RNA–Protein interactions for RNA: ENST00000531270.5

LRRK1-207, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,015 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-207ENST00000531270 HEATR5AQ86XA9 2040 aa11.16□□□□□ -0.62
LRRK1-207ENST00000531270 DEFB131BA0A096LNP1 70 aa11.16□□□□□ -0.62
LRRK1-207ENST00000531270 IGLV2-18A0A075B6J9 118 aa11.16□□□□□ -0.62
LRRK1-207ENST00000531270 K7EMT4 169 aa11.16□□□□□ -0.62
LRRK1-207ENST00000531270 Q6ZTI0 123 aa11.16□□□□□ -0.62
LRRK1-207ENST00000531270 TCF20Q9UGU0 1960 aaKnown RBP11.16□□□□□ -0.62
LRRK1-207ENST00000531270 TRPM7Q96QT4 1865 aa11.16□□□□□ -0.62
LRRK1-207ENST00000531270 KIR2DL5BA0A0G2JN68 375 aa11.16□□□□□ -0.62
LRRK1-207ENST00000531270 KIR2DL5BA0A0G2JPC4 375 aa11.16□□□□□ -0.62
LRRK1-207ENST00000531270 SDIM1Q6ZPB5 146 aa11.16□□□□□ -0.62
LRRK1-207ENST00000531270 KIR2DL5AQ8N109 375 aa11.16□□□□□ -0.62
LRRK1-207ENST00000531270 A0A0U1RQV1 116 aa11.15□□□□□ -0.62
LRRK1-207ENST00000531270 FAM222AQ5U5X8 452 aa11.15□□□□□ -0.62
LRRK1-207ENST00000531270 UFSP1Q6NVU6 142 aa11.15□□□□□ -0.62
LRRK1-207ENST00000531270 ZFAND2AQ8N6M9 145 aa11.15□□□□□ -0.62
LRRK1-207ENST00000531270 HILS1P60008 231 aa11.15□□□□□ -0.62
LRRK1-207ENST00000531270 CHCHD10Q8WYQ3 142 aaPredicted RBP11.15□□□□□ -0.62
LRRK1-207ENST00000531270 IGHV4-30-4P0DP06 118 aa11.15□□□□□ -0.62
LRRK1-207ENST00000531270 IGHV4-31P0DP07 118 aa11.15□□□□□ -0.62
LRRK1-207ENST00000531270 DCANP1Q8TF63 244 aa11.15□□□□□ -0.62
LRRK1-207ENST00000531270 TNRC6BQ9UPQ9 1833 aaKnown RBP11.15□□□□□ -0.62
LRRK1-207ENST00000531270 NOTCH3Q9UM47 2321 aa11.15□□□□□ -0.62
LRRK1-207ENST00000531270 Q8N7P7 452 aa11.15□□□□□ -0.62
LRRK1-207ENST00000531270 KMT2EQ8IZD2 1858 aa11.15□□□□□ -0.62
LRRK1-207ENST00000531270 ACACAQ13085 2346 aa11.15□□□□□ -0.63
LRRK1-207ENST00000531270 WNK2Q9Y3S1 2297 aa11.14□□□□□ -0.63
LRRK1-207ENST00000531270 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.14□□□□□ -0.63
LRRK1-207ENST00000531270 C20orf197Q8N268 126 aa11.14□□□□□ -0.63
LRRK1-207ENST00000531270 C7orf33Q8WU49 177 aa11.13□□□□□ -0.63
LRRK1-207ENST00000531270 INSL3P51460 131 aa11.13□□□□□ -0.63
LRRK1-207ENST00000531270 A0A0J9YX75 114 aa11.13□□□□□ -0.63
LRRK1-207ENST00000531270 IGLV3-1P01715 115 aa11.13□□□□□ -0.63
LRRK1-207ENST00000531270 PDE6GP18545 87 aa11.13□□□□□ -0.63
LRRK1-207ENST00000531270 HIST2H2BDQ6DRA6 164 aa11.12□□□□□ -0.63
LRRK1-207ENST00000531270 C20orf203Q8NBC4 194 aa11.12□□□□□ -0.63
LRRK1-207ENST00000531270 TRBV10-1A0A0K0K1A3 114 aa11.12□□□□□ -0.63
LRRK1-207ENST00000531270 GREB1LQ9C091 1923 aaPredicted RBP11.12□□□□□ -0.63
LRRK1-207ENST00000531270 ENHOQ6UWT2 76 aa11.12□□□□□ -0.63
LRRK1-207ENST00000531270 XAGE1AQ9HD64 81 aa11.12□□□□□ -0.63
LRRK1-207ENST00000531270 MIAQ16674 131 aa11.12□□□□□ -0.63
LRRK1-207ENST00000531270 H3BT86 120 aa11.12□□□□□ -0.63
LRRK1-207ENST00000531270 C1orf158Q8N1D5 194 aa11.12□□□□□ -0.63
LRRK1-207ENST00000531270 LINC00482Q8N8I6 264 aa11.11□□□□□ -0.63
LRRK1-207ENST00000531270 PLCE1Q9P212 2302 aa11.11□□□□□ -0.63
LRRK1-207ENST00000531270 RETNQ9HD89 108 aa11.11□□□□□ -0.63
LRRK1-207ENST00000531270 INAFM1C9JVW0 142 aa11.11□□□□□ -0.63
LRRK1-207ENST00000531270 E7EUB6 86 aa11.11□□□□□ -0.63
LRRK1-207ENST00000531270 MED14OSP0DP75 135 aa11.11□□□□□ -0.63
LRRK1-207ENST00000531270 TCL1BO95988 128 aa11.11□□□□□ -0.63
LRRK1-207ENST00000531270 C3orf84H3BNL1 204 aa11.1□□□□□ -0.63
LRRK1-207ENST00000531270 UBE2D3P61077 147 aa11.1□□□□□ -0.63
LRRK1-207ENST00000531270 NDUFA11Q86Y39 141 aa11.1□□□□□ -0.63
LRRK1-207ENST00000531270 PRR15LQ9BU68 103 aa11.1□□□□□ -0.63
LRRK1-207ENST00000531270 EML6Q6ZMW3 1958 aa11.1□□□□□ -0.63
LRRK1-207ENST00000531270 NACAE9PAV3 2078 aa11.1□□□□□ -0.63
LRRK1-207ENST00000531270 C9orf85Q96MD7 179 aa11.1□□□□□ -0.63
LRRK1-207ENST00000531270 TICRRQ7Z2Z1 1910 aa11.1□□□□□ -0.63
LRRK1-207ENST00000531270 ODF1Q14990 250 aa11.1□□□□□ -0.63
LRRK1-207ENST00000531270 FAM167A-AS1Q96KT0 104 aa11.1□□□□□ -0.63
LRRK1-207ENST00000531270 IGKV2-28A0A075B6P5 120 aa11.09□□□□□ -0.63
LRRK1-207ENST00000531270 IGKV2D-28P01615 120 aa11.09□□□□□ -0.63
LRRK1-207ENST00000531270 ANK1P16157 1881 aa11.09□□□□□ -0.63
LRRK1-207ENST00000531270 HIGD1BQ9P298 99 aa11.09□□□□□ -0.63
LRRK1-207ENST00000531270 LINC00467Q9BRT7 94 aa11.08□□□□□ -0.63
LRRK1-207ENST00000531270 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.08□□□□□ -0.64
LRRK1-207ENST00000531270 A6NDX4 124 aa11.08□□□□□ -0.64
LRRK1-207ENST00000531270 A0A0J9YXY3 114 aa11.08□□□□□ -0.64
LRRK1-207ENST00000531270 CTRLP40313 264 aa11.08□□□□□ -0.64
LRRK1-207ENST00000531270 FRMD6-AS1P0C7T7 363 aa11.07□□□□□ -0.64
LRRK1-207ENST00000531270 WFDC13Q8IUB5 93 aa11.07□□□□□ -0.64
LRRK1-207ENST00000531270 LY6G6CO95867 125 aa11.07□□□□□ -0.64
LRRK1-207ENST00000531270 DAZAP2Q15038 168 aaPredicted RBP11.07□□□□□ -0.64
LRRK1-207ENST00000531270 PRR4Q16378 134 aa11.07□□□□□ -0.64
LRRK1-207ENST00000531270 LINC00643Q86TS7 51 aa11.07□□□□□ -0.64
LRRK1-207ENST00000531270 SERP1Q9Y6X1 66 aa11.07□□□□□ -0.64
LRRK1-207ENST00000531270 IGLV9-49A0A0B4J1Y8 123 aa11.06□□□□□ -0.64
LRRK1-207ENST00000531270 RNASE8Q8TDE3 154 aaKnown RBP11.06□□□□□ -0.64
LRRK1-207ENST00000531270 FAM236DA0A1B0GTK5 79 aa11.06□□□□□ -0.64
LRRK1-207ENST00000531270 TMEM89A2RUT3 159 aa11.06□□□□□ -0.64
LRRK1-207ENST00000531270 LINC01548A6NM66 108 aa11.06□□□□□ -0.64
LRRK1-207ENST00000531270 FAM236CP0DP71 79 aa11.06□□□□□ -0.64
LRRK1-207ENST00000531270 NDUFV3P56181 108 aaKnown RBP11.06□□□□□ -0.64
LRRK1-207ENST00000531270 PIK3CD-AS1Q5SR53 167 aa11.05□□□□□ -0.64
LRRK1-207ENST00000531270 SPTAN1Q13813 2472 aaKnown RBP11.05□□□□□ -0.64
LRRK1-207ENST00000531270 KIAA1671Q9BY89 1806 aa11.05□□□□□ -0.64
LRRK1-207ENST00000531270 LOXL1Q08397 574 aaPredicted RBP11.05□□□□□ -0.64
LRRK1-207ENST00000531270 WDR81Q562E7 1941 aa11.05□□□□□ -0.64
LRRK1-207ENST00000531270 IGFL2Q6UWQ7 119 aa11.04□□□□□ -0.64
LRRK1-207ENST00000531270 LINC00526Q96FQ7 95 aa11.04□□□□□ -0.64
LRRK1-207ENST00000531270 IGLC6P0CF74 106 aa11.04□□□□□ -0.64
LRRK1-207ENST00000531270 LYRM9A8MSI8 78 aa11.04□□□□□ -0.64
LRRK1-207ENST00000531270 CCKP06307 115 aa11.04□□□□□ -0.64
LRRK1-207ENST00000531270 FAM240AA0A1B0GVK7 77 aa11.03□□□□□ -0.64
LRRK1-207ENST00000531270 LY6LH3BQJ8 138 aa11.03□□□□□ -0.64
LRRK1-207ENST00000531270 ZNF80P51504 273 aaPredicted RBP11.03□□□□□ -0.64
LRRK1-207ENST00000531270 ODF3L1Q8IXM7 274 aa11.03□□□□□ -0.64
LRRK1-207ENST00000531270 CCDC140Q96MF4 163 aa11.03□□□□□ -0.64
LRRK1-207ENST00000531270 G3V4G9 280 aa11.03□□□□□ -0.64
LRRK1-207ENST00000531270 CDKN2A-AS1Q9UH64 79 aa11.02□□□□□ -0.65
LRRK1-207ENST00000531270 RPL37AP8A6NKH3 93 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms