RNA–Protein interactions for RNA: ENST00000532918.4

COLCA1-203, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,366 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-203ENST00000532918 WIPF3A6NGB9 483 aa8.21□□□□□ -1.09
COLCA1-203ENST00000532918 DEFB4AO15263 64 aa8.21□□□□□ -1.09
COLCA1-203ENST00000532918 FOXI1Q12951 378 aa8.21□□□□□ -1.09
COLCA1-203ENST00000532918 RNASE13Q5GAN3 156 aaKnown RBP8.21□□□□□ -1.09
COLCA1-203ENST00000532918 IGLV10-54A0A075B6I4 117 aa8.21□□□□□ -1.1
COLCA1-203ENST00000532918 TRBV10-1A0A0K0K1A3 114 aa8.21□□□□□ -1.1
COLCA1-203ENST00000532918 LINC01545Q5VT33 79 aa8.21□□□□□ -1.1
COLCA1-203ENST00000532918 HIST2H2BCQ6DN03 193 aa8.21□□□□□ -1.1
COLCA1-203ENST00000532918 ACACBO00763 2458 aa8.2□□□□□ -1.1
COLCA1-203ENST00000532918 G3V4G9 280 aa8.2□□□□□ -1.1
COLCA1-203ENST00000532918 PROP1O75360 226 aa8.2□□□□□ -1.1
COLCA1-203ENST00000532918 CRYGBP07316 175 aa8.2□□□□□ -1.1
COLCA1-203ENST00000532918 MBD6Q96DN6 1003 aa8.2□□□□□ -1.1
COLCA1-203ENST00000532918 ODF3Q96PU9 254 aa8.2□□□□□ -1.1
COLCA1-203ENST00000532918 VSIG2Q96IQ7 327 aa8.2□□□□□ -1.1
COLCA1-203ENST00000532918 Q9H8V8 135 aa8.2□□□□□ -1.1
COLCA1-203ENST00000532918 DENND4CQ5VZ89 1909 aa8.2□□□□□ -1.1
COLCA1-203ENST00000532918 H3BQ85 93 aa8.2□□□□□ -1.1
COLCA1-203ENST00000532918 MIFP14174 115 aa8.2□□□□□ -1.1
COLCA1-203ENST00000532918 NDUFB1O75438 58 aa8.19□□□□□ -1.1
COLCA1-203ENST00000532918 WFDC2Q14508 124 aa8.19□□□□□ -1.1
COLCA1-203ENST00000532918 IL15RAQ13261 267 aa8.19□□□□□ -1.1
COLCA1-203ENST00000532918 MPLKIPQ8TAP9 179 aa8.19□□□□□ -1.1
COLCA1-203ENST00000532918 H0YGX0 51 aa8.19□□□□□ -1.1
COLCA1-203ENST00000532918 NREPQ16612 68 aa8.19□□□□□ -1.1
COLCA1-203ENST00000532918 DEFB114Q30KQ6 69 aa8.19□□□□□ -1.1
COLCA1-203ENST00000532918 NDUFC2-KCTD14E9PQ53 114 aa8.19□□□□□ -1.1
COLCA1-203ENST00000532918 LINC01620Q4KN68 170 aa8.19□□□□□ -1.1
COLCA1-203ENST00000532918 PATE2Q6UY27 113 aa8.19□□□□□ -1.1
COLCA1-203ENST00000532918 DKK2Q9UBU2 259 aa8.19□□□□□ -1.1
COLCA1-203ENST00000532918 DEFB131BA0A096LNP1 70 aa8.18□□□□□ -1.1
COLCA1-203ENST00000532918 C10orf91Q5T1B1 145 aa8.18□□□□□ -1.1
COLCA1-203ENST00000532918 COX7B2Q8TF08 81 aa8.18□□□□□ -1.1
COLCA1-203ENST00000532918 KLK12Q9UKR0 248 aa8.18□□□□□ -1.1
COLCA1-203ENST00000532918 UNQ9165/PRO28630Q6UXU0 137 aa8.18□□□□□ -1.1
COLCA1-203ENST00000532918 PTH2Q96A98 100 aa8.18□□□□□ -1.1
COLCA1-203ENST00000532918 PSMG3-AS1Q96PY0 264 aa8.18□□□□□ -1.1
COLCA1-203ENST00000532918 TRBV12-3P01733 135 aa8.17□□□□□ -1.1
COLCA1-203ENST00000532918 CUL9Q8IWT3 2517 aa8.17□□□□□ -1.1
COLCA1-203ENST00000532918 EBI3Q14213 229 aa8.17□□□□□ -1.1
COLCA1-203ENST00000532918 ANKRD39Q53RE8 183 aa8.17□□□□□ -1.1
COLCA1-203ENST00000532918 Q6ZUT4 128 aa8.17□□□□□ -1.1
COLCA1-203ENST00000532918 OTOGLQ3ZCN5 2332 aa8.17□□□□□ -1.1
COLCA1-203ENST00000532918 FAM236DA0A1B0GTK5 79 aa8.17□□□□□ -1.1
COLCA1-203ENST00000532918 UQCRQO14949 82 aa8.17□□□□□ -1.1
COLCA1-203ENST00000532918 FAM236CP0DP71 79 aa8.17□□□□□ -1.1
COLCA1-203ENST00000532918 TRAV10A0A0B4J240 114 aa8.17□□□□□ -1.1
COLCA1-203ENST00000532918 K7ERS5 55 aa8.17□□□□□ -1.1
COLCA1-203ENST00000532918 ODF1Q14990 250 aa8.17□□□□□ -1.1
COLCA1-203ENST00000532918 PCP2Q8IVA1 136 aa8.17□□□□□ -1.1
COLCA1-203ENST00000532918 TRBV6-1A0A0K0K1D8 114 aa8.16□□□□□ -1.1
COLCA1-203ENST00000532918 SPAG11BQ08648 103 aa8.16□□□□□ -1.1
COLCA1-203ENST00000532918 ZNF747Q9BV97 191 aa8.16□□□□□ -1.1
COLCA1-203ENST00000532918 CCDC140Q96MF4 163 aa8.16□□□□□ -1.1
COLCA1-203ENST00000532918 MED13Q9UHV7 2174 aa8.16□□□□□ -1.1
COLCA1-203ENST00000532918 NFE4Q86UQ8 179 aa8.16□□□□□ -1.1
COLCA1-203ENST00000532918 DEFB105AQ8NG35 78 aa8.16□□□□□ -1.1
COLCA1-203ENST00000532918 IGHV4-28A0A0C4DH34 117 aa8.15□□□□□ -1.1
COLCA1-203ENST00000532918 PRAC2D3DTV9 90 aa8.15□□□□□ -1.1
COLCA1-203ENST00000532918 PLXNB3Q9ULL4 1909 aa8.15□□□□□ -1.1
COLCA1-203ENST00000532918 NDUFV3P56181 108 aaKnown RBP8.15□□□□□ -1.1
COLCA1-203ENST00000532918 NOTCH2Q04721 2471 aa8.15□□□□□ -1.11
COLCA1-203ENST00000532918 JMJD7-PLA2G4BH0Y9G9 81 aa8.15□□□□□ -1.11
COLCA1-203ENST00000532918 FAM222AQ5U5X8 452 aa8.15□□□□□ -1.11
COLCA1-203ENST00000532918 LINC00643Q86TS7 51 aa8.15□□□□□ -1.11
COLCA1-203ENST00000532918 LYPD6Q86Y78 171 aa8.15□□□□□ -1.11
COLCA1-203ENST00000532918 RPL39LQ96EH5 51 aaKnown RBP8.15□□□□□ -1.11
COLCA1-203ENST00000532918 LINC01548A6NM66 108 aa8.15□□□□□ -1.11
COLCA1-203ENST00000532918 K7EN84 100 aa8.15□□□□□ -1.11
COLCA1-203ENST00000532918 NDUFA7O95182 113 aa8.15□□□□□ -1.11
COLCA1-203ENST00000532918 B9D2Q9BPU9 175 aa8.15□□□□□ -1.11
COLCA1-203ENST00000532918 NOTCH3Q9UM47 2321 aa8.15□□□□□ -1.11
COLCA1-203ENST00000532918 LINC01006Q8NI28 216 aa8.14□□□□□ -1.11
COLCA1-203ENST00000532918 CDPF1Q6NVV7 123 aa8.14□□□□□ -1.11
COLCA1-203ENST00000532918 H3BT86 120 aa8.14□□□□□ -1.11
COLCA1-203ENST00000532918 K7EQG2 157 aa8.14□□□□□ -1.11
COLCA1-203ENST00000532918 TIMM17AQ99595 171 aa8.14□□□□□ -1.11
COLCA1-203ENST00000532918 TRBV10-2A0A0K0K1G8 114 aa8.14□□□□□ -1.11
COLCA1-203ENST00000532918 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.13□□□□□ -1.11
COLCA1-203ENST00000532918 CRYGDP07320 174 aa8.13□□□□□ -1.11
COLCA1-203ENST00000532918 OPRPNQ99935 248 aaPredicted RBP8.13□□□□□ -1.11
COLCA1-203ENST00000532918 FAM167A-AS1Q96KT0 104 aa8.13□□□□□ -1.11
COLCA1-203ENST00000532918 ZNF702PQ9H963 129 aa8.13□□□□□ -1.11
COLCA1-203ENST00000532918 C20orf197Q8N268 126 aa8.12□□□□□ -1.11
COLCA1-203ENST00000532918 KIR2DL5BQ8NHK3 375 aa8.12□□□□□ -1.11
COLCA1-203ENST00000532918 EML6Q6ZMW3 1958 aa8.12□□□□□ -1.11
COLCA1-203ENST00000532918 COA6Q5JTJ3 125 aaKnown RBP8.12□□□□□ -1.11
COLCA1-203ENST00000532918 C22orf34Q6ZV56 151 aa8.12□□□□□ -1.11
COLCA1-203ENST00000532918 SND1-IT1Q9HBX3 110 aa8.12□□□□□ -1.11
COLCA1-203ENST00000532918 MED13LQ71F56 2210 aa8.11□□□□□ -1.11
COLCA1-203ENST00000532918 E7EUB6 86 aa8.11□□□□□ -1.11
COLCA1-203ENST00000532918 LY6LH3BQJ8 138 aa8.11□□□□□ -1.11
COLCA1-203ENST00000532918 H7C423 109 aa8.11□□□□□ -1.11
COLCA1-203ENST00000532918 OBSL1O75147 1896 aa8.11□□□□□ -1.11
COLCA1-203ENST00000532918 SERTAD4-AS1Q5TG53 156 aa8.11□□□□□ -1.11
COLCA1-203ENST00000532918 IGLV2-14P01704 120 aa8.1□□□□□ -1.11
COLCA1-203ENST00000532918 GATA1P15976 413 aaPredicted RBP8.1□□□□□ -1.11
COLCA1-203ENST00000532918 CTRLP40313 264 aa8.1□□□□□ -1.11
COLCA1-203ENST00000532918 C3orf22Q8N5N4 141 aa8.1□□□□□ -1.11
COLCA1-203ENST00000532918 HIGD1BQ9P298 99 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms