RNA–Protein interactions for RNA: ENST00000531594.1

RC3H1-206, Transcript of ring finger and CCCH-type domains 1, humanhuman

TSL 3

Gene RC3H1, Length 303 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1-206ENST00000531594 MYH2Q9UKX2 1941 aa-0.65□□□□□ -2.51
RC3H1-206ENST00000531594 A6NIN4 97 aa-0.65□□□□□ -2.51
RC3H1-206ENST00000531594 E5RI56 91 aa-0.65□□□□□ -2.51
RC3H1-206ENST00000531594 J3KT08 172 aa-0.65□□□□□ -2.51
RC3H1-206ENST00000531594 YPEL1O60688 119 aa-0.65□□□□□ -2.51
RC3H1-206ENST00000531594 E2F6O75461 281 aa-0.65□□□□□ -2.51
RC3H1-206ENST00000531594 S100GP29377 79 aa-0.65□□□□□ -2.51
RC3H1-206ENST00000531594 CMPK1P30085 196 aa-0.65□□□□□ -2.51
RC3H1-206ENST00000531594 DCDP81605 110 aaKnown RBP-0.65□□□□□ -2.51
RC3H1-206ENST00000531594 RBM3P98179 157 aaKnown RBP-0.65□□□□□ -2.51
RC3H1-206ENST00000531594 BAGE3Q86Y29 109 aa-0.65□□□□□ -2.51
RC3H1-206ENST00000531594 RPRMQ9NS64 109 aa-0.65□□□□□ -2.51
RC3H1-206ENST00000531594 C10orf71Q711Q0 1435 aa-0.65□□□□□ -2.51
RC3H1-206ENST00000531594 SPTBN2O15020 2390 aa-0.65□□□□□ -2.51
RC3H1-206ENST00000531594 UBE2G1P62253 170 aa-0.66□□□□□ -2.52
RC3H1-206ENST00000531594 C10orf82Q8WW14 230 aa-0.66□□□□□ -2.52
RC3H1-206ENST00000531594 LSM2Q9Y333 95 aaKnown RBP-0.66□□□□□ -2.52
RC3H1-206ENST00000531594 CASZ1Q86V15 1759 aa-0.66□□□□□ -2.52
RC3H1-206ENST00000531594 DOPEY2Q9Y3R5 2298 aa-0.66□□□□□ -2.52
RC3H1-206ENST00000531594 APC2O95996 2303 aa-0.66□□□□□ -2.52
RC3H1-206ENST00000531594 PLXNA1Q9UIW2 1896 aa-0.67□□□□□ -2.52
RC3H1-206ENST00000531594 SETD2Q9BYW2 2564 aaPredicted RBP-0.67□□□□□ -2.52
RC3H1-206ENST00000531594 DOCK11Q5JSL3 2073 aa-0.67□□□□□ -2.52
RC3H1-206ENST00000531594 PIRTP0C851 137 aa-0.67□□□□□ -2.52
RC3H1-206ENST00000531594 C9orf116Q5BN46 136 aaPredicted RBP-0.67□□□□□ -2.52
RC3H1-206ENST00000531594 LINC01545Q5VT33 79 aa-0.67□□□□□ -2.52
RC3H1-206ENST00000531594 Q5VV11 94 aa-0.67□□□□□ -2.52
RC3H1-206ENST00000531594 FXYD6Q9H0Q3 95 aa-0.67□□□□□ -2.52
RC3H1-206ENST00000531594 TP53AIP1Q9HCN2 124 aa-0.67□□□□□ -2.52
RC3H1-206ENST00000531594 EPPK1P58107 5090 aaKnown RBP-0.67□□□□□ -2.52
RC3H1-206ENST00000531594 OVOS2A0A0G2JMS6 1433 aa-0.67□□□□□ -2.52
RC3H1-206ENST00000531594 EP300Q09472 2414 aaPredicted RBP-0.67□□□□□ -2.52
RC3H1-206ENST00000531594 WDR97A6NE52 1622 aa-0.67□□□□□ -2.52
RC3H1-206ENST00000531594 MYH1P12882 1939 aa-0.68□□□□□ -2.52
RC3H1-206ENST00000531594 ROCK1Q13464 1354 aa-0.68□□□□□ -2.52
RC3H1-206ENST00000531594 STARD9Q9P2P6 4700 aa-0.68□□□□□ -2.52
RC3H1-206ENST00000531594 MYH9P35579 1960 aaKnown RBP-0.68□□□□□ -2.52
RC3H1-206ENST00000531594 FLNBO75369 2602 aaKnown RBP-0.68□□□□□ -2.52
RC3H1-206ENST00000531594 TNFSF15O95150 251 aa-0.68□□□□□ -2.52
RC3H1-206ENST00000531594 SPRR1BP22528 89 aa-0.68□□□□□ -2.52
RC3H1-206ENST00000531594 UBE2D1P51668 147 aa-0.68□□□□□ -2.52
RC3H1-206ENST00000531594 FER1L6Q2WGJ9 1857 aa-0.68□□□□□ -2.52
RC3H1-206ENST00000531594 SPANXN1Q5VSR9 72 aa-0.68□□□□□ -2.52
RC3H1-206ENST00000531594 MIC13Q5XKP0 118 aa-0.68□□□□□ -2.52
RC3H1-206ENST00000531594 TOMM20LQ6UXN7 152 aa-0.68□□□□□ -2.52
RC3H1-206ENST00000531594 SPTSSBQ8NFR3 76 aa-0.68□□□□□ -2.52
RC3H1-206ENST00000531594 MAGOHBQ96A72 148 aaKnown RBP-0.68□□□□□ -2.52
RC3H1-206ENST00000531594 UHRF1BP1LA0JNW5 1464 aa-0.68□□□□□ -2.52
RC3H1-206ENST00000531594 BCL9LQ86UU0 1499 aa-0.68□□□□□ -2.52
RC3H1-206ENST00000531594 KIF13AQ9H1H9 1805 aa-0.68□□□□□ -2.52
RC3H1-206ENST00000531594 MAP1BP46821 2468 aaKnown RBP-0.69□□□□□ -2.52
RC3H1-206ENST00000531594 MYH3P11055 1940 aa-0.69□□□□□ -2.52
RC3H1-206ENST00000531594 ZNF609O15014 1411 aa-0.69□□□□□ -2.52
RC3H1-206ENST00000531594 LAMA2P24043 3122 aaKnown RBP-0.69□□□□□ -2.52
RC3H1-206ENST00000531594 TRBV6-1A0A0K0K1D8 114 aa-0.69□□□□□ -2.52
RC3H1-206ENST00000531594 A0A1B0GV72 72 aa-0.69□□□□□ -2.52
RC3H1-206ENST00000531594 CLPSL1A2RUU4 121 aa-0.69□□□□□ -2.52
RC3H1-206ENST00000531594 M0R129 80 aa-0.69□□□□□ -2.52
RC3H1-206ENST00000531594 NCS1P62166 190 aa-0.69□□□□□ -2.52
RC3H1-206ENST00000531594 RPS28P62857 69 aaKnown RBP-0.69□□□□□ -2.52
RC3H1-206ENST00000531594 PIGYQ3MUY2 71 aa-0.69□□□□□ -2.52
RC3H1-206ENST00000531594 PPP1R2P3Q6NXS1 205 aa-0.69□□□□□ -2.52
RC3H1-206ENST00000531594 TCTE3Q8IZS6 198 aa-0.69□□□□□ -2.52
RC3H1-206ENST00000531594 HIGD1AQ9Y241 93 aa-0.69□□□□□ -2.52
RC3H1-206ENST00000531594 LINC00312Q9Y6C7 94 aa-0.69□□□□□ -2.52
RC3H1-206ENST00000531594 ERCC6Q03468 1493 aa-0.69□□□□□ -2.52
RC3H1-206ENST00000531594 ACANP16112 2415 aa-0.69□□□□□ -2.52
RC3H1-206ENST00000531594 SONP18583 2426 aaKnown RBP-0.69□□□□□ -2.52
RC3H1-206ENST00000531594 FLGP20930 4061 aaPredicted RBP-0.69□□□□□ -2.52
RC3H1-206ENST00000531594 SVEP1Q4LDE5 3571 aa-0.7□□□□□ -2.52
RC3H1-206ENST00000531594 TRBV20-1A0A075B6N2 111 aa-0.7□□□□□ -2.52
RC3H1-206ENST00000531594 TRAV36DV7A0A075B6V5 113 aa-0.7□□□□□ -2.52
RC3H1-206ENST00000531594 CTXND1A0A1B0GTU2 59 aa-0.7□□□□□ -2.52
RC3H1-206ENST00000531594 IFNA17P01571 189 aa-0.7□□□□□ -2.52
RC3H1-206ENST00000531594 FABP1P07148 127 aa-0.7□□□□□ -2.52
RC3H1-206ENST00000531594 SPRR2AP35326 72 aa-0.7□□□□□ -2.52
RC3H1-206ENST00000531594 TFAMQ00059 246 aaKnown RBP-0.7□□□□□ -2.52
RC3H1-206ENST00000531594 S100A7L2Q5SY68 101 aa-0.7□□□□□ -2.52
RC3H1-206ENST00000531594 CTAGE3PQ8IX95 158 aa-0.7□□□□□ -2.52
RC3H1-206ENST00000531594 VSTM2AQ8TAG5 236 aa-0.7□□□□□ -2.52
RC3H1-206ENST00000531594 SKA2Q8WVK7 121 aaPredicted RBP-0.7□□□□□ -2.52
RC3H1-206ENST00000531594 ARAP1Q96P48 1450 aa-0.7□□□□□ -2.52
RC3H1-206ENST00000531594 ERCC6L2Q5T890 1561 aa-0.7□□□□□ -2.52
RC3H1-206ENST00000531594 ZNF142P52746 1687 aaPredicted RBP-0.71□□□□□ -2.52
RC3H1-206ENST00000531594 NRXN2Q9P2S2 1712 aa-0.71□□□□□ -2.52
RC3H1-206ENST00000531594 RYR2Q92736 4967 aa-0.71□□□□□ -2.52
RC3H1-206ENST00000531594 I3L2K1 104 aa-0.71□□□□□ -2.52
RC3H1-206ENST00000531594 M0R2T5 61 aa-0.71□□□□□ -2.52
RC3H1-206ENST00000531594 SPINK4O60575 86 aa-0.71□□□□□ -2.52
RC3H1-206ENST00000531594 COX6B1P14854 86 aa-0.71□□□□□ -2.52
RC3H1-206ENST00000531594 KLK9Q2XQG4 91 aa-0.71□□□□□ -2.52
RC3H1-206ENST00000531594 SAR1AQ9NR31 198 aa-0.71□□□□□ -2.52
RC3H1-206ENST00000531594 R4GMQ9 66 aa-0.71□□□□□ -2.52
RC3H1-206ENST00000531594 KDM5CP41229 1560 aa-0.71□□□□□ -2.52
RC3H1-206ENST00000531594 BIRC6Q9NR09 4857 aa-0.71□□□□□ -2.52
RC3H1-206ENST00000531594 MXRA5Q9NR99 2828 aa-0.72□□□□□ -2.52
RC3H1-206ENST00000531594 PHIPQ8WWQ0 1821 aa-0.72□□□□□ -2.52
RC3H1-206ENST00000531594 RNF213Q63HN8 5207 aa-0.72□□□□□ -2.52
RC3H1-206ENST00000531594 M0R135 149 aa-0.72□□□□□ -2.52
RC3H1-206ENST00000531594 SNCGO76070 127 aa-0.72□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms