RNA–Protein interactions for RNA: ENST00000533402.5

CSRP1-218, Transcript of cysteine and glycine rich protein 1, humanhuman

TSL 1 (best)

Gene CSRP1, Length 8,475 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSRP1-218ENST00000533402 BRCA2P51587 3418 aa6.13□□□□□ -1.43
CSRP1-218ENST00000533402 MRPS12O15235 138 aaKnown RBP6.13□□□□□ -1.43
CSRP1-218ENST00000533402 HIST2H2BCQ6DN03 193 aa6.13□□□□□ -1.43
CSRP1-218ENST00000533402 HIST2H2BDQ6DRA6 164 aa6.13□□□□□ -1.43
CSRP1-218ENST00000533402 TOMM6Q96B49 74 aa6.13□□□□□ -1.43
CSRP1-218ENST00000533402 AGPAT4-IT1Q9H0P7 198 aa6.13□□□□□ -1.43
CSRP1-218ENST00000533402 CSPG4Q6UVK1 2322 aa6.13□□□□□ -1.43
CSRP1-218ENST00000533402 HIGD2BQ4VC39 106 aa6.13□□□□□ -1.43
CSRP1-218ENST00000533402 RHPN1-AS1Q9BWJ2 59 aa6.13□□□□□ -1.43
CSRP1-218ENST00000533402 LOC107984640A0A0U1RRK4 108 aa6.13□□□□□ -1.43
CSRP1-218ENST00000533402 C11orf86A6NJI1 115 aa6.13□□□□□ -1.43
CSRP1-218ENST00000533402 MRPS36P82909 103 aaKnown RBP6.13□□□□□ -1.43
CSRP1-218ENST00000533402 A0A0J9YXV3 536 aa6.13□□□□□ -1.43
CSRP1-218ENST00000533402 ZNRF2Q8NHG8 242 aa6.13□□□□□ -1.43
CSRP1-218ENST00000533402 KLK9Q9UKQ9 250 aa6.13□□□□□ -1.43
CSRP1-218ENST00000533402 PDE6GP18545 87 aa6.13□□□□□ -1.43
CSRP1-218ENST00000533402 IGKV2D-26A0A0A0MRZ7 120 aa6.12□□□□□ -1.43
CSRP1-218ENST00000533402 BLCAPP62952 87 aa6.12□□□□□ -1.43
CSRP1-218ENST00000533402 ARTNQ5T4W7 220 aa6.12□□□□□ -1.43
CSRP1-218ENST00000533402 VPREB1P12018 145 aa6.12□□□□□ -1.43
CSRP1-218ENST00000533402 BRD3OSQ6XYD6 125 aa6.12□□□□□ -1.43
CSRP1-218ENST00000533402 TEX36Q5VZQ5 186 aa6.12□□□□□ -1.43
CSRP1-218ENST00000533402 GGNQ86UU5 652 aa6.12□□□□□ -1.43
CSRP1-218ENST00000533402 IGKV1D-17A0A075B6S4 117 aa6.12□□□□□ -1.43
CSRP1-218ENST00000533402 BUB1B-PAK6H3BSN5 160 aa6.12□□□□□ -1.43
CSRP1-218ENST00000533402 CACNA1AO00555 2505 aa6.12□□□□□ -1.43
CSRP1-218ENST00000533402 SPINK13Q1W4C9 94 aa6.12□□□□□ -1.43
CSRP1-218ENST00000533402 LINC00526Q96FQ7 95 aa6.12□□□□□ -1.43
CSRP1-218ENST00000533402 SMAD5-AS1Q9Y6J3 95 aa6.12□□□□□ -1.43
CSRP1-218ENST00000533402 WT1-ASQ06250 92 aa6.11□□□□□ -1.43
CSRP1-218ENST00000533402 WDR86Q86TI4 376 aa6.11□□□□□ -1.43
CSRP1-218ENST00000533402 P0DMU3 169 aa6.11□□□□□ -1.43
CSRP1-218ENST00000533402 FAM231AP0DMU4 169 aa6.11□□□□□ -1.43
CSRP1-218ENST00000533402 FAM231CP0DMU5 169 aa6.11□□□□□ -1.43
CSRP1-218ENST00000533402 C2orf91Q6ZV80 131 aa6.11□□□□□ -1.43
CSRP1-218ENST00000533402 COX7A2LO14548 114 aa6.11□□□□□ -1.43
CSRP1-218ENST00000533402 MSRB1Q9NZV6 116 aa6.11□□□□□ -1.43
CSRP1-218ENST00000533402 IGHV4-4A0A075B6R2 117 aa6.11□□□□□ -1.43
CSRP1-218ENST00000533402 SPART-AS1P0CW21 52 aa6.11□□□□□ -1.43
CSRP1-218ENST00000533402 C17orf77Q96MU5 243 aa6.11□□□□□ -1.43
CSRP1-218ENST00000533402 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.11□□□□□ -1.43
CSRP1-218ENST00000533402 IGKV2-29A2NJV5 120 aaPredicted RBP6.11□□□□□ -1.43
CSRP1-218ENST00000533402 UFSP1Q6NVU6 142 aa6.11□□□□□ -1.43
CSRP1-218ENST00000533402 ZNF134P52741 427 aa6.1□□□□□ -1.43
CSRP1-218ENST00000533402 ZFHX2Q9C0A1 2572 aaPredicted RBP6.1□□□□□ -1.43
CSRP1-218ENST00000533402 LAMA2P24043 3122 aaKnown RBP6.1□□□□□ -1.43
CSRP1-218ENST00000533402 MYO18BQ8IUG5 2567 aa6.1□□□□□ -1.43
CSRP1-218ENST00000533402 PRO3102Q9H379 93 aa6.1□□□□□ -1.43
CSRP1-218ENST00000533402 RPL39P62891 51 aaKnown RBP6.1□□□□□ -1.43
CSRP1-218ENST00000533402 PIK3CD-AS1Q5SR53 167 aa6.1□□□□□ -1.43
CSRP1-218ENST00000533402 TP53TG3Q9ULZ0 132 aa6.1□□□□□ -1.43
CSRP1-218ENST00000533402 MIAQ16674 131 aa6.09□□□□□ -1.43
CSRP1-218ENST00000533402 GAFA1Q96PS6 74 aa6.09□□□□□ -1.43
CSRP1-218ENST00000533402 PRRC2CQ9Y520 2896 aaKnown RBP6.09□□□□□ -1.43
CSRP1-218ENST00000533402 ZNRD1Q9P1U0 126 aa6.09□□□□□ -1.43
CSRP1-218ENST00000533402 TRIAP1O43715 76 aa6.09□□□□□ -1.43
CSRP1-218ENST00000533402 UBE2AP49459 152 aa6.09□□□□□ -1.44
CSRP1-218ENST00000533402 TIMM17AQ99595 171 aa6.09□□□□□ -1.44
CSRP1-218ENST00000533402 DEFB131AP59861 70 aa6.09□□□□□ -1.44
CSRP1-218ENST00000533402 A0A1B0GXF2 115 aa6.08□□□□□ -1.44
CSRP1-218ENST00000533402 LY6G6EA0A0G2JKS1 128 aa6.08□□□□□ -1.44
CSRP1-218ENST00000533402 GNRH2O43555 120 aa6.08□□□□□ -1.44
CSRP1-218ENST00000533402 U3KQA8 63 aa6.08□□□□□ -1.44
CSRP1-218ENST00000533402 IGKV2D-24A0A075B6R9 120 aa6.08□□□□□ -1.44
CSRP1-218ENST00000533402 BPY2O14599 106 aa6.08□□□□□ -1.44
CSRP1-218ENST00000533402 IGFL2Q6UWQ7 119 aa6.08□□□□□ -1.44
CSRP1-218ENST00000533402 Q8TCH9 128 aa6.08□□□□□ -1.44
CSRP1-218ENST00000533402 SPRY4Q9C004 299 aa6.08□□□□□ -1.44
CSRP1-218ENST00000533402 TRBV30A0A0K0K1B3 111 aa6.08□□□□□ -1.44
CSRP1-218ENST00000533402 TIRAPP58753 221 aa6.08□□□□□ -1.44
CSRP1-218ENST00000533402 LYNX1G3V0Z9 82 aa6.08□□□□□ -1.44
CSRP1-218ENST00000533402 LYNX1P0DP58 116 aa6.08□□□□□ -1.44
CSRP1-218ENST00000533402 BPTFQ12830 3046 aa6.08□□□□□ -1.44
CSRP1-218ENST00000533402 NDUFB1O75438 58 aa6.08□□□□□ -1.44
CSRP1-218ENST00000533402 XCL1P47992 114 aa6.08□□□□□ -1.44
CSRP1-218ENST00000533402 ZNF833PQ6ZTB9 187 aa6.08□□□□□ -1.44
CSRP1-218ENST00000533402 MRPL36Q9P0J6 103 aaKnown RBP6.07□□□□□ -1.44
CSRP1-218ENST00000533402 IGHV1-58A0A0C4DH39 117 aa6.07□□□□□ -1.44
CSRP1-218ENST00000533402 CCL24O00175 119 aa6.07□□□□□ -1.44
CSRP1-218ENST00000533402 SOSTDC1Q6X4U4 206 aa6.07□□□□□ -1.44
CSRP1-218ENST00000533402 B3GALT5-AS1P59052 145 aa6.07□□□□□ -1.44
CSRP1-218ENST00000533402 OVOL3O00110 214 aa6.07□□□□□ -1.44
CSRP1-218ENST00000533402 GP9P14770 177 aa6.07□□□□□ -1.44
CSRP1-218ENST00000533402 PTPN13Q12923 2485 aa6.07□□□□□ -1.44
CSRP1-218ENST00000533402 IGHV3-30-3P0DP02 117 aa6.07□□□□□ -1.44
CSRP1-218ENST00000533402 GDF5OSQ5U4N7 250 aa6.07□□□□□ -1.44
CSRP1-218ENST00000533402 MRPL53Q96EL3 112 aaKnown RBP6.07□□□□□ -1.44
CSRP1-218ENST00000533402 ZNF491Q8N8L2 437 aa6.06□□□□□ -1.44
CSRP1-218ENST00000533402 IGHV3-33P01772 117 aa6.06□□□□□ -1.44
CSRP1-218ENST00000533402 CFHR3Q02985 330 aa6.06□□□□□ -1.44
CSRP1-218ENST00000533402 MAPKAPK5-AS1Q8N8E1 139 aa6.06□□□□□ -1.44
CSRP1-218ENST00000533402 LENEPQ9Y5L5 61 aa6.06□□□□□ -1.44
CSRP1-218ENST00000533402 TRBV27A0A0K0K1C4 114 aa6.06□□□□□ -1.44
CSRP1-218ENST00000533402 LOXP28300 417 aaPredicted RBP6.06□□□□□ -1.44
CSRP1-218ENST00000533402 RNF138Q8WVD3 245 aa6.06□□□□□ -1.44
CSRP1-218ENST00000533402 A0A0J9YXY3 114 aa6.06□□□□□ -1.44
CSRP1-218ENST00000533402 SPRY2O43597 315 aa6.06□□□□□ -1.44
CSRP1-218ENST00000533402 FAM19A3Q7Z5A8 133 aa6.06□□□□□ -1.44
CSRP1-218ENST00000533402 FAM167A-AS1Q96KT0 104 aa6.06□□□□□ -1.44
CSRP1-218ENST00000533402 MYCNOSP40205 109 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms