534405 ITPR1Q14643 2758 aa14.31□□□□□ -0.12
SMPD1-210ENST00000534405 ZNF876PQ49A33 203 aa14.31□□□□□ -0.12
SMPD1-210ENST00000534405 SDIM1Q6ZPB5 146 aa14.3□□□□□ -0.12
SMPD1-210ENST00000534405 TRBV7-1A0A0A6YYK4 115 aa14.3□□□□□ -0.12
SMPD1-210ENST00000534405 A0A0J9YX75 114 aa14.3□□□□□ -0.12
SMPD1-210ENST00000534405 DPH3P1Q9H4G8 78 aa14.3□□□□□ -0.12
SMPD1-210ENST00000534405 TP53TG1Q9Y2A0 90 aa14.3□□□□□ -0.12
SMPD1-210ENST00000534405 U3KQE9 123 aa14.3□□□□□ -0.12
SMPD1-210ENST00000534405 DPH3Q96FX2 82 aa14.29□□□□□ -0.12
SMPD1-210ENST00000534405 BRD3OSQ6XYD6 125 aa14.29□□□□□ -0.12
SMPD1-210ENST00000534405 TIMM17AQ99595 171 aa14.29□□□□□ -0.12
SMPD1-210ENST00000534405 SDHAF1A6NFY7 115 aa14.28□□□□□ -0.12
SMPD1-210ENST00000534405 C19orf54Q5BKX5 351 aa14.28□□□□□ -0.12
SMPD1-210ENST00000534405 MRAPQ8TCY5 172 aa14.28□□□□□ -0.12
SMPD1-210ENST00000534405 PPP1R17O96001 155 aa14.27□□□□□ -0.12
SMPD1-210ENST00000534405 TRAV41A0A0B4J266 112 aa14.27□□□□□ -0.13
SMPD1-210ENST00000534405 TRACP01848 142 aa14.27□□□□□ -0.13
SMPD1-210ENST00000534405 GNLYP22749 145 aa14.27□□□□□ -0.13
SMPD1-210ENST00000534405 TMEM258P61165 79 aa14.27□□□□□ -0.13
SMPD1-210ENST00000534405 HIST1H4AP62805 103 aaKnown RBP14.27□□□□□ -0.13
SMPD1-210ENST00000534405 KIR2DL5BQ8NHK3 375 aa14.27□□□□□ -0.13
SMPD1-210ENST00000534405 CLEC2BQ92478 149 aa14.26□□□□□ -0.13
SMPD1-210ENST00000534405 TRBV12-3P01733 135 aa14.26□□□□□ -0.13
SMPD1-210ENST00000534405 GPHB5Q86YW7 130 aa14.26□□□□□ -0.13
SMPD1-210ENST00000534405 MOB4Q9Y3A3 225 aa14.26□□□□□ -0.13
SMPD1-210ENST00000534405 hADV29S1A0JD25 119 aa14.25□□□□□ -0.13
SMPD1-210ENST00000534405 DCANP1Q8TF63 244 aa14.25□□□□□ -0.13
SMPD1-210ENST00000534405 ATOX1O00244 68 aa14.24□□□□□ -0.13
SMPD1-210ENST00000534405 PRR9Q5T870 116 aa14.24□□□□□ -0.13
SMPD1-210ENST00000534405 UNQ9165/PRO28630Q6UXU0 137 aa14.24□□□□□ -0.13
SMPD1-210ENST00000534405 C9orf47Q6ZRZ4 202 aa14.24□□□□□ -0.13
SMPD1-210ENST00000534405 C20orf173Q96LM9 149 aa14.24□□□□□ -0.13
SMPD1-210ENST00000534405 IGF1P05019 195 aa14.24□□□□□ -0.13
SMPD1-210ENST00000534405 MRPL53Q96EL3 112 aaKnown RBP14.24□□□□□ -0.13
SMPD1-210ENST00000534405 IGHV4-61A0A0C4DH41 118 aa14.23□□□□□ -0.13
SMPD1-210ENST00000534405 A0A0J9YXY3 114 aa14.23□□□□□ -0.13
SMPD1-210ENST00000534405 IGHV1-69P01742 117 aa14.23□□□□□ -0.13
SMPD1-210ENST00000534405 C4orf26Q17RF5 130 aa14.23□□□□□ -0.13
SMPD1-210ENST00000534405 Q5XG85 94 aa14.23□□□□□ -0.13
SMPD1-210ENST00000534405 PRORYQ9H606 182 aa14.23□□□□□ -0.13
SMPD1-210ENST00000534405 OXTP01178 125 aa14.22□□□□□ -0.13
SMPD1-210ENST00000534405 C16orf92Q96LL3 132 aa14.22□□□□□ -0.13
SMPD1-210ENST00000534405 CYSTM1Q9H1C7 97 aa14.22□□□□□ -0.13
SMPD1-210ENST00000534405 SPRY2O43597 315 aa14.22□□□□□ -0.13
SMPD1-210ENST00000534405 MGPP08493 103 aa14.22□□□□□ -0.13
SMPD1-210ENST00000534405 LITAFQ99732 161 aa14.22□□□□□ -0.13
SMPD1-210ENST00000534405 FAM223BA6NKX1 122 aa14.21□□□□□ -0.13
SMPD1-210ENST00000534405 IGHV4-38-2P0DP08 117 aa14.21□□□□□ -0.13
SMPD1-210ENST00000534405 DEFB1P60022 68 aa14.21□□□□□ -0.13
SMPD1-210ENST00000534405 RPL39P62891 51 aaKnown RBP14.21□□□□□ -0.13
SMPD1-210ENST00000534405 FAM223AQ8IWN6 122 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms