RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 MRPL54Q6P161 138 aaKnown RBP7.86□□□□□ -1.15
TRAPPC4-211ENST00000533012 TMEM136Q6ZRR5 245 aa7.86□□□□□ -1.15
TRAPPC4-211ENST00000533012 C14orf178Q8N769 122 aaPredicted RBP7.86□□□□□ -1.15
TRAPPC4-211ENST00000533012 NUP35Q8NFH5 326 aa7.86□□□□□ -1.15
TRAPPC4-211ENST00000533012 VSIG2Q96IQ7 327 aa7.86□□□□□ -1.15
TRAPPC4-211ENST00000533012 AP1S3Q96PC3 154 aa7.86□□□□□ -1.15
TRAPPC4-211ENST00000533012 CNFNQ9BYD5 112 aa7.86□□□□□ -1.15
TRAPPC4-211ENST00000533012 UFSP1Q6NVU6 142 aa7.85□□□□□ -1.15
TRAPPC4-211ENST00000533012 SMIM15Q7Z3B0 74 aa7.85□□□□□ -1.15
TRAPPC4-211ENST00000533012 BAGE3Q86Y29 109 aa7.85□□□□□ -1.15
TRAPPC4-211ENST00000533012 SLC25A29Q8N8R3 303 aa7.85□□□□□ -1.15
TRAPPC4-211ENST00000533012 OR10D4PQ8NGN7 298 aa7.85□□□□□ -1.15
TRAPPC4-211ENST00000533012 PRADC1Q9BSG0 188 aa7.85□□□□□ -1.15
TRAPPC4-211ENST00000533012 MSRB1Q9NZV6 116 aa7.85□□□□□ -1.15
TRAPPC4-211ENST00000533012 A0A1B0GUT8 65 aa7.84□□□□□ -1.15
TRAPPC4-211ENST00000533012 F5H697 171 aa7.84□□□□□ -1.15
TRAPPC4-211ENST00000533012 ESDP10768 282 aa7.84□□□□□ -1.15
TRAPPC4-211ENST00000533012 RHOHQ15669 191 aa7.84□□□□□ -1.15
TRAPPC4-211ENST00000533012 MRPL23Q16540 153 aaKnown RBP7.84□□□□□ -1.15
TRAPPC4-211ENST00000533012 Q6ZSN1 163 aa7.84□□□□□ -1.15
TRAPPC4-211ENST00000533012 HIST1H2BLQ99880 126 aa7.84□□□□□ -1.15
TRAPPC4-211ENST00000533012 ICOSQ9Y6W8 199 aa7.84□□□□□ -1.15
TRAPPC4-211ENST00000533012 MUC4Q99102 2169 aa7.84□□□□□ -1.15
TRAPPC4-211ENST00000533012 A0A096LPF7 62 aa7.83□□□□□ -1.16
TRAPPC4-211ENST00000533012 A0A1B0GXF2 115 aa7.83□□□□□ -1.16
TRAPPC4-211ENST00000533012 P0DMU3 169 aa7.83□□□□□ -1.16
TRAPPC4-211ENST00000533012 FAM231AP0DMU4 169 aa7.83□□□□□ -1.16
TRAPPC4-211ENST00000533012 FAM231CP0DMU5 169 aa7.83□□□□□ -1.16
TRAPPC4-211ENST00000533012 GYPEP15421 78 aa7.83□□□□□ -1.16
TRAPPC4-211ENST00000533012 EVI2AP22794 236 aa7.83□□□□□ -1.16
TRAPPC4-211ENST00000533012 NIT2Q9NQR4 276 aa7.83□□□□□ -1.16
TRAPPC4-211ENST00000533012 KIF25-AS1Q9Y6Z4 181 aa7.83□□□□□ -1.16
TRAPPC4-211ENST00000533012 K7EQD1 137 aa7.82□□□□□ -1.16
TRAPPC4-211ENST00000533012 RAB4AP20338 218 aa7.82□□□□□ -1.16
TRAPPC4-211ENST00000533012 SRIP30626 198 aa7.82□□□□□ -1.16
TRAPPC4-211ENST00000533012 ZNF56Q15929 161 aa7.82□□□□□ -1.16
TRAPPC4-211ENST00000533012 IQCJQ1A5X6 159 aa7.82□□□□□ -1.16
TRAPPC4-211ENST00000533012 PDZD11Q5EBL8 140 aa7.82□□□□□ -1.16
TRAPPC4-211ENST00000533012 LGALS9CQ6DKI2 356 aa7.82□□□□□ -1.16
TRAPPC4-211ENST00000533012 DPH3P1Q9H4G8 78 aa7.82□□□□□ -1.16
TRAPPC4-211ENST00000533012 LOC100131303A0A0U1RQF7 123 aa7.81□□□□□ -1.16
TRAPPC4-211ENST00000533012 LY6G6CO95867 125 aa7.81□□□□□ -1.16
TRAPPC4-211ENST00000533012 MGPP08493 103 aa7.81□□□□□ -1.16
TRAPPC4-211ENST00000533012 CCL18P55774 89 aa7.81□□□□□ -1.16
TRAPPC4-211ENST00000533012 LINC00315P59091 139 aa7.81□□□□□ -1.16
TRAPPC4-211ENST00000533012 JOSD1Q15040 202 aaPredicted RBP7.81□□□□□ -1.16
TRAPPC4-211ENST00000533012 NEGR1Q7Z3B1 354 aa7.81□□□□□ -1.16
TRAPPC4-211ENST00000533012 SH2D6Q7Z4S9 175 aa7.81□□□□□ -1.16
TRAPPC4-211ENST00000533012 TENM2Q9NT68 2774 aa7.81□□□□□ -1.16
TRAPPC4-211ENST00000533012 TRBV10-1A0A0K0K1A3 114 aa7.8□□□□□ -1.16
TRAPPC4-211ENST00000533012 CAMPP49913 170 aa7.8□□□□□ -1.16
TRAPPC4-211ENST00000533012 UBE2DNLQ8IWF7 75 aa7.8□□□□□ -1.16
TRAPPC4-211ENST00000533012 GATD1Q8NB37 220 aa7.8□□□□□ -1.16
TRAPPC4-211ENST00000533012 LINC00476Q8WZB0 136 aa7.8□□□□□ -1.16
TRAPPC4-211ENST00000533012 LCE6AA0A183 80 aa7.79□□□□□ -1.16
TRAPPC4-211ENST00000533012 GAGE12JA6NER3 117 aa7.79□□□□□ -1.16
TRAPPC4-211ENST00000533012 IFITM10A6NMD0 228 aa7.79□□□□□ -1.16
TRAPPC4-211ENST00000533012 H7C1H1 209 aa7.79□□□□□ -1.16
TRAPPC4-211ENST00000533012 PMCHP20382 165 aa7.79□□□□□ -1.16
TRAPPC4-211ENST00000533012 RPL36AP83881 106 aaKnown RBP7.79□□□□□ -1.16
TRAPPC4-211ENST00000533012 GAGE1Q13065 139 aa7.79□□□□□ -1.16
TRAPPC4-211ENST00000533012 GAGE4Q13068 117 aa7.79□□□□□ -1.16
TRAPPC4-211ENST00000533012 GAGE5Q13069 117 aa7.79□□□□□ -1.16
TRAPPC4-211ENST00000533012 ESRGQ1W209 222 aa7.79□□□□□ -1.16
TRAPPC4-211ENST00000533012 GAGE13Q4V321 117 aa7.79□□□□□ -1.16
TRAPPC4-211ENST00000533012 RPL36ALQ969Q0 106 aaKnown RBP7.79□□□□□ -1.16
TRAPPC4-211ENST00000533012 TMEM191AQ9H0A3 160 aa7.79□□□□□ -1.16
TRAPPC4-211ENST00000533012 TRBV7-3A0A075B6L6 115 aa7.78□□□□□ -1.16
TRAPPC4-211ENST00000533012 TSTD3H0UI37 97 aa7.78□□□□□ -1.16
TRAPPC4-211ENST00000533012 M0QY20 66 aa7.78□□□□□ -1.16
TRAPPC4-211ENST00000533012 SERF1AO75920 110 aa7.78□□□□□ -1.16
TRAPPC4-211ENST00000533012 PYY3Q5JQD4 70 aa7.78□□□□□ -1.16
TRAPPC4-211ENST00000533012 SUMO4Q6EEV6 95 aa7.78□□□□□ -1.16
TRAPPC4-211ENST00000533012 LYPD5Q6UWN5 251 aa7.78□□□□□ -1.16
TRAPPC4-211ENST00000533012 ATP6V0E2Q8NHE4 81 aa7.78□□□□□ -1.16
TRAPPC4-211ENST00000533012 ZNRF2Q8NHG8 242 aa7.78□□□□□ -1.16
TRAPPC4-211ENST00000533012 CHCHD1Q96BP2 118 aaKnown RBP7.78□□□□□ -1.16
TRAPPC4-211ENST00000533012 Q9UF83 564 aa7.78□□□□□ -1.16
TRAPPC4-211ENST00000533012 DNAH1Q9P2D7 4330 aa7.78□□□□□ -1.16
TRAPPC4-211ENST00000533012 VPS13DQ5THJ4 4388 aa7.78□□□□□ -1.16
TRAPPC4-211ENST00000533012 HSBP1O75506 76 aa7.77□□□□□ -1.17
TRAPPC4-211ENST00000533012 DNAJC30Q96LL9 226 aa7.77□□□□□ -1.17
TRAPPC4-211ENST00000533012 ALKBH7Q9BT30 221 aaPredicted RBP7.77□□□□□ -1.17
TRAPPC4-211ENST00000533012 LINC00588Q9Y4M8 146 aa7.77□□□□□ -1.17
TRAPPC4-211ENST00000533012 TNFRSF18Q9Y5U5 241 aa7.77□□□□□ -1.17
TRAPPC4-211ENST00000533012 SACSQ9NZJ4 4579 aa7.77□□□□□ -1.17
TRAPPC4-211ENST00000533012 PCP4L1A6NKN8 68 aa7.76□□□□□ -1.17
TRAPPC4-211ENST00000533012 AMTP48728 403 aa7.76□□□□□ -1.17
TRAPPC4-211ENST00000533012 KIAA1644Q3SXP7 199 aa7.76□□□□□ -1.17
TRAPPC4-211ENST00000533012 NEXN-AS1Q8NBZ9 246 aa7.76□□□□□ -1.17
TRAPPC4-211ENST00000533012 C18orf32Q8TCD1 76 aa7.76□□□□□ -1.17
TRAPPC4-211ENST00000533012 GTSF1LQ9H1H1 148 aa7.76□□□□□ -1.17
TRAPPC4-211ENST00000533012 PPBPP02775 128 aa7.75□□□□□ -1.17
TRAPPC4-211ENST00000533012 TIRAPP58753 221 aa7.75□□□□□ -1.17
TRAPPC4-211ENST00000533012 PKIAP61925 76 aa7.75□□□□□ -1.17
TRAPPC4-211ENST00000533012 FAM104BQ5XKR9 115 aa7.75□□□□□ -1.17
TRAPPC4-211ENST00000533012 AMN1Q8IY45 258 aa7.75□□□□□ -1.17
TRAPPC4-211ENST00000533012 LAMTOR2Q9Y2Q5 125 aa7.75□□□□□ -1.17
TRAPPC4-211ENST00000533012 MRPS16Q9Y3D3 137 aaKnown RBP7.75□□□□□ -1.17
TRAPPC4-211ENST00000533012 ALMS1Q8TCU4 4167 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms