RNA–Protein interactions for RNA: ENST00000533421.2

SF3B2-213, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 407 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-213ENST00000533421 GTSF1LQ9H1H1 148 aa8.33□□□□□ -1.08
SF3B2-213ENST00000533421 A0A087WWC5 75 aa8.32□□□□□ -1.08
SF3B2-213ENST00000533421 TRAV26-2A0A0B4J265 109 aa8.32□□□□□ -1.08
SF3B2-213ENST00000533421 F8W036 122 aa8.32□□□□□ -1.08
SF3B2-213ENST00000533421 CT83Q5H943 113 aa8.32□□□□□ -1.08
SF3B2-213ENST00000533421 LELP1Q5T871 98 aa8.32□□□□□ -1.08
SF3B2-213ENST00000533421 SUMO4Q6EEV6 95 aa8.32□□□□□ -1.08
SF3B2-213ENST00000533421 NUP35Q8NFH5 326 aa8.32□□□□□ -1.08
SF3B2-213ENST00000533421 DEFB104AQ8WTQ1 72 aa8.32□□□□□ -1.08
SF3B2-213ENST00000533421 ABCA13Q86UQ4 5058 aa8.32□□□□□ -1.08
SF3B2-213ENST00000533421 LINC01556Q5JQF7 62 aa8.31□□□□□ -1.08
SF3B2-213ENST00000533421 UQCC3Q6UW78 93 aa8.31□□□□□ -1.08
SF3B2-213ENST00000533421 FAT2Q9NYQ8 4349 aa8.31□□□□□ -1.08
SF3B2-213ENST00000533421 TRGC1P0CF51 173 aa8.3□□□□□ -1.08
SF3B2-213ENST00000533421 RAB4BP61018 213 aa8.3□□□□□ -1.08
SF3B2-213ENST00000533421 SPATA12Q7Z6I5 190 aa8.3□□□□□ -1.08
SF3B2-213ENST00000533421 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.3□□□□□ -1.08
SF3B2-213ENST00000533421 NEXN-AS1Q8NBZ9 246 aa8.3□□□□□ -1.08
SF3B2-213ENST00000533421 CNFNQ9BYD5 112 aa8.3□□□□□ -1.08
SF3B2-213ENST00000533421 A0A1B0GUT8 65 aa8.29□□□□□ -1.08
SF3B2-213ENST00000533421 SMIM27A0A1W2PRY6 76 aa8.29□□□□□ -1.08
SF3B2-213ENST00000533421 PSCAO43653 123 aa8.29□□□□□ -1.08
SF3B2-213ENST00000533421 LINC00694P0DN24 101 aa8.29□□□□□ -1.08
SF3B2-213ENST00000533421 CDPF1Q6NVV7 123 aa8.29□□□□□ -1.08
SF3B2-213ENST00000533421 Q8N3U1 123 aa8.29□□□□□ -1.08
SF3B2-213ENST00000533421 BORCS7Q96B45 105 aa8.29□□□□□ -1.08
SF3B2-213ENST00000533421 GFRA4Q9GZZ7 299 aa8.29□□□□□ -1.08
SF3B2-213ENST00000533421 DPH3P1Q9H4G8 78 aa8.29□□□□□ -1.08
SF3B2-213ENST00000533421 PGPEP1Q9NXJ5 209 aa8.29□□□□□ -1.08
SF3B2-213ENST00000533421 PKHD1P08F94 4074 aa8.29□□□□□ -1.08
SF3B2-213ENST00000533421 TRBV10-1A0A0K0K1A3 114 aa8.28□□□□□ -1.08
SF3B2-213ENST00000533421 GAS8-AS1O95177 125 aa8.28□□□□□ -1.08
SF3B2-213ENST00000533421 RPL36AP83881 106 aaKnown RBP8.28□□□□□ -1.08
SF3B2-213ENST00000533421 MRPL54Q6P161 138 aaKnown RBP8.28□□□□□ -1.08
SF3B2-213ENST00000533421 WDR73Q6P4I2 378 aa8.28□□□□□ -1.08
SF3B2-213ENST00000533421 Q6ZRN7 208 aaPredicted RBP8.28□□□□□ -1.08
SF3B2-213ENST00000533421 RPL36ALQ969Q0 106 aaKnown RBP8.28□□□□□ -1.08
SF3B2-213ENST00000533421 NAT8BQ9UHF3 227 aa8.28□□□□□ -1.08
SF3B2-213ENST00000533421 URGCP-MRPS24S4R325 110 aa8.28□□□□□ -1.08
SF3B2-213ENST00000533421 SMKR1H3BMG3 65 aa8.27□□□□□ -1.09
SF3B2-213ENST00000533421 M0QY20 66 aa8.27□□□□□ -1.09
SF3B2-213ENST00000533421 CDK2AP2O75956 126 aa8.27□□□□□ -1.09
SF3B2-213ENST00000533421 CAMPP49913 170 aa8.27□□□□□ -1.09
SF3B2-213ENST00000533421 PNRC1Q12796 327 aaPredicted RBP8.27□□□□□ -1.09
SF3B2-213ENST00000533421 LAGE3Q14657 143 aa8.27□□□□□ -1.09
SF3B2-213ENST00000533421 KCNIP4Q6PIL6 250 aa8.27□□□□□ -1.09
SF3B2-213ENST00000533421 SLC7A5P1Q8MH63 180 aa8.27□□□□□ -1.09
SF3B2-213ENST00000533421 GATD1Q8NB37 220 aa8.27□□□□□ -1.09
SF3B2-213ENST00000533421 RPL39LQ96EH5 51 aaKnown RBP8.27□□□□□ -1.09
SF3B2-213ENST00000533421 DNAH11Q96DT5 4516 aa8.26□□□□□ -1.09
SF3B2-213ENST00000533421 IBA57-AS1B1ANH7 110 aa8.26□□□□□ -1.09
SF3B2-213ENST00000533421 NCR2O95944 276 aa8.26□□□□□ -1.09
SF3B2-213ENST00000533421 MT-ND4LP03901 98 aa8.26□□□□□ -1.09
SF3B2-213ENST00000533421 UBE2D3P61077 147 aa8.26□□□□□ -1.09
SF3B2-213ENST00000533421 UBE2D2P62837 147 aa8.26□□□□□ -1.09
SF3B2-213ENST00000533421 RIGQ13278 110 aa8.26□□□□□ -1.09
SF3B2-213ENST00000533421 AMN1Q8IY45 258 aa8.26□□□□□ -1.09
SF3B2-213ENST00000533421 TM2D2Q9BX73 214 aa8.26□□□□□ -1.09
SF3B2-213ENST00000533421 SEC11CQ9BY50 192 aa8.26□□□□□ -1.09
SF3B2-213ENST00000533421 TRBV7-3A0A075B6L6 115 aa8.25□□□□□ -1.09
SF3B2-213ENST00000533421 FAM231BA6NCW3 169 aa8.25□□□□□ -1.09
SF3B2-213ENST00000533421 IGHV3-30P01768 117 aa8.25□□□□□ -1.09
SF3B2-213ENST00000533421 IGHV3-33P01772 117 aa8.25□□□□□ -1.09
SF3B2-213ENST00000533421 IGHV3-30-3P0DP02 117 aa8.25□□□□□ -1.09
SF3B2-213ENST00000533421 IGHV3-30-5P0DP03 117 aa8.25□□□□□ -1.09
SF3B2-213ENST00000533421 RASL11AQ6T310 242 aa8.25□□□□□ -1.09
SF3B2-213ENST00000533421 SMIM15Q7Z3B0 74 aa8.25□□□□□ -1.09
SF3B2-213ENST00000533421 RNF185Q96GF1 192 aa8.25□□□□□ -1.09
SF3B2-213ENST00000533421 TNFRSF18Q9Y5U5 241 aa8.25□□□□□ -1.09
SF3B2-213ENST00000533421 TRAV8-3A0A0A6YYJ7 113 aa8.24□□□□□ -1.09
SF3B2-213ENST00000533421 PPP1R2P9O14990 202 aa8.24□□□□□ -1.09
SF3B2-213ENST00000533421 PKIAP61925 76 aa8.24□□□□□ -1.09
SF3B2-213ENST00000533421 ELOBQ15370 118 aa8.24□□□□□ -1.09
SF3B2-213ENST00000533421 RMI2Q96E14 147 aa8.24□□□□□ -1.09
SF3B2-213ENST00000533421 CHCHD7Q9BUK0 85 aa8.24□□□□□ -1.09
SF3B2-213ENST00000533421 COX11Q9Y6N1 276 aa8.24□□□□□ -1.09
SF3B2-213ENST00000533421 PKD1P98161 4303 aa8.24□□□□□ -1.09
SF3B2-213ENST00000533421 A0A087WTM6 91 aa8.23□□□□□ -1.09
SF3B2-213ENST00000533421 RAB4AP20338 218 aa8.23□□□□□ -1.09
SF3B2-213ENST00000533421 TMEM97Q5BJF2 176 aa8.23□□□□□ -1.09
SF3B2-213ENST00000533421 C10orf91Q5T1B1 145 aa8.23□□□□□ -1.09
SF3B2-213ENST00000533421 ANAPC16Q96DE5 110 aa8.23□□□□□ -1.09
SF3B2-213ENST00000533421 TMEM191AQ9H0A3 160 aa8.23□□□□□ -1.09
SF3B2-213ENST00000533421 Q9HAA7 133 aa8.23□□□□□ -1.09
SF3B2-213ENST00000533421 DYNC1H1Q14204 4646 aaKnown RBP8.22□□□□□ -1.09
SF3B2-213ENST00000533421 A0A087WX48 190 aa8.22□□□□□ -1.09
SF3B2-213ENST00000533421 A0A1B0GXF2 115 aa8.22□□□□□ -1.09
SF3B2-213ENST00000533421 H7C1H1 209 aa8.22□□□□□ -1.09
SF3B2-213ENST00000533421 RPS10P46783 165 aaKnown RBP8.22□□□□□ -1.09
SF3B2-213ENST00000533421 KRTAP10-2P60368 255 aa8.22□□□□□ -1.09
SF3B2-213ENST00000533421 NTM-AS1Q6ZSK4 140 aa8.22□□□□□ -1.09
SF3B2-213ENST00000533421 CLRN3Q8NCR9 226 aa8.22□□□□□ -1.09
SF3B2-213ENST00000533421 CARHSP1Q9Y2V2 147 aaKnown RBP8.22□□□□□ -1.09
SF3B2-213ENST00000533421 C7orf77A4D0Y5 90 aa8.21□□□□□ -1.1
SF3B2-213ENST00000533421 APOC3P02656 99 aa8.21□□□□□ -1.1
SF3B2-213ENST00000533421 HBBP68871 147 aa8.21□□□□□ -1.1
SF3B2-213ENST00000533421 MRPL51Q4U2R6 128 aaKnown RBP8.21□□□□□ -1.1
SF3B2-213ENST00000533421 NTN5Q8WTR8 489 aaPredicted RBP8.21□□□□□ -1.1
SF3B2-213ENST00000533421 NIT2Q9NQR4 276 aa8.21□□□□□ -1.1
SF3B2-213ENST00000533421 DNAJC30Q96LL9 226 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms