RNA–Protein interactions for RNA: ENST00000533931.1

CTTN-215, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-215ENST00000533931 RNF185Q96GF1 192 aa10.79□□□□□ -0.68
CTTN-215ENST00000533931 NIT2Q9NQR4 276 aa10.79□□□□□ -0.68
CTTN-215ENST00000533931 GAGE12JA6NER3 117 aa10.78□□□□□ -0.68
CTTN-215ENST00000533931 PPBPP02775 128 aa10.78□□□□□ -0.68
CTTN-215ENST00000533931 UBE2D3P61077 147 aa10.78□□□□□ -0.68
CTTN-215ENST00000533931 UBE2D2P62837 147 aa10.78□□□□□ -0.68
CTTN-215ENST00000533931 GAGE1Q13065 139 aa10.78□□□□□ -0.68
CTTN-215ENST00000533931 GAGE4Q13068 117 aa10.78□□□□□ -0.68
CTTN-215ENST00000533931 GAGE5Q13069 117 aa10.78□□□□□ -0.68
CTTN-215ENST00000533931 GAGE13Q4V321 117 aa10.78□□□□□ -0.68
CTTN-215ENST00000533931 AMN1Q8IY45 258 aa10.78□□□□□ -0.68
CTTN-215ENST00000533931 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.78□□□□□ -0.68
CTTN-215ENST00000533931 ATP6V0E2Q8NHE4 81 aa10.78□□□□□ -0.68
CTTN-215ENST00000533931 UPK3BQ9BT76 320 aa10.78□□□□□ -0.68
CTTN-215ENST00000533931 TRBV24-1A0A075B6N3 115 aa10.77□□□□□ -0.69
CTTN-215ENST00000533931 TRBV6-5A0A0K0K1A5 114 aa10.77□□□□□ -0.69
CTTN-215ENST00000533931 TMEM97Q5BJF2 176 aa10.77□□□□□ -0.69
CTTN-215ENST00000533931 LYPD5Q6UWN5 251 aa10.77□□□□□ -0.69
CTTN-215ENST00000533931 DAZ4Q86SG3 579 aaKnown RBP10.77□□□□□ -0.69
CTTN-215ENST00000533931 ZNRF2Q8NHG8 242 aa10.77□□□□□ -0.69
CTTN-215ENST00000533931 GTSF1LQ9H1H1 148 aa10.77□□□□□ -0.69
CTTN-215ENST00000533931 DAZ3Q9NR90 486 aaKnown RBP10.77□□□□□ -0.69
CTTN-215ENST00000533931 MRPS16Q9Y3D3 137 aaKnown RBP10.77□□□□□ -0.69
CTTN-215ENST00000533931 TNFRSF18Q9Y5U5 241 aa10.77□□□□□ -0.69
CTTN-215ENST00000533931 PLECQ15149 4684 aaKnown RBP10.76□□□□□ -0.69
CTTN-215ENST00000533931 LCE6AA0A183 80 aa10.76□□□□□ -0.69
CTTN-215ENST00000533931 ESRGQ1W209 222 aa10.76□□□□□ -0.69
CTTN-215ENST00000533931 ATRAIDQ6UW56 229 aa10.76□□□□□ -0.69
CTTN-215ENST00000533931 SMCO4Q9NRQ5 59 aa10.76□□□□□ -0.69
CTTN-215ENST00000533931 Q9UF83 564 aa10.76□□□□□ -0.69
CTTN-215ENST00000533931 URGCP-MRPS24S4R325 110 aa10.76□□□□□ -0.69
CTTN-215ENST00000533931 HLA-DQA1P01909 254 aa10.75□□□□□ -0.69
CTTN-215ENST00000533931 MT-ND6P03923 174 aa10.75□□□□□ -0.69
CTTN-215ENST00000533931 ELOBQ15370 118 aa10.75□□□□□ -0.69
CTTN-215ENST00000533931 MRPL51Q4U2R6 128 aaKnown RBP10.75□□□□□ -0.69
CTTN-215ENST00000533931 UBE2DNLQ8IWF7 75 aa10.75□□□□□ -0.69
CTTN-215ENST00000533931 GNB1LQ9BYB4 327 aa10.75□□□□□ -0.69
CTTN-215ENST00000533931 LINC00588Q9Y4M8 146 aa10.75□□□□□ -0.69
CTTN-215ENST00000533931 TRAV26-2A0A0B4J265 109 aa10.74□□□□□ -0.69
CTTN-215ENST00000533931 PHOX2AO14813 284 aa10.74□□□□□ -0.69
CTTN-215ENST00000533931 TMEM136Q6ZRR5 245 aa10.74□□□□□ -0.69
CTTN-215ENST00000533931 LAMTOR2Q9Y2Q5 125 aa10.74□□□□□ -0.69
CTTN-215ENST00000533931 OR10J3Q5JRS4 329 aa10.73□□□□□ -0.69
CTTN-215ENST00000533931 LELP1Q5T871 98 aa10.73□□□□□ -0.69
CTTN-215ENST00000533931 YPEL4Q96NS1 127 aa10.73□□□□□ -0.69
CTTN-215ENST00000533931 S100A1P23297 94 aa10.72□□□□□ -0.69
CTTN-215ENST00000533931 CKS2P33552 79 aa10.72□□□□□ -0.69
CTTN-215ENST00000533931 RPL32P62910 135 aaKnown RBP10.72□□□□□ -0.69
CTTN-215ENST00000533931 ORMDL3Q8N138 153 aa10.72□□□□□ -0.69
CTTN-215ENST00000533931 NRACQ8N912 160 aa10.72□□□□□ -0.69
CTTN-215ENST00000533931 C20orf78Q9BR46 151 aa10.72□□□□□ -0.69
CTTN-215ENST00000533931 LY6G6CO95867 125 aa10.71□□□□□ -0.69
CTTN-215ENST00000533931 RPL39LQ96EH5 51 aaKnown RBP10.71□□□□□ -0.69
CTTN-215ENST00000533931 ST20Q9HBF5 79 aa10.71□□□□□ -0.69
CTTN-215ENST00000533931 ALMS1Q8TCU4 4167 aa10.7□□□□□ -0.7
CTTN-215ENST00000533931 TRAV8-6A0A0B4J262 113 aa10.7□□□□□ -0.7
CTTN-215ENST00000533931 SDHAF1A6NFY7 115 aa10.7□□□□□ -0.7
CTTN-215ENST00000533931 D6R8Y8 96 aa10.7□□□□□ -0.7
CTTN-215ENST00000533931 K7EP13 123 aa10.7□□□□□ -0.7
CTTN-215ENST00000533931 NCR2O95944 276 aa10.7□□□□□ -0.7
CTTN-215ENST00000533931 RPS10P46783 165 aaKnown RBP10.7□□□□□ -0.7
CTTN-215ENST00000533931 TRBV6-8A0A0A6YYG3 113 aa10.69□□□□□ -0.7
CTTN-215ENST00000533931 TGIF2-C20orf24A0A0A6YYL0 155 aa10.69□□□□□ -0.7
CTTN-215ENST00000533931 TRBV27A0A0K0K1C4 114 aa10.69□□□□□ -0.7
CTTN-215ENST00000533931 APCSP02743 223 aa10.69□□□□□ -0.7
CTTN-215ENST00000533931 POLR2KP53803 58 aaKnown RBP10.69□□□□□ -0.7
CTTN-215ENST00000533931 PKIAP61925 76 aa10.69□□□□□ -0.7
CTTN-215ENST00000533931 SUMO2P61956 95 aaKnown RBP10.69□□□□□ -0.7
CTTN-215ENST00000533931 CBLN2Q8IUK8 224 aa10.69□□□□□ -0.7
CTTN-215ENST00000533931 TMEM70Q9BUB7 260 aa10.69□□□□□ -0.7
CTTN-215ENST00000533931 LYSTQ99698 3801 aa10.68□□□□□ -0.7
CTTN-215ENST00000533931 PRSS47A8MTI9 375 aa10.68□□□□□ -0.7
CTTN-215ENST00000533931 SMKR1H3BMG3 65 aa10.68□□□□□ -0.7
CTTN-215ENST00000533931 I3L3M4 83 aa10.68□□□□□ -0.7
CTTN-215ENST00000533931 TCAPO15273 167 aa10.68□□□□□ -0.7
CTTN-215ENST00000533931 GAS8-AS1O95177 125 aa10.68□□□□□ -0.7
CTTN-215ENST00000533931 TNFRSF6BO95407 300 aa10.68□□□□□ -0.7
CTTN-215ENST00000533931 IQCJQ1A5X6 159 aa10.68□□□□□ -0.7
CTTN-215ENST00000533931 VCYO14598 125 aa10.67□□□□□ -0.7
CTTN-215ENST00000533931 SIVA1O15304 175 aa10.67□□□□□ -0.7
CTTN-215ENST00000533931 DNAH10OSP0CZ25 163 aa10.67□□□□□ -0.7
CTTN-215ENST00000533931 COTL1Q14019 142 aa10.67□□□□□ -0.7
CTTN-215ENST00000533931 PRELID3AQ96N28 172 aa10.67□□□□□ -0.7
CTTN-215ENST00000533931 CHCHD7Q9BUK0 85 aa10.67□□□□□ -0.7
CTTN-215ENST00000533931 Q9H8V8 135 aa10.67□□□□□ -0.7
CTTN-215ENST00000533931 TRBV25-1A0A075B6N4 114 aa10.66□□□□□ -0.7
CTTN-215ENST00000533931 IGHV1-24A0A0C4DH33 117 aa10.66□□□□□ -0.7
CTTN-215ENST00000533931 ATP6V1G1O75348 118 aa10.66□□□□□ -0.7
CTTN-215ENST00000533931 TTC32Q5I0X7 151 aa10.66□□□□□ -0.7
CTTN-215ENST00000533931 IGHV3-38A0A0C4DH36 116 aa10.65□□□□□ -0.7
CTTN-215ENST00000533931 NPYP01303 97 aa10.65□□□□□ -0.7
CTTN-215ENST00000533931 BTF3P20290 206 aaKnown RBP10.65□□□□□ -0.7
CTTN-215ENST00000533931 LINC01556Q5JQF7 62 aa10.65□□□□□ -0.7
CTTN-215ENST00000533931 NTM-AS1Q6ZSK4 140 aa10.65□□□□□ -0.7
CTTN-215ENST00000533931 MRPL18Q9H0U6 180 aaKnown RBP10.65□□□□□ -0.7
CTTN-215ENST00000533931 DNAH1Q9P2D7 4330 aa10.65□□□□□ -0.7
CTTN-215ENST00000533931 VPS13DQ5THJ4 4388 aa10.65□□□□□ -0.71
CTTN-215ENST00000533931 PMCHP20382 165 aa10.64□□□□□ -0.71
CTTN-215ENST00000533931 WFDC10BQ8IUB3 73 aa10.64□□□□□ -0.71
CTTN-215ENST00000533931 KIR2DL4Q99706 377 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 96.8 ms