RNA–Protein interactions for RNA: ENST00000531857.1

PKP3-208, Transcript of plakophilin 3, humanhuman

TSL 4

Gene PKP3, Length 687 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-208ENST00000531857 NFE4Q86UQ8 179 aa11.74□□□□□ -0.53
PKP3-208ENST00000531857 SGK494Q96LW2 274 aa11.74□□□□□ -0.53
PKP3-208ENST00000531857 AGPAT4-IT1Q9H0P7 198 aa11.74□□□□□ -0.53
PKP3-208ENST00000531857 APCSP02743 223 aa11.73□□□□□ -0.53
PKP3-208ENST00000531857 CRISP2P16562 243 aa11.73□□□□□ -0.53
PKP3-208ENST00000531857 CRYBA4P53673 196 aa11.73□□□□□ -0.53
PKP3-208ENST00000531857 HAMPP81172 84 aa11.73□□□□□ -0.53
PKP3-208ENST00000531857 PACRGQ96M98 296 aaPredicted RBP11.73□□□□□ -0.53
PKP3-208ENST00000531857 C8orf49Q96NF6 230 aa11.73□□□□□ -0.53
PKP3-208ENST00000531857 PRO0255Q9UI72 69 aa11.73□□□□□ -0.53
PKP3-208ENST00000531857 IGKV2-40A0A087WW87 121 aaPredicted RBP11.72□□□□□ -0.53
PKP3-208ENST00000531857 A0A1B0GUT8 65 aa11.72□□□□□ -0.53
PKP3-208ENST00000531857 A0A1B0GXF2 115 aa11.72□□□□□ -0.53
PKP3-208ENST00000531857 IGKV2D-40P01614 121 aaPredicted RBP11.72□□□□□ -0.53
PKP3-208ENST00000531857 FHL2Q14192 279 aa11.72□□□□□ -0.53
PKP3-208ENST00000531857 DNLZQ5SXM8 178 aa11.72□□□□□ -0.53
PKP3-208ENST00000531857 PRR9Q5T870 116 aa11.72□□□□□ -0.53
PKP3-208ENST00000531857 LINC00518Q8N0U6 118 aa11.72□□□□□ -0.53
PKP3-208ENST00000531857 HIST3H2BBQ8N257 126 aa11.72□□□□□ -0.53
PKP3-208ENST00000531857 TMEM18Q96B42 140 aa11.72□□□□□ -0.53
PKP3-208ENST00000531857 HHLA3Q9XRX5 114 aa11.72□□□□□ -0.53
PKP3-208ENST00000531857 F2Z2F3 143 aa11.71□□□□□ -0.53
PKP3-208ENST00000531857 GPX1P07203 203 aa11.71□□□□□ -0.53
PKP3-208ENST00000531857 GCSHP23434 173 aa11.71□□□□□ -0.53
PKP3-208ENST00000531857 RAB4BP61018 213 aa11.71□□□□□ -0.53
PKP3-208ENST00000531857 MRPL23Q16540 153 aaKnown RBP11.71□□□□□ -0.53
PKP3-208ENST00000531857 WFDC10BQ8IUB3 73 aa11.71□□□□□ -0.53
PKP3-208ENST00000531857 GATD1Q8NB37 220 aa11.71□□□□□ -0.53
PKP3-208ENST00000531857 MSRB1Q9NZV6 116 aa11.71□□□□□ -0.53
PKP3-208ENST00000531857 TRAV9-2A0A087WT02 112 aa11.7□□□□□ -0.54
PKP3-208ENST00000531857 SH2D1AO60880 128 aa11.7□□□□□ -0.54
PKP3-208ENST00000531857 ESDP10768 282 aa11.7□□□□□ -0.54
PKP3-208ENST00000531857 MRPL54Q6P161 138 aaKnown RBP11.7□□□□□ -0.54
PKP3-208ENST00000531857 NEGR1Q7Z3B1 354 aa11.7□□□□□ -0.54
PKP3-208ENST00000531857 ZFAND2AQ8N6M9 145 aa11.7□□□□□ -0.54
PKP3-208ENST00000531857 VGLL1Q99990 258 aa11.7□□□□□ -0.54
PKP3-208ENST00000531857 LINC01559Q495D7 138 aa11.69□□□□□ -0.54
PKP3-208ENST00000531857 IGHV1OR15-1A0A075B7D0 117 aa11.68□□□□□ -0.54
PKP3-208ENST00000531857 CRIP1P50238 77 aa11.68□□□□□ -0.54
PKP3-208ENST00000531857 SLAQ13239 276 aa11.68□□□□□ -0.54
PKP3-208ENST00000531857 GTSF1Q8WW33 167 aa11.68□□□□□ -0.54
PKP3-208ENST00000531857 FAM229AH3BQW9 127 aa11.67□□□□□ -0.54
PKP3-208ENST00000531857 K7EQD1 137 aa11.67□□□□□ -0.54
PKP3-208ENST00000531857 PGLYRP4Q96LB8 373 aa11.67□□□□□ -0.54
PKP3-208ENST00000531857 TRGV4A0A0C4DH28 118 aa11.66□□□□□ -0.54
PKP3-208ENST00000531857 EVI2AP22794 236 aa11.66□□□□□ -0.54
PKP3-208ENST00000531857 BAGE3Q86Y29 109 aa11.66□□□□□ -0.54
PKP3-208ENST00000531857 TRAV21A0A0B4J279 112 aa11.65□□□□□ -0.54
PKP3-208ENST00000531857 SRIP30626 198 aa11.65□□□□□ -0.54
PKP3-208ENST00000531857 CTRLP40313 264 aa11.65□□□□□ -0.54
PKP3-208ENST00000531857 Q6ZSN1 163 aa11.65□□□□□ -0.54
PKP3-208ENST00000531857 ZNF479Q96JC4 524 aa11.65□□□□□ -0.54
PKP3-208ENST00000531857 CNFNQ9BYD5 112 aa11.65□□□□□ -0.54
PKP3-208ENST00000531857 K7EP13 123 aa11.64□□□□□ -0.55
PKP3-208ENST00000531857 ORM1P02763 201 aa11.64□□□□□ -0.55
PKP3-208ENST00000531857 GYPEP15421 78 aa11.64□□□□□ -0.55
PKP3-208ENST00000531857 RAB4AP20338 218 aa11.64□□□□□ -0.55
PKP3-208ENST00000531857 CAMPP49913 170 aa11.64□□□□□ -0.55
PKP3-208ENST00000531857 ZNF415Q09FC8 603 aa11.64□□□□□ -0.55
PKP3-208ENST00000531857 MUC21Q5SSG8 566 aa11.64□□□□□ -0.55
PKP3-208ENST00000531857 FER1L6-AS1Q8NA97 138 aa11.64□□□□□ -0.55
PKP3-208ENST00000531857 Q8TAT8 98 aa11.64□□□□□ -0.55
PKP3-208ENST00000531857 HIST1H2BLQ99880 126 aa11.64□□□□□ -0.55
PKP3-208ENST00000531857 IGLV5-52A0A0A0MRZ9 124 aa11.63□□□□□ -0.55
PKP3-208ENST00000531857 LRCOL1A6NCL2 159 aa11.63□□□□□ -0.55
PKP3-208ENST00000531857 CRYGDP07320 174 aa11.63□□□□□ -0.55
PKP3-208ENST00000531857 IGLC6P0CF74 106 aa11.63□□□□□ -0.55
PKP3-208ENST00000531857 CACNG7P62955 275 aa11.63□□□□□ -0.55
PKP3-208ENST00000531857 C12orf57Q99622 126 aa11.63□□□□□ -0.55
PKP3-208ENST00000531857 FABP4P15090 132 aa11.62□□□□□ -0.55
PKP3-208ENST00000531857 S100A12P80511 92 aa11.62□□□□□ -0.55
PKP3-208ENST00000531857 OR10D4PQ8NGN7 298 aa11.62□□□□□ -0.55
PKP3-208ENST00000531857 TMEM70Q9BUB7 260 aa11.62□□□□□ -0.55
PKP3-208ENST00000531857 J3QL48 77 aa11.61□□□□□ -0.55
PKP3-208ENST00000531857 PMCHP20382 165 aa11.61□□□□□ -0.55
PKP3-208ENST00000531857 SMIM15Q7Z3B0 74 aa11.61□□□□□ -0.55
PKP3-208ENST00000531857 ALKBH7Q9BT30 221 aaPredicted RBP11.61□□□□□ -0.55
PKP3-208ENST00000531857 FAM30AQ9NZY2 134 aa11.61□□□□□ -0.55
PKP3-208ENST00000531857 LOC100131303A0A0U1RQF7 123 aa11.6□□□□□ -0.55
PKP3-208ENST00000531857 IFITM10A6NMD0 228 aa11.6□□□□□ -0.55
PKP3-208ENST00000531857 PPBPP02775 128 aa11.6□□□□□ -0.55
PKP3-208ENST00000531857 OR5AL1P0C617 328 aa11.6□□□□□ -0.55
PKP3-208ENST00000531857 ZNF80P51504 273 aaPredicted RBP11.6□□□□□ -0.55
PKP3-208ENST00000531857 LYZL1Q6UWQ5 148 aa11.6□□□□□ -0.55
PKP3-208ENST00000531857 RASL10AQ92737 203 aa11.6□□□□□ -0.55
PKP3-208ENST00000531857 CHCHD1Q96BP2 118 aaKnown RBP11.6□□□□□ -0.55
PKP3-208ENST00000531857 KCNS1Q96KK3 526 aa11.6□□□□□ -0.55
PKP3-208ENST00000531857 LAMTOR2Q9Y2Q5 125 aa11.6□□□□□ -0.55
PKP3-208ENST00000531857 PSCAO43653 123 aa11.59□□□□□ -0.55
PKP3-208ENST00000531857 ARMS2P0C7Q2 107 aa11.59□□□□□ -0.55
PKP3-208ENST00000531857 C10orf126Q8N4M7 172 aa11.59□□□□□ -0.55
PKP3-208ENST00000531857 SSBP4Q9BWG4 385 aaPredicted RBP11.59□□□□□ -0.55
PKP3-208ENST00000531857 TMEM191AQ9H0A3 160 aa11.59□□□□□ -0.55
PKP3-208ENST00000531857 GZMBP10144 247 aa11.58□□□□□ -0.56
PKP3-208ENST00000531857 JOSD1Q15040 202 aaPredicted RBP11.58□□□□□ -0.56
PKP3-208ENST00000531857 C18orf32Q8TCD1 76 aa11.58□□□□□ -0.56
PKP3-208ENST00000531857 NTN5Q8WTR8 489 aaPredicted RBP11.58□□□□□ -0.56
PKP3-208ENST00000531857 SAMD10Q9BYL1 202 aa11.58□□□□□ -0.56
PKP3-208ENST00000531857 GRIFINA4D1Z8 144 aa11.57□□□□□ -0.56
PKP3-208ENST00000531857 SNAI2O43623 268 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 110.7 ms