RNA–Protein interactions for RNA: ENST00000533953.5

CMTM1-219, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 934 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-219ENST00000533953 CLLU1Q5K131 121 aa9.04□□□□□ -0.96
CMTM1-219ENST00000533953 OR10G8Q8NGN5 311 aa9.04□□□□□ -0.96
CMTM1-219ENST00000533953 TSKUQ8WUA8 353 aa9.04□□□□□ -0.96
CMTM1-219ENST00000533953 CNFNQ9BYD5 112 aa9.04□□□□□ -0.96
CMTM1-219ENST00000533953 DPH3P1Q9H4G8 78 aa9.04□□□□□ -0.96
CMTM1-219ENST00000533953 TRAV9-2A0A087WT02 112 aa9.03□□□□□ -0.96
CMTM1-219ENST00000533953 HIGD1CA8MV81 97 aa9.03□□□□□ -0.96
CMTM1-219ENST00000533953 CT83Q5H943 113 aa9.03□□□□□ -0.96
CMTM1-219ENST00000533953 LINC01556Q5JQF7 62 aa9.03□□□□□ -0.96
CMTM1-219ENST00000533953 Q6ZRN7 208 aaPredicted RBP9.03□□□□□ -0.96
CMTM1-219ENST00000533953 DAZ4Q86SG3 579 aaKnown RBP9.03□□□□□ -0.96
CMTM1-219ENST00000533953 C15orf54Q8N8G6 183 aa9.03□□□□□ -0.96
CMTM1-219ENST00000533953 SMDT1Q9H4I9 107 aa9.03□□□□□ -0.96
CMTM1-219ENST00000533953 DAZ3Q9NR90 486 aaKnown RBP9.03□□□□□ -0.96
CMTM1-219ENST00000533953 GAS8-AS1O95177 125 aa9.02□□□□□ -0.97
CMTM1-219ENST00000533953 NTM-AS1Q6ZSK4 140 aa9.02□□□□□ -0.97
CMTM1-219ENST00000533953 GATD1Q8NB37 220 aa9.02□□□□□ -0.97
CMTM1-219ENST00000533953 Q9HAA7 133 aa9.02□□□□□ -0.97
CMTM1-219ENST00000533953 FUSP35637 526 aaKnown RBP eCLIP9.01□□□□□ -0.97
CMTM1-219ENST00000533953 RASL11AQ6T310 242 aa9.01□□□□□ -0.97
CMTM1-219ENST00000533953 NUP35Q8NFH5 326 aa9.01□□□□□ -0.97
CMTM1-219ENST00000533953 DNAJC30Q96LL9 226 aa9.01□□□□□ -0.97
CMTM1-219ENST00000533953 A0A087WWC5 75 aa9□□□□□ -0.97
CMTM1-219ENST00000533953 TRBV6-8A0A0A6YYG3 113 aa9□□□□□ -0.97
CMTM1-219ENST00000533953 A0A1B0GUT8 65 aa9□□□□□ -0.97
CMTM1-219ENST00000533953 IBA57-AS1B1ANH7 110 aa9□□□□□ -0.97
CMTM1-219ENST00000533953 NIT1Q86X76 327 aa9□□□□□ -0.97
CMTM1-219ENST00000533953 RPL39LQ96EH5 51 aaKnown RBP9□□□□□ -0.97
CMTM1-219ENST00000533953 BORCS7Q96B45 105 aa8.99□□□□□ -0.97
CMTM1-219ENST00000533953 GFRA4Q9GZZ7 299 aa8.99□□□□□ -0.97
CMTM1-219ENST00000533953 NIT2Q9NQR4 276 aa8.99□□□□□ -0.97
CMTM1-219ENST00000533953 PKD1P98161 4303 aa8.99□□□□□ -0.97
CMTM1-219ENST00000533953 TMEM262E9PQX1 116 aa8.98□□□□□ -0.97
CMTM1-219ENST00000533953 H7C1H1 209 aa8.98□□□□□ -0.97
CMTM1-219ENST00000533953 SMIM15Q7Z3B0 74 aa8.98□□□□□ -0.97
CMTM1-219ENST00000533953 RNF185Q96GF1 192 aa8.98□□□□□ -0.97
CMTM1-219ENST00000533953 DNAH11Q96DT5 4516 aa8.98□□□□□ -0.97
CMTM1-219ENST00000533953 HECTD4Q9Y4D8 3996 aa8.97□□□□□ -0.97
CMTM1-219ENST00000533953 SMIM27A0A1W2PRY6 76 aa8.97□□□□□ -0.97
CMTM1-219ENST00000533953 FAM231BA6NCW3 169 aa8.97□□□□□ -0.97
CMTM1-219ENST00000533953 KRTAP10-2P60368 255 aa8.97□□□□□ -0.97
CMTM1-219ENST00000533953 GAGE6Q13070 117 aa8.97□□□□□ -0.97
CMTM1-219ENST00000533953 AMN1Q8IY45 258 aa8.97□□□□□ -0.97
CMTM1-219ENST00000533953 C10orf126Q8N4M7 172 aa8.97□□□□□ -0.97
CMTM1-219ENST00000533953 CHCHD5Q9BSY4 110 aa8.97□□□□□ -0.97
CMTM1-219ENST00000533953 NAT8BQ9UHF3 227 aa8.97□□□□□ -0.97
CMTM1-219ENST00000533953 KLK12Q9UKR0 248 aa8.97□□□□□ -0.97
CMTM1-219ENST00000533953 SMKR1H3BMG3 65 aa8.96□□□□□ -0.98
CMTM1-219ENST00000533953 BTF3P20290 206 aaKnown RBP8.96□□□□□ -0.98
CMTM1-219ENST00000533953 RAB4AP20338 218 aa8.96□□□□□ -0.98
CMTM1-219ENST00000533953 RIGQ13278 110 aa8.96□□□□□ -0.98
CMTM1-219ENST00000533953 SPATA12Q7Z6I5 190 aa8.96□□□□□ -0.98
CMTM1-219ENST00000533953 Q8N976 141 aa8.96□□□□□ -0.98
CMTM1-219ENST00000533953 A0A087WX48 190 aa8.95□□□□□ -0.98
CMTM1-219ENST00000533953 K7EP13 123 aa8.95□□□□□ -0.98
CMTM1-219ENST00000533953 ADCYAP1P18509 176 aa8.95□□□□□ -0.98
CMTM1-219ENST00000533953 CAMPP49913 170 aa8.95□□□□□ -0.98
CMTM1-219ENST00000533953 MPV17L2Q567V2 206 aa8.95□□□□□ -0.98
CMTM1-219ENST00000533953 MRPL54Q6P161 138 aaKnown RBP8.95□□□□□ -0.98
CMTM1-219ENST00000533953 NFE4Q86UQ8 179 aa8.95□□□□□ -0.98
CMTM1-219ENST00000533953 TMEM191AQ9H0A3 160 aa8.95□□□□□ -0.98
CMTM1-219ENST00000533953 URGCP-MRPS24S4R325 110 aa8.95□□□□□ -0.98
CMTM1-219ENST00000533953 DYNC1H1Q14204 4646 aaKnown RBP8.94□□□□□ -0.98
CMTM1-219ENST00000533953 NCR2O95944 276 aa8.94□□□□□ -0.98
CMTM1-219ENST00000533953 RPS10P46783 165 aaKnown RBP8.94□□□□□ -0.98
CMTM1-219ENST00000533953 ATRAIDQ6UW56 229 aa8.94□□□□□ -0.98
CMTM1-219ENST00000533953 COMMD7Q86VX2 200 aa8.94□□□□□ -0.98
CMTM1-219ENST00000533953 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.94□□□□□ -0.98
CMTM1-219ENST00000533953 TRBV25-1A0A075B6N4 114 aa8.93□□□□□ -0.98
CMTM1-219ENST00000533953 A0A087WTM6 91 aa8.93□□□□□ -0.98
CMTM1-219ENST00000533953 TMEM218A2RU14 115 aa8.93□□□□□ -0.98
CMTM1-219ENST00000533953 UBE2WQ96B02 151 aa8.93□□□□□ -0.98
CMTM1-219ENST00000533953 IGHV1-24A0A0C4DH33 117 aa8.92□□□□□ -0.98
CMTM1-219ENST00000533953 PSCAO43653 123 aa8.92□□□□□ -0.98
CMTM1-219ENST00000533953 RBX1P62877 108 aa8.92□□□□□ -0.98
CMTM1-219ENST00000533953 WFDC2Q14508 124 aa8.92□□□□□ -0.98
CMTM1-219ENST00000533953 IQCJQ1A5X6 159 aa8.92□□□□□ -0.98
CMTM1-219ENST00000533953 CLPSL2Q6UWE3 100 aa8.92□□□□□ -0.98
CMTM1-219ENST00000533953 ENHOQ6UWT2 76 aa8.92□□□□□ -0.98
CMTM1-219ENST00000533953 MAPKAPK5-AS1Q8N8E1 139 aa8.92□□□□□ -0.98
CMTM1-219ENST00000533953 LRCOL1A6NCL2 159 aa8.91□□□□□ -0.98
CMTM1-219ENST00000533953 SDHAF1A6NFY7 115 aa8.91□□□□□ -0.98
CMTM1-219ENST00000533953 C16orf90A8MZG2 172 aa8.91□□□□□ -0.98
CMTM1-219ENST00000533953 F8W036 122 aa8.91□□□□□ -0.98
CMTM1-219ENST00000533953 LECT2O14960 151 aa8.91□□□□□ -0.98
CMTM1-219ENST00000533953 ANGP03950 147 aaKnown RBP8.91□□□□□ -0.98
CMTM1-219ENST00000533953 AMTP48728 403 aa8.91□□□□□ -0.98
CMTM1-219ENST00000533953 COTL1Q14019 142 aa8.91□□□□□ -0.98
CMTM1-219ENST00000533953 MRPL51Q4U2R6 128 aaKnown RBP8.91□□□□□ -0.98
CMTM1-219ENST00000533953 TMEM97Q5BJF2 176 aa8.91□□□□□ -0.98
CMTM1-219ENST00000533953 KCNIP4Q6PIL6 250 aa8.91□□□□□ -0.98
CMTM1-219ENST00000533953 UQCC3Q6UW78 93 aa8.91□□□□□ -0.98
CMTM1-219ENST00000533953 TMEM243Q9BU79 118 aa8.91□□□□□ -0.98
CMTM1-219ENST00000533953 TRAV8-3A0A0A6YYJ7 113 aa8.9□□□□□ -0.98
CMTM1-219ENST00000533953 A0A1B0GXF2 115 aa8.9□□□□□ -0.98
CMTM1-219ENST00000533953 MT-ND4LP03901 98 aa8.9□□□□□ -0.98
CMTM1-219ENST00000533953 PMCHP20382 165 aa8.9□□□□□ -0.98
CMTM1-219ENST00000533953 PNRC1Q12796 327 aaPredicted RBP8.9□□□□□ -0.98
CMTM1-219ENST00000533953 LAGE3Q14657 143 aa8.9□□□□□ -0.98
CMTM1-219ENST00000533953 FAM104BQ5XKR9 115 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms